RNA–Protein interactions for RNA: ENST00000636775.1

LGI1-223, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,050 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-223	ENST00000636775	PKP1	Q13835	747 aa		11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	ZMYM1	Q5SVZ6	1142 aa		11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	USPL1	Q5W0Q7	1092 aa		11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	PROM2	Q8N271	834 aa		11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	ZSWIM6	Q9HCJ5	1215 aa		11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	CCNL1	Q9UK58	526 aa	Predicted RBP	11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	TAF6L	Q9Y6J9	622 aa		11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	RPS6KA4	O75676	772 aa		11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	ZKSCAN1	P17029	563 aa	Predicted RBP	11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	COL9A3	Q14050	684 aa	Predicted RBP	11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	RUFY3	Q7L099	469 aa		11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	TICAM2	Q86XR7	235 aa		11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	HELLS	Q9NRZ9	838 aa		11.23	□□□□□ -0.61
LGI1-223	ENST00000636775	MROH5	Q6ZUA9	1318 aa		11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	RNF113A	O15541	343 aa	Known RBP	11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	FGFR2	P21802	821 aa		11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	MCAM	P43121	646 aa		11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	ZAP70	P43403	619 aa		11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	NUCB2	P80303	420 aa		11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	CCDC152	Q4G0S7	254 aa		11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	TBC1D9B	Q66K14	1250 aa		11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	PI16	Q6UXB8	463 aa		11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	AMIGO3	Q86WK7	504 aa		11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	HELB	Q8NG08	1087 aa	Predicted RBP	11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	INTS4	Q96HW7	963 aa	Known RBP	11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	MAST3	O60307	1309 aa		11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	MYH15	Q9Y2K3	1946 aa		11.22	□□□□□ -0.61
LGI1-223	ENST00000636775	RGL2	O15211	777 aa		11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	GNPAT	O15228	680 aa		11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	TXNRD1	Q16881	649 aa		11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	ERFE	Q4G0M1	354 aa		11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	VPS53	Q5VIR6	699 aa		11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	CLEC17A	Q6ZS10	378 aa		11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	GBP4	Q96PP9	640 aa		11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	LARP6	Q9BRS8	491 aa	Known RBP	11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	PDRG1	Q9NUG6	133 aa		11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	SRP68	Q9UHB9	627 aa	Known RBP	11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	NARF	Q9UHQ1	456 aa		11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	ZDHHC9	Q9Y397	364 aa		11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	CYP46A1	Q9Y6A2	500 aa		11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	CCDC88A	Q3V6T2	1871 aa		11.21	□□□□□ -0.61
LGI1-223	ENST00000636775	DDX11L8	A8MPP1	907 aa		11.21	□□□□□ -0.62
LGI1-223	ENST00000636775	LARGE1	O95461	756 aa		11.21	□□□□□ -0.62
LGI1-223	ENST00000636775	TSGA10IP	Q3SY00	556 aa		11.21	□□□□□ -0.62
LGI1-223	ENST00000636775	RNF20	Q5VTR2	975 aa		11.21	□□□□□ -0.62
LGI1-223	ENST00000636775	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.21	□□□□□ -0.62
LGI1-223	ENST00000636775	HMG20B	Q9P0W2	317 aa		11.21	□□□□□ -0.62
LGI1-223	ENST00000636775		M0R2C6	588 aa		11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	HSP90B1	P14625	803 aa	Known RBP	11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	PUM3	Q15397	648 aa	Known RBP	11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	BICDL1	Q6ZP65	573 aa		11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	C3orf67	Q6ZVT6	689 aa		11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	MPHOSPH8	Q99549	860 aa		11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	LIMCH1	Q9UPQ0	1083 aa		11.2	□□□□□ -0.62
LGI1-223	ENST00000636775		U3KPZ7	1027 aa	Predicted RBP	11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	PSMA5	P28066	241 aa		11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	ARID4A	P29374	1257 aa	Predicted RBP	11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	PHKA1	P46020	1223 aa		11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	CCDC102B	Q68D86	513 aa		11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	LPIN2	Q92539	896 aa		11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	OSBP2	Q969R2	916 aa		11.2	□□□□□ -0.62
LGI1-223	ENST00000636775	QSER1	Q2KHR3	1735 aa		11.19	□□□□□ -0.62
LGI1-223	ENST00000636775	SNAP23	O00161	211 aa		11.19	□□□□□ -0.62
LGI1-223	ENST00000636775	BAG4	O95429	457 aa	Known RBP	11.19	□□□□□ -0.62
LGI1-223	ENST00000636775	CYP21A2	P08686	494 aa		11.19	□□□□□ -0.62
LGI1-223	ENST00000636775	IGHMBP2	P38935	993 aa	Known RBP	11.19	□□□□□ -0.62
LGI1-223	ENST00000636775	DSCC1	Q9BVC3	393 aa		11.19	□□□□□ -0.62
LGI1-223	ENST00000636775	BRPF3	Q9ULD4	1205 aa		11.19	□□□□□ -0.62
LGI1-223	ENST00000636775	RTCB	Q9Y3I0	505 aa	Known RBP	11.19	□□□□□ -0.62
LGI1-223	ENST00000636775	HSPD1	P10809	573 aa	Known RBP	11.18	□□□□□ -0.62
LGI1-223	ENST00000636775	RPS6KB1	P23443	525 aa		11.18	□□□□□ -0.62
LGI1-223	ENST00000636775	SF3B3	Q15393	1217 aa	Known RBP	11.18	□□□□□ -0.62
LGI1-223	ENST00000636775	BLOC1S2	Q6QNY1	142 aa		11.18	□□□□□ -0.62
LGI1-223	ENST00000636775	ARHGEF1	Q92888	912 aa	Known RBP	11.18	□□□□□ -0.62
LGI1-223	ENST00000636775	TRAK2	O60296	914 aa		11.18	□□□□□ -0.62
LGI1-223	ENST00000636775	ZPR1	O75312	459 aa		11.18	□□□□□ -0.62
LGI1-223	ENST00000636775	ZFY	P08048	801 aa	Predicted RBP	11.18	□□□□□ -0.62
LGI1-223	ENST00000636775	SLC5A1	P13866	664 aa		11.18	□□□□□ -0.62
LGI1-223	ENST00000636775	ST3GAL1	Q11201	340 aa		11.18	□□□□□ -0.62
LGI1-223	ENST00000636775	TCEANC2	Q96MN5	208 aa		11.18	□□□□□ -0.62
LGI1-223	ENST00000636775	LRRC4B	Q9NT99	713 aa		11.18	□□□□□ -0.62
LGI1-223	ENST00000636775		A0A0G2JLW4	131 aa		11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	RRP9	O43818	475 aa	Known RBP	11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	UQCRFS1P1	P0C7P4	283 aa		11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	CHRND	Q07001	517 aa		11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	KRT32	Q14532	448 aa		11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	SLC10A5	Q5PT55	438 aa		11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	STOX1	Q6ZVD7	989 aa		11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	APPBP2	Q92624	585 aa		11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	CDC5L	Q99459	802 aa	Known RBP	11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	PIH1D3	Q9NQM4	214 aa	Known RBP	11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	CACNA1S	Q13698	1873 aa		11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	KIAA1551	Q9HCM1	1747 aa		11.17	□□□□□ -0.62
LGI1-223	ENST00000636775	FOXP2	O15409	715 aa		11.16	□□□□□ -0.62
LGI1-223	ENST00000636775	BRD1	O95696	1058 aa		11.16	□□□□□ -0.62
LGI1-223	ENST00000636775	ADD2	P35612	726 aa		11.16	□□□□□ -0.62
LGI1-223	ENST00000636775	TOB2	Q14106	344 aa	Predicted RBP	11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms