RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 RAD17O75943 681 aa13.96□□□□□ -0.17
DDX41-219ENST00000629036 UBTFL1P0CB47 393 aaPredicted RBP13.96□□□□□ -0.17
DDX41-219ENST00000629036 EIF6P56537 245 aaKnown RBP13.96□□□□□ -0.17
DDX41-219ENST00000629036 PTPN12Q05209 780 aaKnown RBP13.96□□□□□ -0.17
DDX41-219ENST00000629036 MTX1Q13505 466 aa13.96□□□□□ -0.17
DDX41-219ENST00000629036 DOK7Q18PE1 504 aa13.96□□□□□ -0.17
DDX41-219ENST00000629036 CCDC57Q2TAC2 916 aa13.96□□□□□ -0.17
DDX41-219ENST00000629036 LRRC24Q50LG9 513 aa13.96□□□□□ -0.17
DDX41-219ENST00000629036 C15orf52Q6ZUT6 534 aaKnown RBP13.96□□□□□ -0.17
DDX41-219ENST00000629036 EYA3Q99504 573 aa13.96□□□□□ -0.17
DDX41-219ENST00000629036 MPHOSPH8Q99549 860 aa13.96□□□□□ -0.17
DDX41-219ENST00000629036 LEMD3Q9Y2U8 911 aa13.96□□□□□ -0.17
DDX41-219ENST00000629036 CASP8AP2Q9UKL3 1982 aa13.96□□□□□ -0.18
DDX41-219ENST00000629036 PSMD14O00487 310 aa13.95□□□□□ -0.18
DDX41-219ENST00000629036 TAF5LO75529 589 aa13.95□□□□□ -0.18
DDX41-219ENST00000629036 EAPPQ56P03 285 aaPredicted RBP13.95□□□□□ -0.18
DDX41-219ENST00000629036 CIAPIN1Q6FI81 312 aa13.95□□□□□ -0.18
DDX41-219ENST00000629036 HELBQ8NG08 1087 aaPredicted RBP13.95□□□□□ -0.18
DDX41-219ENST00000629036 ANKRD2Q9GZV1 360 aa13.95□□□□□ -0.18
DDX41-219ENST00000629036 GPRC5DQ9NZD1 345 aa13.95□□□□□ -0.18
DDX41-219ENST00000629036 PDE4DIPQ5VU43 2346 aa13.95□□□□□ -0.18
DDX41-219ENST00000629036 EPS15P42566 896 aa13.94□□□□□ -0.18
DDX41-219ENST00000629036 GMPSP49915 693 aaPredicted RBP13.94□□□□□ -0.18
DDX41-219ENST00000629036 LDHAL6AQ6ZMR3 332 aa13.94□□□□□ -0.18
DDX41-219ENST00000629036 ATG9AQ7Z3C6 839 aa13.94□□□□□ -0.18
DDX41-219ENST00000629036 LDHDQ86WU2 507 aa13.94□□□□□ -0.18
DDX41-219ENST00000629036 GMLQ99445 158 aa13.94□□□□□ -0.18
DDX41-219ENST00000629036 HACL1Q9UJ83 578 aa13.94□□□□□ -0.18
DDX41-219ENST00000629036 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
DDX41-219ENST00000629036 GJA3Q9Y6H8 435 aa13.94□□□□□ -0.18
DDX41-219ENST00000629036 IQCA1LA6NCM1 817 aa13.93□□□□□ -0.18
DDX41-219ENST00000629036 VIL1P09327 827 aaKnown RBP13.93□□□□□ -0.18
DDX41-219ENST00000629036 EPHX2P34913 555 aa13.93□□□□□ -0.18
DDX41-219ENST00000629036 DEFB115Q30KQ5 88 aa13.93□□□□□ -0.18
DDX41-219ENST00000629036 DZIP1LQ8IYY4 767 aaKnown RBP13.93□□□□□ -0.18
DDX41-219ENST00000629036 ZC3H12CQ9C0D7 883 aaKnown RBP13.93□□□□□ -0.18
DDX41-219ENST00000629036 RCAN3Q9UKA8 241 aa13.93□□□□□ -0.18
DDX41-219ENST00000629036 ITGBL1O95965 494 aaPredicted RBP13.92□□□□□ -0.18
DDX41-219ENST00000629036 PANK1Q8TE04 598 aa13.92□□□□□ -0.18
DDX41-219ENST00000629036 CNNM1Q9NRU3 951 aa13.92□□□□□ -0.18
DDX41-219ENST00000629036 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
DDX41-219ENST00000629036 MROH5Q6ZUA9 1318 aa13.91□□□□□ -0.18
DDX41-219ENST00000629036 WDR33Q9C0J8 1336 aaKnown RBP13.91□□□□□ -0.18
DDX41-219ENST00000629036 ZBTB7BO15156 539 aaPredicted RBP13.91□□□□□ -0.18
DDX41-219ENST00000629036 EGFRP00533 1210 aa13.91□□□□□ -0.18
DDX41-219ENST00000629036 GNAI3P08754 354 aa13.91□□□□□ -0.18
DDX41-219ENST00000629036 FGFR2P21802 821 aa13.91□□□□□ -0.18
DDX41-219ENST00000629036 RGS19P49795 217 aa13.91□□□□□ -0.18
DDX41-219ENST00000629036 MAP2K1Q02750 393 aaPredicted RBP13.91□□□□□ -0.18
DDX41-219ENST00000629036 GRM1Q13255 1194 aa13.91□□□□□ -0.18
DDX41-219ENST00000629036 TNIP1Q15025 636 aa13.91□□□□□ -0.18
DDX41-219ENST00000629036 DACT2Q5SW24 774 aa13.91□□□□□ -0.18
DDX41-219ENST00000629036 TRPM4Q8TD43 1214 aa13.91□□□□□ -0.18
DDX41-219ENST00000629036 COA1Q9GZY4 146 aa13.91□□□□□ -0.18
DDX41-219ENST00000629036 COPRSQ9NQ92 184 aa13.91□□□□□ -0.18
DDX41-219ENST00000629036 ABT1Q9ULW3 272 aaKnown RBP13.91□□□□□ -0.18
DDX41-219ENST00000629036 PA2G4Q9UQ80 394 aaKnown RBP13.91□□□□□ -0.18
DDX41-219ENST00000629036 AKAP11Q9UKA4 1901 aa13.91□□□□□ -0.18
DDX41-219ENST00000629036 COL1A1P02452 1464 aaPredicted RBP13.91□□□□□ -0.18
DDX41-219ENST00000629036 PNMA6EA0A0J9YXQ4 647 aa13.9□□□□□ -0.18
DDX41-219ENST00000629036 EYA2O00167 538 aa13.9□□□□□ -0.18
DDX41-219ENST00000629036 IL1R1P14778 569 aa13.9□□□□□ -0.18
DDX41-219ENST00000629036 HIRAP54198 1017 aaPredicted RBP13.9□□□□□ -0.18
DDX41-219ENST00000629036 UBE4AQ14139 1066 aa13.9□□□□□ -0.18
DDX41-219ENST00000629036 TAF7LQ5H9L4 462 aa13.9□□□□□ -0.18
DDX41-219ENST00000629036 PAXIP1Q6ZW49 1069 aaPredicted RBP13.9□□□□□ -0.18
DDX41-219ENST00000629036 PODNQ7Z5L7 613 aa13.9□□□□□ -0.18
DDX41-219ENST00000629036 DPF2Q92785 391 aa13.9□□□□□ -0.18
DDX41-219ENST00000629036 TSKSQ9UJT2 592 aa13.9□□□□□ -0.18
DDX41-219ENST00000629036 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.9□□□□□ -0.18
DDX41-219ENST00000629036 MYO5AQ9Y4I1 1855 aaKnown RBP13.89□□□□□ -0.19
DDX41-219ENST00000629036 RASSF10A6NK89 507 aa13.89□□□□□ -0.19
DDX41-219ENST00000629036 PLIN1O60240 522 aa13.89□□□□□ -0.19
DDX41-219ENST00000629036 CIAO1O76071 339 aa13.89□□□□□ -0.19
DDX41-219ENST00000629036 PDE8BO95263 885 aa13.89□□□□□ -0.19
DDX41-219ENST00000629036 ZNF280AP59817 542 aaPredicted RBP13.89□□□□□ -0.19
DDX41-219ENST00000629036 POLA2Q14181 598 aa13.89□□□□□ -0.19
DDX41-219ENST00000629036 C20orf194Q5TEA3 1177 aa13.89□□□□□ -0.19
DDX41-219ENST00000629036 MAP1SQ66K74 1059 aaPredicted RBP13.89□□□□□ -0.19
DDX41-219ENST00000629036 RSBN1LQ6PCB5 846 aaPredicted RBP13.89□□□□□ -0.19
DDX41-219ENST00000629036 MXD3Q9BW11 206 aa13.89□□□□□ -0.19
DDX41-219ENST00000629036 CD209Q9NNX6 404 aa13.89□□□□□ -0.19
DDX41-219ENST00000629036 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
DDX41-219ENST00000629036 GNAI2P04899 355 aa13.88□□□□□ -0.19
DDX41-219ENST00000629036 RPS12P25398 132 aaKnown RBP13.88□□□□□ -0.19
DDX41-219ENST00000629036 MICALL2Q8IY33 904 aa13.88□□□□□ -0.19
DDX41-219ENST00000629036 CERS5Q8N5B7 392 aa13.88□□□□□ -0.19
DDX41-219ENST00000629036 FAM84BQ96KN1 310 aaPredicted RBP13.88□□□□□ -0.19
DDX41-219ENST00000629036 BEGAINQ9BUH8 593 aa13.88□□□□□ -0.19
DDX41-219ENST00000629036 ADARB2Q9NS39 739 aaKnown RBP13.88□□□□□ -0.19
DDX41-219ENST00000629036 PGAP2Q9UHJ9 254 aa13.88□□□□□ -0.19
DDX41-219ENST00000629036 THSD7BQ9C0I4 1608 aa13.88□□□□□ -0.19
DDX41-219ENST00000629036 USP17L3A6NCW0 530 aa13.87□□□□□ -0.19
DDX41-219ENST00000629036 USP17L4A6NCW7 530 aa13.87□□□□□ -0.19
DDX41-219ENST00000629036 METTL24Q5JXM2 366 aa13.87□□□□□ -0.19
DDX41-219ENST00000629036 STRIP1Q5VSL9 837 aa13.87□□□□□ -0.19
DDX41-219ENST00000629036 USP50Q70EL3 339 aaPredicted RBP13.87□□□□□ -0.19
DDX41-219ENST00000629036 USP17L1Q7RTZ2 530 aa13.87□□□□□ -0.19
DDX41-219ENST00000629036 FBXO33Q7Z6M2 555 aa13.87□□□□□ -0.19
DDX41-219ENST00000629036 PNMA8AQ86V59 439 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms