RNA–Protein interactions for RNA: ENST00000636721.1

CACNB4-231, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-231	ENST00000636721	EXOSC10	Q01780	885 aa	Known RBP	11.18	□□□□□ -0.62
CACNB4-231	ENST00000636721	DNM1	Q05193	864 aa	Known RBP	11.18	□□□□□ -0.62
CACNB4-231	ENST00000636721	SMARCC2	Q8TAQ2	1214 aa		11.18	□□□□□ -0.62
CACNB4-231	ENST00000636721	LARP6	Q9BRS8	491 aa	Known RBP	11.18	□□□□□ -0.62
CACNB4-231	ENST00000636721	GDPD2	Q9HCC8	539 aa		11.18	□□□□□ -0.62
CACNB4-231	ENST00000636721	ASAP1	Q9ULH1	1129 aa		11.18	□□□□□ -0.62
CACNB4-231	ENST00000636721	PDE8A	O60658	829 aa		11.17	□□□□□ -0.62
CACNB4-231	ENST00000636721	CYP19A1	P11511	503 aa	Predicted RBP	11.17	□□□□□ -0.62
CACNB4-231	ENST00000636721	NAA16	Q6N069	864 aa	Predicted RBP	11.17	□□□□□ -0.62
CACNB4-231	ENST00000636721	ILDR2	Q71H61	639 aa		11.17	□□□□□ -0.62
CACNB4-231	ENST00000636721	NLRP10	Q86W26	655 aa		11.17	□□□□□ -0.62
CACNB4-231	ENST00000636721	APPBP2	Q92624	585 aa		11.17	□□□□□ -0.62
CACNB4-231	ENST00000636721	XAGE2	Q96GT9	111 aa		11.17	□□□□□ -0.62
CACNB4-231	ENST00000636721	NOL7	Q9UMY1	257 aa	Known RBP	11.17	□□□□□ -0.62
CACNB4-231	ENST00000636721	ROBO1	Q9Y6N7	1651 aa		11.17	□□□□□ -0.62
CACNB4-231	ENST00000636721	DOT1L	Q8TEK3	1739 aa		11.17	□□□□□ -0.62
CACNB4-231	ENST00000636721	COL16A1	Q07092	1604 aa	Predicted RBP	11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	RREB1	Q92766	1687 aa		11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	GOLGA6L4	A6NEF3	574 aa		11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721		H3BQV1	296 aa		11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	DHX16	O60231	1041 aa	Known RBP	11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	UQCRFS1P1	P0C7P4	283 aa		11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	EVC	P57679	992 aa		11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	ATP2B3	Q16720	1220 aa		11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	IMMT	Q16891	758 aa	Known RBP	11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	IFFO2	Q5TF58	517 aa		11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	ZNF594	Q96JF6	807 aa	Predicted RBP	11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	CHAMP1	Q96JM3	812 aa		11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	SEC62	Q99442	399 aa	Known RBP	11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	DDX19A	Q9NUU7	478 aa	Known RBP	11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	RIPOR2	Q9Y4F9	1068 aa		11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	MAST3	O60307	1309 aa		11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	LAMB2	P55268	1798 aa		11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	ZNF831	Q5JPB2	1677 aa		11.16	□□□□□ -0.62
CACNB4-231	ENST00000636721	DDX60	Q8IY21	1712 aa	Known RBP	11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721	NWD2	Q9ULI1	1742 aa		11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721		E7EWF7	191 aa		11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721	CAVIN2	O95810	425 aa		11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721	CTSW	P56202	376 aa		11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721	METTL24	Q5JXM2	366 aa		11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721	LDHAL6A	Q6ZMR3	332 aa		11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721	CCDC129	Q6ZRS4	1044 aa		11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721	TTLL11	Q8NHH1	800 aa		11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721	PUS3	Q9BZE2	481 aa	Known RBP	11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.15	□□□□□ -0.62
CACNB4-231	ENST00000636721	ATRN	O75882	1429 aa		11.15	□□□□□ -0.63
CACNB4-231	ENST00000636721	ZNF500	O60304	480 aa	Predicted RBP	11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	TPM3	P06753	285 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	CCDC192	P0DO97	292 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	TERF1	P54274	439 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	CDC37L1	Q7L3B6	337 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	BRF1	Q92994	677 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	FAM89A	Q96GI7	184 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	SPATA32	Q96LK8	384 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	MROH5	Q6ZUA9	1318 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	NRAP	Q86VF7	1730 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	CHD4	Q14839	1912 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	DOCK2	Q92608	1830 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	LRP5	O75197	1615 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	IRS4	O14654	1257 aa	Predicted RBP	11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	ITGA6	P23229	1130 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	UBE3C	Q15386	1083 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	PARP10	Q53GL7	1025 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	CHRDL2	Q6WN34	429 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	TTC6	Q86TZ1	520 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	ZNF34	Q8IZ26	560 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	ZNF396	Q96N95	335 aa	Predicted RBP	11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	CNNM1	Q9NRU3	951 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	TRMT112	Q9UI30	125 aa	Known RBP	11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	ZKSCAN5	Q9Y2L8	839 aa		11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.14	□□□□□ -0.63
CACNB4-231	ENST00000636721	RIC1	Q4ADV7	1423 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	RGL2	O15211	777 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	CTAGE5	O15320	804 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	PDE8B	O95263	885 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	SCRN1	Q12765	414 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	REST	Q13127	1097 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	STK3	Q13188	491 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	MAP3K11	Q16584	847 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	WASHC4	Q2M389	1173 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	STOX1	Q6ZVD7	989 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	DZIP3	Q86Y13	1208 aa	Known RBP	11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	NCOA7	Q8NI08	942 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	TCEANC2	Q96MN5	208 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	FUCA2	Q9BTY2	467 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	NUP62CL	Q9H1M0	184 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	TBC1D2B	Q9UPU7	963 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	TAF6L	Q9Y6J9	622 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	NDUFB9	Q9Y6M9	179 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	ZMYM6	O95789	1325 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	RTL9	Q8NET4	1388 aa		11.13	□□□□□ -0.63
CACNB4-231	ENST00000636721	PHLPP1	O60346	1717 aa		11.12	□□□□□ -0.63
CACNB4-231	ENST00000636721	ARID4A	P29374	1257 aa	Predicted RBP	11.12	□□□□□ -0.63
CACNB4-231	ENST00000636721	RALYL	Q86SE5	291 aa	Known RBP	11.12	□□□□□ -0.63
CACNB4-231	ENST00000636721	NSUN7	Q8NE18	718 aa	Known RBP	11.12	□□□□□ -0.63
CACNB4-231	ENST00000636721	LEO1	Q8WVC0	666 aa	Predicted RBP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms