RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 SLC4A10Q6U841 1118 aa15.35■□□□□ 0.05
UBR1-212ENST00000627960 LMBR1LQ6UX01 489 aa15.35■□□□□ 0.05
UBR1-212ENST00000627960 PAXIP1Q6ZW49 1069 aaPredicted RBP15.35■□□□□ 0.05
UBR1-212ENST00000627960 SAPCD2Q86UD0 394 aa15.35■□□□□ 0.05
UBR1-212ENST00000627960 MRPL50Q8N5N7 158 aaKnown RBP15.35■□□□□ 0.05
UBR1-212ENST00000627960 DCPSQ96C86 337 aaKnown RBP15.35■□□□□ 0.05
UBR1-212ENST00000627960 CAPNS2Q96L46 248 aa15.35■□□□□ 0.05
UBR1-212ENST00000627960 COA1Q9GZY4 146 aa15.35■□□□□ 0.05
UBR1-212ENST00000627960 ZNF408Q9H9D4 720 aa15.35■□□□□ 0.05
UBR1-212ENST00000627960 CHMP3Q9Y3E7 222 aa15.35■□□□□ 0.05
UBR1-212ENST00000627960 USP17L8P0C7I0 530 aa15.34■□□□□ 0.05
UBR1-212ENST00000627960 DLK2Q6UY11 383 aa15.34■□□□□ 0.05
UBR1-212ENST00000627960 KRT26Q7Z3Y9 468 aa15.34■□□□□ 0.05
UBR1-212ENST00000627960 AIDAQ96BJ3 306 aa15.34■□□□□ 0.05
UBR1-212ENST00000627960 THSD7BQ9C0I4 1608 aa15.34■□□□□ 0.05
UBR1-212ENST00000627960 KLRK1P26718 216 aa15.33■□□□□ 0.04
UBR1-212ENST00000627960 KCNJ4P48050 445 aa15.33■□□□□ 0.04
UBR1-212ENST00000627960 MAP2K1Q02750 393 aaPredicted RBP15.33■□□□□ 0.04
UBR1-212ENST00000627960 DACT2Q5SW24 774 aa15.33■□□□□ 0.04
UBR1-212ENST00000627960 TNS4Q8IZW8 715 aa15.33■□□□□ 0.04
UBR1-212ENST00000627960 HHIPL1Q96JK4 782 aa15.33■□□□□ 0.04
UBR1-212ENST00000627960 ADM5C9JUS6 153 aa15.32■□□□□ 0.04
UBR1-212ENST00000627960 CCER2I3L3R5 266 aa15.32■□□□□ 0.04
UBR1-212ENST00000627960 TAF5LO75529 589 aa15.32■□□□□ 0.04
UBR1-212ENST00000627960 CTCFP49711 727 aaPredicted RBP15.32■□□□□ 0.04
UBR1-212ENST00000627960 GRM1Q13255 1194 aa15.32■□□□□ 0.04
UBR1-212ENST00000627960 SCARF1Q14162 830 aa15.32■□□□□ 0.04
UBR1-212ENST00000627960 CCDC57Q2TAC2 916 aa15.32■□□□□ 0.04
UBR1-212ENST00000627960 STRIP1Q5VSL9 837 aa15.32■□□□□ 0.04
UBR1-212ENST00000627960 HELBQ8NG08 1087 aaPredicted RBP15.32■□□□□ 0.04
UBR1-212ENST00000627960 SSH1Q8WYL5 1049 aa15.32■□□□□ 0.04
UBR1-212ENST00000627960 CDCA7LQ96GN5 454 aa15.32■□□□□ 0.04
UBR1-212ENST00000627960 MXD3Q9BW11 206 aa15.32■□□□□ 0.04
UBR1-212ENST00000627960 MYOZ2Q9NPC6 264 aa15.32■□□□□ 0.04
UBR1-212ENST00000627960 ASTN2O75129 1339 aaPredicted RBP15.32■□□□□ 0.04
UBR1-212ENST00000627960 MAP2K2P36507 400 aa15.31■□□□□ 0.04
UBR1-212ENST00000627960 C15orf52Q6ZUT6 534 aaKnown RBP15.31■□□□□ 0.04
UBR1-212ENST00000627960 SULF1Q8IWU6 871 aa15.31■□□□□ 0.04
UBR1-212ENST00000627960 TRMT2AQ8IZ69 625 aaKnown RBP15.31■□□□□ 0.04
UBR1-212ENST00000627960 FBXW7Q969H0 707 aa15.31■□□□□ 0.04
UBR1-212ENST00000627960 ZNF594Q96JF6 807 aaPredicted RBP15.31■□□□□ 0.04
UBR1-212ENST00000627960 PRDM10Q9NQV6 1147 aa15.31■□□□□ 0.04
UBR1-212ENST00000627960 GGA3Q9NZ52 723 aa15.31■□□□□ 0.04
UBR1-212ENST00000627960 UTYO14607 1347 aa15.31■□□□□ 0.04
UBR1-212ENST00000627960 PTPRCP08575 1304 aa15.31■□□□□ 0.04
UBR1-212ENST00000627960 MYO3BQ8WXR4 1341 aa15.31■□□□□ 0.04
UBR1-212ENST00000627960 IRS2Q9Y4H2 1338 aa15.31■□□□□ 0.04
UBR1-212ENST00000627960 SNAP23O00161 211 aa15.3■□□□□ 0.04
UBR1-212ENST00000627960 AOC2O75106 756 aa15.3■□□□□ 0.04
UBR1-212ENST00000627960 NBPF7P0C2Y1 421 aaPredicted RBP15.3■□□□□ 0.04
UBR1-212ENST00000627960 TAF7LQ5H9L4 462 aa15.3■□□□□ 0.04
UBR1-212ENST00000627960 ANGEL2Q5VTE6 544 aaKnown RBP15.3■□□□□ 0.04
UBR1-212ENST00000627960 TTLL5Q6EMB2 1281 aa15.3■□□□□ 0.04
UBR1-212ENST00000627960 LDHAL6AQ6ZMR3 332 aa15.3■□□□□ 0.04
UBR1-212ENST00000627960 KAZALD1Q96I82 304 aa15.3■□□□□ 0.04
UBR1-212ENST00000627960 SUCLG2Q96I99 432 aa15.3■□□□□ 0.04
UBR1-212ENST00000627960 CD209Q9NNX6 404 aa15.3■□□□□ 0.04
UBR1-212ENST00000627960 MMP14P50281 582 aa15.29■□□□□ 0.04
UBR1-212ENST00000627960 HUNKP57058 714 aa15.29■□□□□ 0.04
UBR1-212ENST00000627960 OGFOD1Q8N543 542 aa15.29■□□□□ 0.04
UBR1-212ENST00000627960 C2orf69Q8N8R5 385 aa15.29■□□□□ 0.04
UBR1-212ENST00000627960 GBA2Q9HCG7 927 aaPredicted RBP15.29■□□□□ 0.04
UBR1-212ENST00000627960 PITPNM2Q9BZ72 1349 aa15.28■□□□□ 0.04
UBR1-212ENST00000627960 HSPA8P11142 646 aaKnown RBP15.28■□□□□ 0.04
UBR1-212ENST00000627960 LBX1P52954 281 aa15.28■□□□□ 0.04
UBR1-212ENST00000627960 GTF2IP78347 998 aa15.28■□□□□ 0.04
UBR1-212ENST00000627960 ALDH1L2Q3SY69 923 aa15.28■□□□□ 0.04
UBR1-212ENST00000627960 CDCA5Q96FF9 252 aa15.28■□□□□ 0.04
UBR1-212ENST00000627960 CNNM1Q9NRU3 951 aa15.28■□□□□ 0.04
UBR1-212ENST00000627960 PLIN1O60240 522 aa15.27■□□□□ 0.04
UBR1-212ENST00000627960 NBPF9Q3BBW0 867 aa15.27■□□□□ 0.04
UBR1-212ENST00000627960 BEGAINQ9BUH8 593 aa15.27■□□□□ 0.04
UBR1-212ENST00000627960 IL1R1P14778 569 aa15.26■□□□□ 0.03
UBR1-212ENST00000627960 RABL6Q3YEC7 729 aaPredicted RBP15.26■□□□□ 0.03
UBR1-212ENST00000627960 RGMBQ6NW40 437 aa15.26■□□□□ 0.03
UBR1-212ENST00000627960 ZNF804AQ7Z570 1209 aa15.26■□□□□ 0.03
UBR1-212ENST00000627960 PUS3Q9BZE2 481 aaKnown RBP15.26■□□□□ 0.03
UBR1-212ENST00000627960 USP44Q9H0E7 712 aa15.26■□□□□ 0.03
UBR1-212ENST00000627960 BICC1Q9H694 974 aaKnown RBP15.26■□□□□ 0.03
UBR1-212ENST00000627960 HDAC9Q9UKV0 1011 aa15.26■□□□□ 0.03
UBR1-212ENST00000627960 WNT10BO00744 389 aa15.25■□□□□ 0.03
UBR1-212ENST00000627960 CT47B1P0C2W7 299 aaPredicted RBP15.25■□□□□ 0.03
UBR1-212ENST00000627960 UBE4AQ14139 1066 aa15.25■□□□□ 0.03
UBR1-212ENST00000627960 KIAA0825Q8IV33 1275 aa15.25■□□□□ 0.03
UBR1-212ENST00000627960 ANKRD44Q8N8A2 993 aa15.25■□□□□ 0.03
UBR1-212ENST00000627960 SMC4Q9NTJ3 1288 aa15.25■□□□□ 0.03
UBR1-212ENST00000627960 RIPOR2Q9Y4F9 1068 aa15.25■□□□□ 0.03
UBR1-212ENST00000627960 BRPF1P55201 1214 aaPredicted RBP15.24■□□□□ 0.03
UBR1-212ENST00000627960 NOGQ13253 232 aa15.24■□□□□ 0.03
UBR1-212ENST00000627960 CERS5Q8N5B7 392 aa15.24■□□□□ 0.03
UBR1-212ENST00000627960 CCDC102AQ96A19 550 aa15.24■□□□□ 0.03
UBR1-212ENST00000627960 ZBED3Q96IU2 234 aaPredicted RBP15.24■□□□□ 0.03
UBR1-212ENST00000627960 SCAF8Q9UPN6 1271 aaKnown RBP15.24■□□□□ 0.03
UBR1-212ENST00000627960 MROH5Q6ZUA9 1318 aa15.23■□□□□ 0.03
UBR1-212ENST00000627960 ECM29Q5VYK3 1845 aa15.23■□□□□ 0.03
UBR1-212ENST00000627960 FAM155AB1AL88 458 aaPredicted RBP15.23■□□□□ 0.03
UBR1-212ENST00000627960 SASH1O94885 1247 aa15.23■□□□□ 0.03
UBR1-212ENST00000627960 ZNF157P51786 506 aaPredicted RBP15.23■□□□□ 0.03
UBR1-212ENST00000627960 FKBP1AP62942 108 aaKnown RBP15.23■□□□□ 0.03
UBR1-212ENST00000627960 ZIC5Q96T25 663 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms