RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 SEC13P55735 322 aa7.48□□□□□ -1.21
CLN5-212ENST00000636602 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.48□□□□□ -1.21
CLN5-212ENST00000636602 CCDC39Q9UFE4 941 aa7.48□□□□□ -1.21
CLN5-212ENST00000636602 JUNBP17275 347 aaPredicted RBP7.47□□□□□ -1.21
CLN5-212ENST00000636602 ELOAQ14241 798 aaKnown RBP7.47□□□□□ -1.21
CLN5-212ENST00000636602 DUOXA2Q1HG44 320 aa7.47□□□□□ -1.21
CLN5-212ENST00000636602 FBLN7Q53RD9 439 aa7.47□□□□□ -1.21
CLN5-212ENST00000636602 TXNDC11Q6PKC3 985 aa7.47□□□□□ -1.21
CLN5-212ENST00000636602 NOVA2Q9UNW9 492 aaKnown RBP7.47□□□□□ -1.21
CLN5-212ENST00000636602 IGFBP4P22692 258 aa7.46□□□□□ -1.22
CLN5-212ENST00000636602 MSMPQ1L6U9 139 aa7.46□□□□□ -1.22
CLN5-212ENST00000636602 TMEM164Q5U3C3 297 aa7.46□□□□□ -1.22
CLN5-212ENST00000636602 B4GALNT3Q6L9W6 998 aa7.46□□□□□ -1.22
CLN5-212ENST00000636602 STK32AQ8WU08 396 aa7.46□□□□□ -1.22
CLN5-212ENST00000636602 HINFPQ9BQA5 517 aa7.46□□□□□ -1.22
CLN5-212ENST00000636602 QTRT2Q9H974 415 aaKnown RBP7.46□□□□□ -1.22
CLN5-212ENST00000636602 ZMIZ1Q9ULJ6 1067 aa7.46□□□□□ -1.22
CLN5-212ENST00000636602 IVNS1ABPQ9Y6Y0 642 aa7.46□□□□□ -1.22
CLN5-212ENST00000636602 SART1O43290 800 aaKnown RBP7.45□□□□□ -1.22
CLN5-212ENST00000636602 PRNPP04156 253 aa7.45□□□□□ -1.22
CLN5-212ENST00000636602 C11orf91Q3C1V1 193 aa7.45□□□□□ -1.22
CLN5-212ENST00000636602 LARP1Q6PKG0 1096 aaKnown RBP7.45□□□□□ -1.22
CLN5-212ENST00000636602 NFXL1Q6ZNB6 911 aa7.45□□□□□ -1.22
CLN5-212ENST00000636602 CMTR1Q8N1G2 835 aaKnown RBP7.45□□□□□ -1.22
CLN5-212ENST00000636602 RGS22Q8NE09 1264 aa7.45□□□□□ -1.22
CLN5-212ENST00000636602 MFSD14AQ96MC6 490 aa7.45□□□□□ -1.22
CLN5-212ENST00000636602 FBXL18Q96ME1 805 aa7.45□□□□□ -1.22
CLN5-212ENST00000636602 CARD10Q9BWT7 1032 aa7.45□□□□□ -1.22
CLN5-212ENST00000636602 MTMR7Q9Y216 660 aa7.45□□□□□ -1.22
CLN5-212ENST00000636602 FAM196BA6NMK8 535 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 USP17L15C9J2P7 530 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 USP17L10C9JJH3 530 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 USP17L13C9JLJ4 530 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 USP17L12C9JPN9 530 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 USP17L11C9JVI0 530 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 USP17L21D6R901 530 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 USP17L18D6R9N7 530 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 USP17L22D6RA61 530 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 USP17L17D6RBQ6 530 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 USP17L19D6RCP7 530 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 USP17L20D6RJB6 530 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 USP17L24Q0WX57 530 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 COL19A1Q14993 1142 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 RGL4Q8IZJ4 473 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 KLHL23Q8NBE8 558 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 COL26A1Q96A83 441 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 HIF3AQ9Y2N7 669 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 LEMD3Q9Y2U8 911 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 KCNMB2Q9Y691 235 aa7.44□□□□□ -1.22
CLN5-212ENST00000636602 FSCN2O14926 492 aa7.43□□□□□ -1.22
CLN5-212ENST00000636602 LGR5O75473 907 aa7.43□□□□□ -1.22
CLN5-212ENST00000636602 FOSL1P15407 271 aa7.43□□□□□ -1.22
CLN5-212ENST00000636602 CDC27P30260 824 aa7.43□□□□□ -1.22
CLN5-212ENST00000636602 PREPP48147 710 aa7.43□□□□□ -1.22
CLN5-212ENST00000636602 CRTC2Q53ET0 693 aaPredicted RBP7.43□□□□□ -1.22
CLN5-212ENST00000636602 ANKRD34AQ69YU3 496 aa7.43□□□□□ -1.22
CLN5-212ENST00000636602 TP53INP2Q8IXH6 220 aa7.43□□□□□ -1.22
CLN5-212ENST00000636602 GIMAP7Q8NHV1 300 aa7.43□□□□□ -1.22
CLN5-212ENST00000636602 UBASH3BQ8TF42 649 aa7.43□□□□□ -1.22
CLN5-212ENST00000636602 FOXD4L4Q8WXT5 416 aaPredicted RBP7.43□□□□□ -1.22
CLN5-212ENST00000636602 LACRTQ9GZZ8 138 aa7.43□□□□□ -1.22
CLN5-212ENST00000636602 ATG3Q9NT62 314 aa7.43□□□□□ -1.22
CLN5-212ENST00000636602 DDX3YO15523 660 aaKnown RBP7.42□□□□□ -1.22
CLN5-212ENST00000636602 ADAM11O75078 769 aa7.42□□□□□ -1.22
CLN5-212ENST00000636602 CDC25BP30305 580 aa7.42□□□□□ -1.22
CLN5-212ENST00000636602 SPOCD1Q6ZMY3 1216 aa7.42□□□□□ -1.22
CLN5-212ENST00000636602 VSIG10LQ86VR7 867 aa7.42□□□□□ -1.22
CLN5-212ENST00000636602 ATP11AP98196 1134 aa7.41□□□□□ -1.22
CLN5-212ENST00000636602 PTK7Q13308 1070 aa7.41□□□□□ -1.22
CLN5-212ENST00000636602 CEP135Q66GS9 1140 aa7.41□□□□□ -1.22
CLN5-212ENST00000636602 FAM200AQ8TCP9 573 aa7.41□□□□□ -1.22
CLN5-212ENST00000636602 MYO19Q96H55 970 aa7.41□□□□□ -1.22
CLN5-212ENST00000636602 DBX1A6NMT0 343 aa7.4□□□□□ -1.22
CLN5-212ENST00000636602 F13BP05160 661 aa7.4□□□□□ -1.22
CLN5-212ENST00000636602 ZNF648Q5T619 568 aaPredicted RBP7.4□□□□□ -1.22
CLN5-212ENST00000636602 FAM117BQ6P1L5 589 aa7.4□□□□□ -1.22
CLN5-212ENST00000636602 SND1Q7KZF4 910 aaKnown RBP eCLIP7.4□□□□□ -1.22
CLN5-212ENST00000636602 SMNDC1O75940 238 aaKnown RBP eCLIP7.39□□□□□ -1.23
CLN5-212ENST00000636602 CPSF6Q16630 551 aaKnown RBP eCLIP7.39□□□□□ -1.23
CLN5-212ENST00000636602 CCDC27Q2M243 656 aa7.39□□□□□ -1.23
CLN5-212ENST00000636602 ADAMTSL4Q6UY14 1074 aa7.39□□□□□ -1.23
CLN5-212ENST00000636602 NLRP13Q86W25 1043 aa7.39□□□□□ -1.23
CLN5-212ENST00000636602 TREML1Q86YW5 311 aa7.39□□□□□ -1.23
CLN5-212ENST00000636602 ANKMY2Q8IV38 441 aa7.39□□□□□ -1.23
CLN5-212ENST00000636602 FBXL6Q8N531 539 aa7.39□□□□□ -1.23
CLN5-212ENST00000636602 OSBPL1AQ9BXW6 950 aa7.39□□□□□ -1.23
CLN5-212ENST00000636602 GNEQ9Y223 722 aaKnown RBP7.39□□□□□ -1.23
CLN5-212ENST00000636602 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
CLN5-212ENST00000636602 MAP4P27816 1152 aaKnown RBP7.38□□□□□ -1.23
CLN5-212ENST00000636602 ZNF124Q15973 351 aa7.38□□□□□ -1.23
CLN5-212ENST00000636602 COL13A1Q5TAT6 717 aaPredicted RBP7.38□□□□□ -1.23
CLN5-212ENST00000636602 CCER1Q8TC90 406 aaPredicted RBP7.38□□□□□ -1.23
CLN5-212ENST00000636602 KLHDC7BQ96G42 594 aa7.38□□□□□ -1.23
CLN5-212ENST00000636602 RNF208Q9H0X6 261 aa7.38□□□□□ -1.23
CLN5-212ENST00000636602 EPHA1P21709 976 aa7.37□□□□□ -1.23
CLN5-212ENST00000636602 DPYDQ12882 1025 aa7.37□□□□□ -1.23
CLN5-212ENST00000636602 PHLDB3Q6NSJ2 640 aa7.37□□□□□ -1.23
CLN5-212ENST00000636602 OR13H1Q8NG92 308 aa7.37□□□□□ -1.23
CLN5-212ENST00000636602 SPACA7Q96KW9 195 aa7.37□□□□□ -1.23
CLN5-212ENST00000636602 SEC31BQ9NQW1 1179 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms