RNA–Protein interactions for RNA: ENST00000636193.1

SYNGAP1-213, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-213ENST00000636193 CCDC6Q16204 474 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 SERTAD4-AS1Q5TG53 156 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 MSL1Q68DK7 614 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 DPY19L2Q6NUT2 758 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 SAMD1Q6SPF0 538 aaPredicted RBP0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 LDHDQ86WU2 507 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 SLC16A10Q8TF71 515 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 ADAM2Q99965 735 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 C1QTNF3Q9BXJ4 246 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 CDHR5Q9HBB8 845 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 GABBR1Q9UBS5 961 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 PLA2G2DQ9UNK4 145 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 COG5Q9UP83 839 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 TRIM17Q9Y577 477 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 SHPRHQ149N8 1683 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 ACACAQ13085 2346 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 COL16A1Q07092 1604 aaPredicted RBP0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 PAPPAQ13219 1627 aa0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 TARBP1Q13395 1621 aaKnown RBP0.71□□□□□ -2.3
SYNGAP1-213ENST00000636193 TTC37Q6PGP7 1564 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 ACEP12821 1306 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 SPHKAPQ2M3C7 1700 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 NUP188Q5SRE5 1749 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 FANCAO15360 1455 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 CAMSAP2Q08AD1 1489 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 MLH3Q9UHC1 1453 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 A0A0U1RQV1 116 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 FAM221BA6H8Z2 402 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 MSI1O43347 362 aaKnown RBP0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 LRIG2O94898 1065 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 CLDN9O95484 217 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 ADSSP30520 456 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 ZXDAP98168 799 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 TROAPQ12815 778 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 TRA2AQ13595 282 aaKnown RBP eCLIP0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 TAF1BQ53T94 588 aaPredicted RBP0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 LCE2CQ5TA81 110 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 KRTAP5-4Q6L8H1 288 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 PROSER1Q86XN7 944 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 C7orf61Q8IZ16 206 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 CNTROBQ8N137 903 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 PLD6Q8N2A8 252 aaKnown RBP0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 BEND7Q8N7W2 519 aaPredicted RBP0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 MB21D1Q8N884 522 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 PROCA1Q8NCQ7 364 aaPredicted RBP0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 SLAIN1Q8ND83 568 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 PRR7Q8TB68 274 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 CCER1Q8TC90 406 aaPredicted RBP0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 NUDT8Q8WV74 236 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 ZCCHC13Q8WW36 166 aaKnown RBP0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 TMEM158Q8WZ71 300 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 GATA6Q92908 595 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 ARMC5Q96C12 935 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 SHISA4Q96DD7 197 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 LCORQ96JN0 433 aaPredicted RBP0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 SLC12A9Q9BXP2 914 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 KRTAP4-7Q9BYR0 210 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 NCDNQ9UBB6 729 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 USP18Q9UMW8 372 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 COL11A1P12107 1806 aaPredicted RBP0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 FMN1Q68DA7 1419 aa0.7□□□□□ -2.3
SYNGAP1-213ENST00000636193 MARF1Q9Y4F3 1742 aaKnown RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 MAP3K1Q13233 1512 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 ASXL1Q8IXJ9 1541 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 NRXN1Q9ULB1 1477 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 RAPGEF2Q9Y4G8 1499 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 COL22A1Q8NFW1 1626 aaPredicted RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 PMS2P1A4D2B8 440 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 VPS37CA5D8V6 355 aaPredicted RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 SLC30A4O14863 429 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 HNRNPRO43390 633 aaKnown RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 CAPNS1P04632 268 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 KLRK1P26718 216 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 SMAD3P84022 425 aaKnown RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 COL10A1Q03692 680 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 FAM98CQ17RN3 349 aaKnown RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 HNRNPA1L2Q32P51 320 aaKnown RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 MIDNQ504T8 468 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 EAPPQ56P03 285 aaPredicted RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 IL31Q6EBC2 164 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 KLHDC10Q6PID8 442 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 SPNS3Q6ZMD2 512 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 TRIM67Q6ZTA4 783 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 PROSER2Q86WR7 435 aaPredicted RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 LSRQ86X29 649 aaPredicted RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 FAM178BQ8IXR5 827 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 ZNF687Q8N1G0 1237 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 FAM26EQ8N5C1 309 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 BHLHE22Q8NFJ8 381 aaPredicted RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 SECISBP2LQ93073 1101 aaKnown RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 ZIC5Q96T25 663 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 FAM117AQ9C073 453 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 BCAS3Q9H6U6 928 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 RXFP3Q9NSD7 469 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 RCOR3Q9P2K3 495 aaPredicted RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 ANGEL1Q9UNK9 670 aaKnown RBP0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 TACC3Q9Y6A5 838 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 TLL2Q9Y6L7 1015 aa0.69□□□□□ -2.3
SYNGAP1-213ENST00000636193 SSH2Q76I76 1423 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms