RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 MCM5P33992 734 aa14.69□□□□□ -0.06
PTPN11-205ENST00000635625 CCDC158Q5M9N0 1113 aa14.69□□□□□ -0.06
PTPN11-205ENST00000635625 GTF3C6Q969F1 213 aa14.69□□□□□ -0.06
PTPN11-205ENST00000635625 NEUROD6Q96NK8 337 aa14.69□□□□□ -0.06
PTPN11-205ENST00000635625 SGIP1Q9BQI5 828 aa14.69□□□□□ -0.06
PTPN11-205ENST00000635625 PCDHB13Q9Y5F0 798 aa14.69□□□□□ -0.06
PTPN11-205ENST00000635625 A0A1B0GUL7 405 aa14.68□□□□□ -0.06
PTPN11-205ENST00000635625 RNF113AO15541 343 aaKnown RBP14.68□□□□□ -0.06
PTPN11-205ENST00000635625 CSF1RP07333 972 aa14.68□□□□□ -0.06
PTPN11-205ENST00000635625 DDX46Q7L014 1031 aaKnown RBP14.68□□□□□ -0.06
PTPN11-205ENST00000635625 CDCA7Q9BWT1 371 aaPredicted RBP14.68□□□□□ -0.06
PTPN11-205ENST00000635625 VPS37CA5D8V6 355 aaPredicted RBP14.68□□□□□ -0.06
PTPN11-205ENST00000635625 GIGYF2Q6Y7W6 1299 aaKnown RBP14.68□□□□□ -0.06
PTPN11-205ENST00000635625 EDC3Q96F86 508 aaKnown RBP14.68□□□□□ -0.06
PTPN11-205ENST00000635625 SCAND2PQ9GZW5 306 aaPredicted RBP14.68□□□□□ -0.06
PTPN11-205ENST00000635625 LRP5O75197 1615 aa14.67□□□□□ -0.06
PTPN11-205ENST00000635625 ARAP2Q8WZ64 1704 aa14.67□□□□□ -0.06
PTPN11-205ENST00000635625 GOLIM4O00461 696 aa14.67□□□□□ -0.06
PTPN11-205ENST00000635625 GADD45BO75293 160 aaPredicted RBP14.67□□□□□ -0.06
PTPN11-205ENST00000635625 FBXL16Q8N461 479 aa14.67□□□□□ -0.06
PTPN11-205ENST00000635625 PIGBQ92521 554 aa14.67□□□□□ -0.06
PTPN11-205ENST00000635625 CHAMP1Q96JM3 812 aa14.67□□□□□ -0.06
PTPN11-205ENST00000635625 AK7Q96M32 723 aa14.67□□□□□ -0.06
PTPN11-205ENST00000635625 C8orf37Q96NL8 207 aa14.67□□□□□ -0.06
PTPN11-205ENST00000635625 CTNNA3Q9UI47 895 aa14.67□□□□□ -0.06
PTPN11-205ENST00000635625 CYP21A2P08686 494 aa14.66□□□□□ -0.06
PTPN11-205ENST00000635625 IFIT5Q13325 482 aaKnown RBP14.66□□□□□ -0.06
PTPN11-205ENST00000635625 DHX32Q7L7V1 743 aaKnown RBP14.66□□□□□ -0.06
PTPN11-205ENST00000635625 NECAB1Q8N987 351 aa14.66□□□□□ -0.06
PTPN11-205ENST00000635625 ZNF512BQ96KM6 892 aaPredicted RBP14.66□□□□□ -0.06
PTPN11-205ENST00000635625 ERVV-1B6SEH8 477 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 FIBPO43427 364 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 NUP98P52948 1817 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 HMGN5P82970 282 aaKnown RBP14.65□□□□□ -0.06
PTPN11-205ENST00000635625 LRRC24Q50LG9 513 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 TAF7LQ5H9L4 462 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 DNAJC10Q8IXB1 793 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 RREB1Q92766 1687 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 MS4A3Q96HJ5 214 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 LARP6Q9BRS8 491 aaKnown RBP14.65□□□□□ -0.06
PTPN11-205ENST00000635625 AGXT2Q9BYV1 514 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 BTG4Q9NY30 223 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 CCDC39Q9UFE4 941 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 MYH15Q9Y2K3 1946 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 AFF2P51816 1311 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 PFKFB2O60825 505 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 MSNP26038 577 aaKnown RBP14.65□□□□□ -0.06
PTPN11-205ENST00000635625 DNM1Q05193 864 aaKnown RBP14.65□□□□□ -0.06
PTPN11-205ENST00000635625 TTC39AQ5SRH9 613 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 GORABQ5T7V8 394 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 RNF25Q96BH1 459 aaPredicted RBP14.65□□□□□ -0.06
PTPN11-205ENST00000635625 ZSCAN16Q9H4T2 348 aaPredicted RBP14.65□□□□□ -0.06
PTPN11-205ENST00000635625 GDPD2Q9HCC8 539 aa14.65□□□□□ -0.06
PTPN11-205ENST00000635625 DOT1LQ8TEK3 1739 aa14.64□□□□□ -0.07
PTPN11-205ENST00000635625 RIC1Q4ADV7 1423 aa14.64□□□□□ -0.07
PTPN11-205ENST00000635625 MAST3O60307 1309 aa14.64□□□□□ -0.07
PTPN11-205ENST00000635625 SOCS7O14512 581 aa14.64□□□□□ -0.07
PTPN11-205ENST00000635625 RGL2O15211 777 aa14.64□□□□□ -0.07
PTPN11-205ENST00000635625 TIMM10P62072 90 aa14.64□□□□□ -0.07
PTPN11-205ENST00000635625 ZSCAN25Q6NSZ9 544 aa14.64□□□□□ -0.07
PTPN11-205ENST00000635625 Q6ZUG5 572 aa14.64□□□□□ -0.07
PTPN11-205ENST00000635625 ZNF467Q7Z7K2 595 aaPredicted RBP14.64□□□□□ -0.07
PTPN11-205ENST00000635625 DDX60Q8IY21 1712 aaKnown RBP14.64□□□□□ -0.07
PTPN11-205ENST00000635625 ATRNO75882 1429 aa14.63□□□□□ -0.07
PTPN11-205ENST00000635625 WDR19Q8NEZ3 1342 aa14.63□□□□□ -0.07
PTPN11-205ENST00000635625 GABBR2O75899 941 aa14.63□□□□□ -0.07
PTPN11-205ENST00000635625 HSP90B1P14625 803 aaKnown RBP14.63□□□□□ -0.07
PTPN11-205ENST00000635625 ATL3Q6DD88 541 aa14.63□□□□□ -0.07
PTPN11-205ENST00000635625 RGS22Q8NE09 1264 aa14.63□□□□□ -0.07
PTPN11-205ENST00000635625 SMARCC2Q8TAQ2 1214 aa14.63□□□□□ -0.07
PTPN11-205ENST00000635625 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.63□□□□□ -0.07
PTPN11-205ENST00000635625 ASAP1Q9ULH1 1129 aa14.63□□□□□ -0.07
PTPN11-205ENST00000635625 NOL7Q9UMY1 257 aaKnown RBP14.63□□□□□ -0.07
PTPN11-205ENST00000635625 LAMB2P55268 1798 aa14.63□□□□□ -0.07
PTPN11-205ENST00000635625 NRAPQ86VF7 1730 aa14.63□□□□□ -0.07
PTPN11-205ENST00000635625 HSPD1P10809 573 aaKnown RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 CYP19A1P11511 503 aaPredicted RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 IL6STP40189 918 aaPredicted RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 FGD1P98174 961 aa14.62□□□□□ -0.07
PTPN11-205ENST00000635625 TTF1Q15361 905 aaPredicted RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 NAA16Q6N069 864 aaPredicted RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 CCDC129Q6ZRS4 1044 aa14.62□□□□□ -0.07
PTPN11-205ENST00000635625 NLRP10Q86W26 655 aa14.62□□□□□ -0.07
PTPN11-205ENST00000635625 IFNL1Q8IU54 200 aa14.62□□□□□ -0.07
PTPN11-205ENST00000635625 XAGE2Q96GT9 111 aa14.62□□□□□ -0.07
PTPN11-205ENST00000635625 ZNF594Q96JF6 807 aaPredicted RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 ANKRD18BA2A2Z9 1011 aa14.62□□□□□ -0.07
PTPN11-205ENST00000635625 GALR2O43603 387 aaPredicted RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 CTSWP56202 376 aa14.62□□□□□ -0.07
PTPN11-205ENST00000635625 EXOSC10Q01780 885 aaKnown RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 FOXD4L6Q3SYB3 417 aaPredicted RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 FOXD4L3Q6VB84 417 aaPredicted RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 CDC37L1Q7L3B6 337 aa14.62□□□□□ -0.07
PTPN11-205ENST00000635625 ZNF274Q96GC6 653 aaPredicted RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 NGLY1Q96IV0 654 aa14.62□□□□□ -0.07
PTPN11-205ENST00000635625 SEC62Q99442 399 aaKnown RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 THRAP3Q9Y2W1 955 aaKnown RBP14.62□□□□□ -0.07
PTPN11-205ENST00000635625 TAF6LQ9Y6J9 622 aa14.62□□□□□ -0.07
PTPN11-205ENST00000635625 EXOC5O00471 708 aa14.61□□□□□ -0.07
PTPN11-205ENST00000635625 ATP2B3Q16720 1220 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms