RNA–Protein interactions for RNA: ENST00000636512.1

GABRB3-220, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 99 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-220ENST00000636512 IER5Q5VY09 327 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 CCSAPQ6IQ19 270 aaPredicted RBP2.33□□□□□ -2.04
GABRB3-220ENST00000636512 FBXL19Q6PCT2 694 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 POTEAQ6S8J7 498 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 CCDC81Q6ZN84 652 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 KRT26Q7Z3Y9 468 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 KIAA0907Q7Z7F0 614 aaPredicted RBP2.33□□□□□ -2.04
GABRB3-220ENST00000636512 RPUSD2Q8IZ73 545 aaKnown RBP2.33□□□□□ -2.04
GABRB3-220ENST00000636512 LILRB2Q8N423 598 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 MPNDQ8N594 471 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 ZSWIM2Q8NEG5 633 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 ATL2Q8NHH9 583 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 ZDHHC1Q8WTX9 485 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 PMM1Q92871 262 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 RELTQ969Z4 430 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 SGSM3Q96HU1 749 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 SUSD3Q96L08 255 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 RPS6KC1Q96S38 1066 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 OXCT2Q9BYC2 517 aaPredicted RBP2.33□□□□□ -2.04
GABRB3-220ENST00000636512 PRDM16Q9HAZ2 1276 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 ABI2Q9NYB9 513 aaPredicted RBP2.33□□□□□ -2.04
GABRB3-220ENST00000636512 UBP1Q9NZI7 540 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 PRR12Q9ULL5 1215 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 MAPK8IP1Q9UQF2 711 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 ATP8A1Q9Y2Q0 1164 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 RTCBQ9Y3I0 505 aaKnown RBP2.33□□□□□ -2.04
GABRB3-220ENST00000636512 COMMD10Q9Y6G5 202 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 KAT6BQ8WYB5 2073 aa2.33□□□□□ -2.04
GABRB3-220ENST00000636512 CCDC163A0A0D9SF12 145 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 TMEM238LA0A1B0GVL6 79 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 AGRPO00253 132 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 EREGO14944 169 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 TLR3O15455 904 aaKnown RBP2.32□□□□□ -2.04
GABRB3-220ENST00000636512 HRO43593 1189 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 LILRA1O75019 489 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 XYLBO75191 536 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 MYL1P05976 194 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 PMLP29590 882 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 TXLNAP40222 546 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 PTGIRP43119 386 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 RPIAP49247 311 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 LIG3P49916 1009 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 EPHB1P54762 984 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 RHBDL3P58872 404 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 SSRP1Q08945 709 aaKnown RBP2.32□□□□□ -2.04
GABRB3-220ENST00000636512 MLECQ14165 292 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 ARSJQ5FYB0 599 aaPredicted RBP2.32□□□□□ -2.04
GABRB3-220ENST00000636512 ZC3H12BQ5HYM0 836 aaKnown RBP2.32□□□□□ -2.04
GABRB3-220ENST00000636512 RC3H1Q5TC82 1133 aaKnown RBP2.32□□□□□ -2.04
GABRB3-220ENST00000636512 TTBK2Q6IQ55 1244 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 PRPF40BQ6NWY9 871 aaKnown RBP2.32□□□□□ -2.04
GABRB3-220ENST00000636512 TMED8Q6PL24 325 aaPredicted RBP2.32□□□□□ -2.04
GABRB3-220ENST00000636512 TPTE2Q6XPS3 522 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 TSHZ1Q6ZSZ6 1077 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 APBB1IPQ7Z5R6 666 aaPredicted RBP2.32□□□□□ -2.04
GABRB3-220ENST00000636512 NLRP13Q86W25 1043 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 SLITRK4Q8IW52 837 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 C1orf127Q8N9H9 656 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 STAG1Q8WVM7 1258 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 JARID2Q92833 1246 aaPredicted RBP2.32□□□□□ -2.04
GABRB3-220ENST00000636512 CEP63Q96MT8 703 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 IER2Q9BTL4 223 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 MIR1-1HGQ9H1L0 117 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 CAAP1Q9H8G2 361 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 LIN7BQ9HAP6 207 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 TMEM63CQ9P1W3 806 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 PFDN2Q9UHV9 154 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 PPT2Q9UMR5 302 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 TLR6Q9Y2C9 796 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 MSRB2Q9Y3D2 182 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 SLC12A7Q9Y666 1083 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 EID1Q9Y6B2 187 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 USP3Q9Y6I4 520 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 WASF2Q9Y6W5 498 aa2.32□□□□□ -2.04
GABRB3-220ENST00000636512 A0A1W2PP55 124 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 IQCA1LA6NCM1 817 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 GOLGA6CA6NDK9 693 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 GOLGA6BA6NDN3 693 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 FAM177BA6PVY3 158 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 POTECB2RU33 542 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 PPEF1O14829 653 aaPredicted RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 NPHP1O15259 732 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 GREM1O60565 184 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 FBXO24O75426 580 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 ALDH1L1O75891 902 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 RASGRP1O95267 797 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 VIL1P09327 827 aaKnown RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 GOLGA6DP0CG33 693 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 POTEJP0CG39 1038 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 MYCLP1P12525 358 aaPredicted RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 GPC1P35052 558 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 GIPRP48546 466 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 PTPN5P54829 565 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 EVA1CP58658 441 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 RPS26P62854 115 aaKnown RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 PPP2R3AQ06190 1150 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 SEPT6Q14141 434 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 MPP2Q14168 576 aa2.31□□□□□ -2.04
GABRB3-220ENST00000636512 FAM50AQ14320 339 aaKnown RBP2.31□□□□□ -2.04
GABRB3-220ENST00000636512 HLTFQ14527 1009 aaKnown RBP eCLIP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms