RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 IQCB1Q15051 598 aa9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 SKIDA1Q1XH10 827 aa9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 RAPGEF4Q8WZA2 1011 aa9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 BAG1Q99933 345 aaPredicted RBP9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 ZNF330Q9Y3S2 320 aaPredicted RBP9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 A0A087WWV3 80 aa9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 PFKFB2O60825 505 aa9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 TAF5LO75529 589 aa9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 ZNF202O95125 648 aa9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 IFIT1P09914 478 aaKnown RBP9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 MARCKSP29966 332 aaPredicted RBP9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 EIF4A1P60842 406 aaKnown RBP9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 CCDC129Q6ZRS4 1044 aa9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 NCOA5Q9HCD5 579 aaKnown RBP9.66□□□□□ -0.86
SMARCA2-246ENST00000635739 CD163L1Q9NR16 1453 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 CRB1P82279 1406 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 KLF18A0A0U1RQI7 1052 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 OSBPL5Q9H0X9 879 aaPredicted RBP9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 NEXMIFQ5QGS0 1516 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 CCDC175P0C221 793 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 TUBB4BP68371 445 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 NYAP1Q6ZVC0 841 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 CEP112Q8N8E3 955 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 VPS18Q9P253 973 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 PCDHA7Q9UN72 937 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 YEATS4O95619 227 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 HOXC9P31274 260 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 IRX5P78411 483 aaPredicted RBP9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 TOB2Q14106 344 aaPredicted RBP9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 AXDND1Q5T1B0 1012 aaPredicted RBP9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 RASSF8Q8NHQ8 419 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 CAGE1Q8TC20 777 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 ANKRD24Q8TF21 1146 aa9.65□□□□□ -0.86
SMARCA2-246ENST00000635739 PHLPP2Q6ZVD8 1323 aa9.65□□□□□ -0.87
SMARCA2-246ENST00000635739 IGSF1Q8N6C5 1336 aa9.65□□□□□ -0.87
SMARCA2-246ENST00000635739 PIP4K2AP48426 406 aaPredicted RBP9.65□□□□□ -0.87
SMARCA2-246ENST00000635739 SCRN1Q12765 414 aa9.65□□□□□ -0.87
SMARCA2-246ENST00000635739 HSP90AA4PQ58FG1 418 aa9.65□□□□□ -0.87
SMARCA2-246ENST00000635739 TTC39AQ5SRH9 613 aa9.65□□□□□ -0.87
SMARCA2-246ENST00000635739 CHST3Q7LGC8 479 aa9.65□□□□□ -0.87
SMARCA2-246ENST00000635739 SUCLG2Q96I99 432 aa9.65□□□□□ -0.87
SMARCA2-246ENST00000635739 RUFY1Q96T51 708 aa9.65□□□□□ -0.87
SMARCA2-246ENST00000635739 CEP126Q9P2H0 1117 aa9.65□□□□□ -0.87
SMARCA2-246ENST00000635739 PPLO60437 1756 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 A0A1W2PQ27 194 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 A0A1W2PQ64 194 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 A0A1W2PQD8 194 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 CCZ1BP86790 482 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 CCZ1P86791 482 aaPredicted RBP9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 CPLX3Q8WVH0 158 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 EDC3Q96F86 508 aaKnown RBP9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 ZFP91Q96JP5 570 aaPredicted RBP9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 ZBTB22O15209 634 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 KARSQ15046 597 aaKnown RBP9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 DPCR1Q3MIW9 517 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 MAP9Q49MG5 647 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 RBM43Q6ZSC3 357 aaKnown RBP9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 HDXQ7Z353 690 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 TRIM22Q8IYM9 498 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 FTOQ9C0B1 505 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 GTF2A1P52655 376 aaPredicted RBP9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 HAND2P61296 217 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 AKAP4Q5JQC9 854 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 ANO1Q5XXA6 986 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 UBE3BQ7Z3V4 1068 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 AMOTL2Q9Y2J4 779 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 HECW2Q9P2P5 1572 aa9.64□□□□□ -0.87
SMARCA2-246ENST00000635739 A0A087WZG4 1122 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 ERICH2A1L162 156 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 ATP5JP18859 108 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 ZNF589Q86UQ0 364 aaPredicted RBP9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 RAB11FIP4Q86YS3 637 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 NSUN7Q8NE18 718 aaKnown RBP9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 KLHDC4Q8TBB5 520 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 CRACR2AQ9BSW2 395 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 FAM107BQ9H098 131 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 ALDH8A1Q9H2A2 487 aaPredicted RBP9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 RSPH14Q9UHP6 348 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 USP42Q9H9J4 1324 aaKnown RBP9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 ARHGEF28Q8N1W1 1705 aaKnown RBP9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 ZNF213O14771 459 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 TUBBP07437 444 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 MCM3P25205 808 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 CYP2C19P33261 490 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 NDUFA8P51970 172 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 IRX3P78415 501 aaPredicted RBP9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 OTUD7BQ6GQQ9 843 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.63□□□□□ -0.877e-7■■■■■ 31.5
SMARCA2-246ENST00000635739 CDC42BPGQ6DT37 1551 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 CTAGE15A4D2H0 777 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 H0YHG0 523 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 CTAGE8P0CG41 777 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 USP8P40818 1118 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 TFCP2Q12800 502 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 MTX1Q13505 466 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 KLHL10Q6JEL2 608 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 CTAGE6Q86UF2 777 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 CTAGE4Q8IX94 777 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 CCDC148Q8NFR7 591 aa9.63□□□□□ -0.87
SMARCA2-246ENST00000635739 NCOA7Q8NI08 942 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms