RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 SLC10A5Q5PT55 438 aa7.05□□□□□ -1.28
LINC00550-202ENST00000629570 BEND3Q5T5X7 828 aa7.05□□□□□ -1.28
LINC00550-202ENST00000629570 STYK1Q6J9G0 422 aa7.05□□□□□ -1.28
LINC00550-202ENST00000629570 PRPF40BQ6NWY9 871 aaKnown RBP7.05□□□□□ -1.28
LINC00550-202ENST00000629570 SLC4A10Q6U841 1118 aa7.05□□□□□ -1.28
LINC00550-202ENST00000629570 TTLL6Q8N841 843 aa7.05□□□□□ -1.28
LINC00550-202ENST00000629570 ZBTB38Q8NAP3 1195 aaPredicted RBP7.05□□□□□ -1.28
LINC00550-202ENST00000629570 LINS1Q8NG48 757 aa7.05□□□□□ -1.28
LINC00550-202ENST00000629570 MASTLQ96GX5 879 aa7.05□□□□□ -1.28
LINC00550-202ENST00000629570 NOB1Q9ULX3 412 aaKnown RBP7.05□□□□□ -1.28
LINC00550-202ENST00000629570 COL4A1P02462 1669 aa7.05□□□□□ -1.28
LINC00550-202ENST00000629570 LAMB2P55268 1798 aa7.05□□□□□ -1.28
LINC00550-202ENST00000629570 KIF16BQ96L93 1317 aa7.04□□□□□ -1.28
LINC00550-202ENST00000629570 SMAPO00193 183 aa7.04□□□□□ -1.28
LINC00550-202ENST00000629570 PCCAP05165 728 aaPredicted RBP7.04□□□□□ -1.28
LINC00550-202ENST00000629570 BRPF1P55201 1214 aaPredicted RBP7.04□□□□□ -1.28
LINC00550-202ENST00000629570 OLFM4Q6UX06 510 aa7.04□□□□□ -1.28
LINC00550-202ENST00000629570 UBE3BQ7Z3V4 1068 aa7.04□□□□□ -1.28
LINC00550-202ENST00000629570 RPGRQ92834 1020 aaKnown RBP7.04□□□□□ -1.28
LINC00550-202ENST00000629570 NLRP3Q96P20 1036 aa7.04□□□□□ -1.28
LINC00550-202ENST00000629570 FAM198AQ9UFP1 575 aa7.04□□□□□ -1.28
LINC00550-202ENST00000629570 PDZRN3Q9UPQ7 1066 aa7.04□□□□□ -1.28
LINC00550-202ENST00000629570 TNNQ9UQP3 1299 aa7.04□□□□□ -1.28
LINC00550-202ENST00000629570 SLX4Q8IY92 1834 aa7.04□□□□□ -1.28
LINC00550-202ENST00000629570 CDHR2Q9BYE9 1310 aa7.03□□□□□ -1.28
LINC00550-202ENST00000629570 CACNA1SQ13698 1873 aa7.03□□□□□ -1.28
LINC00550-202ENST00000629570 C21orf2O43822 256 aa7.03□□□□□ -1.28
LINC00550-202ENST00000629570 GRIN3BO60391 1043 aa7.03□□□□□ -1.28
LINC00550-202ENST00000629570 TRIM27P14373 513 aa7.03□□□□□ -1.28
LINC00550-202ENST00000629570 HOXA10P31260 410 aaPredicted RBP7.03□□□□□ -1.28
LINC00550-202ENST00000629570 CASP7P55210 303 aa7.03□□□□□ -1.28
LINC00550-202ENST00000629570 PRSS12P56730 875 aa7.03□□□□□ -1.28
LINC00550-202ENST00000629570 FRAT1Q92837 279 aaPredicted RBP7.03□□□□□ -1.28
LINC00550-202ENST00000629570 CNKSR1Q969H4 720 aa7.03□□□□□ -1.28
LINC00550-202ENST00000629570 CCDC85AQ96PX6 553 aaPredicted RBP7.03□□□□□ -1.28
LINC00550-202ENST00000629570 SRCIN1Q9C0H9 1055 aa7.03□□□□□ -1.28
LINC00550-202ENST00000629570 ARFGEF1Q9Y6D6 1849 aa7.03□□□□□ -1.28
LINC00550-202ENST00000629570 ABCC4O15439 1325 aa7.02□□□□□ -1.28
LINC00550-202ENST00000629570 C3orf80F5H4A9 247 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 H7C1W4 665 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 NFKBIEO00221 500 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 GRM8O00222 908 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 PDE8AO60658 829 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 ALDH1L1O75891 902 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 CTSWP56202 376 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 PPP4CP60510 307 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 RASSF7Q02833 373 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 SF3B3Q15393 1217 aaKnown RBP7.02□□□□□ -1.29
LINC00550-202ENST00000629570 E2F4Q16254 413 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 ARHGAP27Q6ZUM4 889 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 SAMD7Q7Z3H4 446 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 SPRYD3Q8NCJ5 442 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 C7orf43Q8WVR3 580 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 RBM17Q96I25 401 aaKnown RBP7.02□□□□□ -1.29
LINC00550-202ENST00000629570 CRAMP1Q96RY5 1269 aa7.02□□□□□ -1.29
LINC00550-202ENST00000629570 API5Q9BZZ5 524 aaKnown RBP7.02□□□□□ -1.29
LINC00550-202ENST00000629570 SNED1Q8TER0 1413 aa7.01□□□□□ -1.29
LINC00550-202ENST00000629570 TAF1P21675 1872 aa7.01□□□□□ -1.29
LINC00550-202ENST00000629570 GRXCR2A6NFK2 248 aa7.01□□□□□ -1.29
LINC00550-202ENST00000629570 PPEF1O14829 653 aaPredicted RBP7.01□□□□□ -1.29
LINC00550-202ENST00000629570 NBPF7P0C2Y1 421 aaPredicted RBP7.01□□□□□ -1.29
LINC00550-202ENST00000629570 PRELPP51888 382 aa7.01□□□□□ -1.29
LINC00550-202ENST00000629570 GRAPQ13588 217 aa7.01□□□□□ -1.29
LINC00550-202ENST00000629570 FAM161AQ3B820 660 aa7.01□□□□□ -1.29
LINC00550-202ENST00000629570 EPHA10Q5JZY3 1008 aa7.01□□□□□ -1.29
LINC00550-202ENST00000629570 ATF7IPQ6VMQ6 1270 aa7.01□□□□□ -1.29
LINC00550-202ENST00000629570 DDX46Q7L014 1031 aaKnown RBP7.01□□□□□ -1.29
LINC00550-202ENST00000629570 GRAPLQ8TC17 118 aaPredicted RBP7.01□□□□□ -1.29
LINC00550-202ENST00000629570 ARHGAP45Q92619 1136 aa7.01□□□□□ -1.29
LINC00550-202ENST00000629570 CELF1Q92879 486 aaKnown RBP7.01□□□□□ -1.29
LINC00550-202ENST00000629570 CLUAP1Q96AJ1 413 aa7.01□□□□□ -1.29
LINC00550-202ENST00000629570 GREM2Q9H772 168 aa7.01□□□□□ -1.29
LINC00550-202ENST00000629570 SEC31BQ9NQW1 1179 aa7.01□□□□□ -1.29
LINC00550-202ENST00000629570 IPO8O15397 1037 aaKnown RBP7□□□□□ -1.29
LINC00550-202ENST00000629570 RLBP1P12271 317 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 HSP90B1P14625 803 aaKnown RBP7□□□□□ -1.29
LINC00550-202ENST00000629570 ALDH1B1P30837 517 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 CCT4P50991 539 aaKnown RBP7□□□□□ -1.29
LINC00550-202ENST00000629570 FOXO4P98177 505 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 CCDC152Q4G0S7 254 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 CCDC93Q567U6 631 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 ZKSCAN2Q63HK3 967 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 Q6ZNB5 142 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 TTLL11Q8NHH1 800 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 TATDN2Q93075 761 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 KAZALD1Q96I82 304 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 SUCLG2Q96I99 432 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 PLA2G12BQ9BX93 195 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 USP44Q9H0E7 712 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 CDHR5Q9HBB8 845 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 C9orf78Q9NZ63 289 aaPredicted RBP7□□□□□ -1.29
LINC00550-202ENST00000629570 RCAN3Q9UKA8 241 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 ARIH1Q9Y4X5 557 aaPredicted RBP7□□□□□ -1.29
LINC00550-202ENST00000629570 UTYO14607 1347 aa7□□□□□ -1.29
LINC00550-202ENST00000629570 LRRC37AA6NMS7 1700 aa6.99□□□□□ -1.29
LINC00550-202ENST00000629570 RTL9Q8NET4 1388 aa6.99□□□□□ -1.29
LINC00550-202ENST00000629570 FER1L6Q2WGJ9 1857 aa6.99□□□□□ -1.29
LINC00550-202ENST00000629570 TJAP1Q5JTD0 557 aa6.99□□□□□ -1.29
LINC00550-202ENST00000629570 SOGA3Q5TF21 947 aa6.99□□□□□ -1.29
LINC00550-202ENST00000629570 INTS3Q68E01 1043 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms