RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	XRCC5	P13010	732 aa	Known RBP	10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	ATP2B1	P20020	1258 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	CD33	P20138	364 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	PLAUR	Q03405	335 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	ARID5A	Q03989	594 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	KANK3	Q6NY19	840 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	CCNJL	Q8IV13	435 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	BHMT	Q93088	406 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	CNTNAP3B	Q96NU0	1288 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	OSMR	Q99650	979 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	ZKSCAN3	Q9BRR0	538 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	RSRP1	Q9BUV0	290 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	CNTNAP3	Q9BZ76	1288 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	KBTBD4	Q9NVX7	518 aa		10.08	□□□□□ -0.8
SMARCA2-238	ENST00000635273	ACPP	P15309	386 aa		10.07	□□□□□ -0.8
SMARCA2-238	ENST00000635273	MAP3K10	Q02779	954 aa		10.07	□□□□□ -0.8
SMARCA2-238	ENST00000635273	DHX32	Q7L7V1	743 aa	Known RBP	10.07	□□□□□ -0.8
SMARCA2-238	ENST00000635273	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.07	□□□□□ -0.8
SMARCA2-238	ENST00000635273	CEP120	Q8N960	986 aa		10.07	□□□□□ -0.8
SMARCA2-238	ENST00000635273	ANKRD24	Q8TF21	1146 aa		10.07	□□□□□ -0.8
SMARCA2-238	ENST00000635273	DHX38	Q92620	1227 aa	Known RBP	10.07	□□□□□ -0.8
SMARCA2-238	ENST00000635273	ZNF837	Q96EG3	531 aa	Predicted RBP	10.07	□□□□□ -0.8
SMARCA2-238	ENST00000635273	GMCL1	Q96IK5	515 aa		10.07	□□□□□ -0.8
SMARCA2-238	ENST00000635273	PPM1H	Q9ULR3	514 aa		10.07	□□□□□ -0.8
SMARCA2-238	ENST00000635273	AKAP2	Q9Y2D5	859 aa		10.07	□□□□□ -0.8
SMARCA2-238	ENST00000635273	GJA8	P48165	433 aa		10.06	□□□□□ -0.8
SMARCA2-238	ENST00000635273	CCDC85B	Q15834	202 aa	Predicted RBP	10.06	□□□□□ -0.8
SMARCA2-238	ENST00000635273	DTHD1	Q6ZMT9	781 aa		10.06	□□□□□ -0.8
SMARCA2-238	ENST00000635273	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.06	□□□□□ -0.8
SMARCA2-238	ENST00000635273	TRPA1	O75762	1119 aa		10.05	□□□□□ -0.8
SMARCA2-238	ENST00000635273	PAK2	Q13177	524 aa		10.05	□□□□□ -0.8
SMARCA2-238	ENST00000635273	VPS37D	Q86XT2	251 aa		10.05	□□□□□ -0.8
SMARCA2-238	ENST00000635273	GTPBP3	Q969Y2	492 aa	Known RBP	10.05	□□□□□ -0.8
SMARCA2-238	ENST00000635273	NSUN5	Q96P11	429 aa	Known RBP	10.05	□□□□□ -0.8
SMARCA2-238	ENST00000635273	PSMG3-AS1	Q96PY0	264 aa		10.05	□□□□□ -0.8
SMARCA2-238	ENST00000635273	DZANK1	Q9NVP4	752 aa		10.05	□□□□□ -0.8
SMARCA2-238	ENST00000635273	ITGA6	P23229	1130 aa		10.04	□□□□□ -0.8
SMARCA2-238	ENST00000635273	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
SMARCA2-238	ENST00000635273	NRL	P54845	237 aa		10.04	□□□□□ -0.8
SMARCA2-238	ENST00000635273	FAM182B	Q5T319	152 aa		10.04	□□□□□ -0.8
SMARCA2-238	ENST00000635273	RELL1	Q8IUW5	271 aa		10.04	□□□□□ -0.8
SMARCA2-238	ENST00000635273	ARMC5	Q96C12	935 aa		10.04	□□□□□ -0.8
SMARCA2-238	ENST00000635273	DNAJC2	Q99543	621 aa	Known RBP	10.04	□□□□□ -0.8
SMARCA2-238	ENST00000635273	TRIM56	Q9BRZ2	755 aa	Known RBP	10.04	□□□□□ -0.8
SMARCA2-238	ENST00000635273	ADAM23	O75077	832 aa		10.03	□□□□□ -0.8
SMARCA2-238	ENST00000635273	FBXO24	O75426	580 aa		10.03	□□□□□ -0.8
SMARCA2-238	ENST00000635273	FGFR3	P22607	806 aa		10.03	□□□□□ -0.8
SMARCA2-238	ENST00000635273	GRIA4	P48058	902 aa		10.03	□□□□□ -0.8
SMARCA2-238	ENST00000635273	PWP1	Q13610	501 aa		10.03	□□□□□ -0.8
SMARCA2-238	ENST00000635273	SV2B	Q7L1I2	683 aa		10.03	□□□□□ -0.8
SMARCA2-238	ENST00000635273	GPRASP2	Q96D09	838 aa		10.03	□□□□□ -0.8
SMARCA2-238	ENST00000635273	UNC13A	Q9UPW8	1703 aa		10.02	□□□□□ -0.8
SMARCA2-238	ENST00000635273		F6X3S4	739 aa		10.02	□□□□□ -0.81
SMARCA2-238	ENST00000635273	NFKBIE	O00221	500 aa		10.02	□□□□□ -0.81
SMARCA2-238	ENST00000635273	NEUROD1	Q13562	356 aa		10.02	□□□□□ -0.81
SMARCA2-238	ENST00000635273	DPH6	Q7L8W6	267 aa		10.02	□□□□□ -0.81
SMARCA2-238	ENST00000635273	TRPM4	Q8TD43	1214 aa		10.02	□□□□□ -0.81
SMARCA2-238	ENST00000635273	SPACA7	Q96KW9	195 aa		10.02	□□□□□ -0.81
SMARCA2-238	ENST00000635273	TMEM74	Q96NL1	305 aa		10.02	□□□□□ -0.81
SMARCA2-238	ENST00000635273	HHIP	Q96QV1	700 aa		10.02	□□□□□ -0.81
SMARCA2-238	ENST00000635273	SPON2	Q9BUD6	331 aa		10.02	□□□□□ -0.81
SMARCA2-238	ENST00000635273	ZFYVE1	Q9HBF4	777 aa		10.02	□□□□□ -0.81
SMARCA2-238	ENST00000635273	ADAMTS1	Q9UHI8	967 aa		10.02	□□□□□ -0.81
SMARCA2-238	ENST00000635273	PHF24	Q9UPV7	400 aa		10.02	□□□□□ -0.81
SMARCA2-238	ENST00000635273	LOC102724428	A0A0B4J2F2	783 aa		10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	MINDY4B	A8MYZ0	360 aa		10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	ZBTB42	B2RXF5	422 aa		10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	ATF4	P18848	351 aa	Predicted RBP	10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	ITPKA	P23677	461 aa		10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	SIK1	P57059	783 aa		10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	SPRED3	Q2MJR0	410 aa		10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	TPTE2	Q6XPS3	522 aa		10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	MCF2L2	Q86YR7	1114 aa		10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	SVOP	Q8N4V2	548 aa		10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	TMEM102	Q8N9M5	508 aa	Predicted RBP	10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	NXPE3	Q969Y0	559 aa		10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.01	□□□□□ -0.81
SMARCA2-238	ENST00000635273	METTL12	A8MUP2	240 aa		10	□□□□□ -0.81
SMARCA2-238	ENST00000635273		J3QW42	95 aa		10	□□□□□ -0.81
SMARCA2-238	ENST00000635273	FGR	P09769	529 aa		10	□□□□□ -0.81
SMARCA2-238	ENST00000635273	RLBP1	P12271	317 aa		10	□□□□□ -0.81
SMARCA2-238	ENST00000635273	GBP2	P32456	591 aa	Predicted RBP	10	□□□□□ -0.81
SMARCA2-238	ENST00000635273	GPLD1	P80108	840 aa		10	□□□□□ -0.81
SMARCA2-238	ENST00000635273	CTBS	Q01459	385 aa		10	□□□□□ -0.81
SMARCA2-238	ENST00000635273	KIAA0825	Q8IV33	1275 aa		10	□□□□□ -0.81
SMARCA2-238	ENST00000635273	RASGRP4	Q8TDF6	673 aa		10	□□□□□ -0.81
SMARCA2-238	ENST00000635273		A0A096LPE4	126 aa		9.99	□□□□□ -0.81
SMARCA2-238	ENST00000635273		A0A1W2PPZ6	126 aa		9.99	□□□□□ -0.81
SMARCA2-238	ENST00000635273	MLLT1	Q03111	559 aa	Predicted RBP	9.99	□□□□□ -0.81
SMARCA2-238	ENST00000635273	RBL2	Q08999	1139 aa		9.99	□□□□□ -0.81
SMARCA2-238	ENST00000635273	MAP3K11	Q16584	847 aa		9.99	□□□□□ -0.81
SMARCA2-238	ENST00000635273	FAM177A1	Q8N128	213 aa	Predicted RBP	9.99	□□□□□ -0.81
SMARCA2-238	ENST00000635273	PBX4	Q9BYU1	374 aa		9.99	□□□□□ -0.81
SMARCA2-238	ENST00000635273	CEP44	Q9C0F1	390 aa		9.99	□□□□□ -0.81
SMARCA2-238	ENST00000635273	PDE2A	O00408	941 aa	Predicted RBP	9.98	□□□□□ -0.81
SMARCA2-238	ENST00000635273	PPFIA3	O75145	1194 aa		9.98	□□□□□ -0.81
SMARCA2-238	ENST00000635273	CELA3A	P09093	270 aa		9.98	□□□□□ -0.81
SMARCA2-238	ENST00000635273	EIF4A3	P38919	411 aa	Known RBP	9.98	□□□□□ -0.81
SMARCA2-238	ENST00000635273	HFE2	Q6ZVN8	426 aa		9.98	□□□□□ -0.81
SMARCA2-238	ENST00000635273	SCARF2	Q96GP6	870 aa	Predicted RBP	9.98	□□□□□ -0.81

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