RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 BCL11AQ9H165 835 aa23.24■■□□□ 1.31
MECP2-216ENST00000627864 RNF181Q9P0P0 153 aa23.24■■□□□ 1.31
MECP2-216ENST00000627864 MED23Q9ULK4 1368 aa23.24■■□□□ 1.31
MECP2-216ENST00000627864 TIAM2Q8IVF5 1701 aa23.23■■□□□ 1.31
MECP2-216ENST00000627864 G3V3G9 751 aa23.23■■□□□ 1.31
MECP2-216ENST00000627864 IFIT1P09914 478 aaKnown RBP23.23■■□□□ 1.31
MECP2-216ENST00000627864 DCAF8Q5TAQ9 597 aa23.23■■□□□ 1.31
MECP2-216ENST00000627864 C9orf131Q5VYM1 1079 aa23.23■■□□□ 1.31
MECP2-216ENST00000627864 LPIN2Q92539 896 aa23.23■■□□□ 1.31
MECP2-216ENST00000627864 KIF1BPQ96EK5 621 aa23.23■■□□□ 1.31
MECP2-216ENST00000627864 MYH13Q9UKX3 1938 aa23.23■■□□□ 1.31
MECP2-216ENST00000627864 TIMM10P62072 90 aa23.22■■□□□ 1.31
MECP2-216ENST00000627864 DOK7Q18PE1 504 aa23.22■■□□□ 1.31
MECP2-216ENST00000627864 NEUROD6Q96NK8 337 aa23.22■■□□□ 1.31
MECP2-216ENST00000627864 IL1RAPL2Q9NP60 686 aa23.22■■□□□ 1.31
MECP2-216ENST00000627864 A0A1B0GUL7 405 aa23.21■■□□□ 1.31
MECP2-216ENST00000627864 TNNI3KQ59H18 835 aa23.21■■□□□ 1.31
MECP2-216ENST00000627864 C15orf52Q6ZUT6 534 aaKnown RBP23.21■■□□□ 1.31
MECP2-216ENST00000627864 JDP2Q8WYK2 163 aa23.21■■□□□ 1.31
MECP2-216ENST00000627864 GCC1Q96CN9 775 aa23.21■■□□□ 1.31
MECP2-216ENST00000627864 LRRCC1Q9C099 1032 aa23.21■■□□□ 1.31
MECP2-216ENST00000627864 GPR108Q9NPR9 543 aa23.21■■□□□ 1.31
MECP2-216ENST00000627864 FPGT-TNNI3KV9GXZ4 949 aa23.21■■□□□ 1.31
MECP2-216ENST00000627864 COL4A5P29400 1685 aa23.21■■□□□ 1.31
MECP2-216ENST00000627864 IRS2Q9Y4H2 1338 aa23.2■■□□□ 1.3
MECP2-216ENST00000627864 SMARCA5O60264 1052 aaPredicted RBP23.2■■□□□ 1.3
MECP2-216ENST00000627864 GYG1P46976 350 aa23.2■■□□□ 1.3
MECP2-216ENST00000627864 NIM1KQ8IY84 436 aa23.2■■□□□ 1.3
MECP2-216ENST00000627864 ZNF609O15014 1411 aa23.19■■□□□ 1.3
MECP2-216ENST00000627864 ERICH6BQ5W0A0 696 aa23.19■■□□□ 1.3
MECP2-216ENST00000627864 DBNDD1Q9H9R9 158 aa23.19■■□□□ 1.3
MECP2-216ENST00000627864 SCN9AQ15858 1988 aa23.19■■□□□ 1.3
MECP2-216ENST00000627864 ADORA1P30542 326 aa23.18■■□□□ 1.3
MECP2-216ENST00000627864 CAVIN4Q5BKX8 364 aa23.18■■□□□ 1.3
MECP2-216ENST00000627864 ZNF804AQ7Z570 1209 aa23.18■■□□□ 1.3
MECP2-216ENST00000627864 CLASRPQ8N2M8 674 aaKnown RBP23.18■■□□□ 1.3
MECP2-216ENST00000627864 EAF2Q96CJ1 260 aaPredicted RBP23.18■■□□□ 1.3
MECP2-216ENST00000627864 FAM84BQ96KN1 310 aaPredicted RBP23.18■■□□□ 1.3
MECP2-216ENST00000627864 PSME4Q14997 1843 aa23.17■■□□□ 1.3
MECP2-216ENST00000627864 ECE2O60344 883 aa23.17■■□□□ 1.3
MECP2-216ENST00000627864 HIBADHP31937 336 aaKnown RBP23.17■■□□□ 1.3
MECP2-216ENST00000627864 ANKRD45Q5TZF3 282 aa23.17■■□□□ 1.3
MECP2-216ENST00000627864 AACSQ86V21 672 aa23.17■■□□□ 1.3
MECP2-216ENST00000627864 VPS37DQ86XT2 251 aa23.17■■□□□ 1.3
MECP2-216ENST00000627864 SMC5Q8IY18 1101 aa23.17■■□□□ 1.3
MECP2-216ENST00000627864 XAGE2Q96GT9 111 aa23.17■■□□□ 1.3
MECP2-216ENST00000627864 COA1Q9GZY4 146 aa23.17■■□□□ 1.3
MECP2-216ENST00000627864 CCDC8Q9H0W5 538 aaPredicted RBP23.17■■□□□ 1.3
MECP2-216ENST00000627864 BCAMP50895 628 aa23.16■■□□□ 1.3
MECP2-216ENST00000627864 GORABQ5T7V8 394 aa23.16■■□□□ 1.3
MECP2-216ENST00000627864 B4GALNT3Q6L9W6 998 aa23.16■■□□□ 1.3
MECP2-216ENST00000627864 FBXO33Q7Z6M2 555 aa23.16■■□□□ 1.3
MECP2-216ENST00000627864 ZBTB47Q9UFB7 747 aaPredicted RBP23.16■■□□□ 1.3
MECP2-216ENST00000627864 ZNRF3Q9ULT6 936 aa23.16■■□□□ 1.3
MECP2-216ENST00000627864 CCDC136Q96JN2 1154 aa23.15■■□□□ 1.3
MECP2-216ENST00000627864 DBNDD2Q9BQY9 259 aa23.15■■□□□ 1.3
MECP2-216ENST00000627864 CD209Q9NNX6 404 aa23.15■■□□□ 1.3
MECP2-216ENST00000627864 GOLGB1Q14789 3259 aaKnown RBP23.14■■□□□ 1.3
MECP2-216ENST00000627864 IFIT2P09913 472 aaKnown RBP23.14■■□□□ 1.29
MECP2-216ENST00000627864 YDJCA8MPS7 323 aa23.13■■□□□ 1.29
MECP2-216ENST00000627864 PODNQ7Z5L7 613 aa23.13■■□□□ 1.29
MECP2-216ENST00000627864 PPP4R2Q9NY27 417 aa23.13■■□□□ 1.29
MECP2-216ENST00000627864 TLR7Q9NYK1 1049 aaKnown RBP23.13■■□□□ 1.29
MECP2-216ENST00000627864 IQSEC3Q9UPP2 1182 aaPredicted RBP23.13■■□□□ 1.29
MECP2-216ENST00000627864 FZD9O00144 591 aa23.12■■□□□ 1.29
MECP2-216ENST00000627864 PHKA1P46020 1223 aa23.12■■□□□ 1.29
MECP2-216ENST00000627864 EIF6P56537 245 aaKnown RBP23.12■■□□□ 1.29
MECP2-216ENST00000627864 CCDC102BQ68D86 513 aa23.12■■□□□ 1.29
MECP2-216ENST00000627864 KCNQ5Q9NR82 932 aa23.12■■□□□ 1.29
MECP2-216ENST00000627864 DBNLQ9UJU6 430 aaKnown RBP23.12■■□□□ 1.29
MECP2-216ENST00000627864 FRAT2O75474 233 aaPredicted RBP23.11■■□□□ 1.29
MECP2-216ENST00000627864 RAD17O75943 681 aa23.11■■□□□ 1.29
MECP2-216ENST00000627864 IL1R1P14778 569 aa23.11■■□□□ 1.29
MECP2-216ENST00000627864 TDRD7Q8NHU6 1098 aaKnown RBP23.11■■□□□ 1.29
MECP2-216ENST00000627864 FBXW7Q969H0 707 aa23.11■■□□□ 1.29
MECP2-216ENST00000627864 GNL3LQ9NVN8 582 aaKnown RBP23.11■■□□□ 1.29
MECP2-216ENST00000627864 ZNF646O15015 1829 aaPredicted RBP23.1■■□□□ 1.29
MECP2-216ENST00000627864 AKAP11Q9UKA4 1901 aa23.1■■□□□ 1.29
MECP2-216ENST00000627864 CXCL9Q07325 125 aa23.1■■□□□ 1.29
MECP2-216ENST00000627864 CCDC158Q5M9N0 1113 aa23.1■■□□□ 1.29
MECP2-216ENST00000627864 ZNF541Q9H0D2 1346 aa23.09■■□□□ 1.29
MECP2-216ENST00000627864 TTC39AQ5SRH9 613 aa23.09■■□□□ 1.29
MECP2-216ENST00000627864 CIAPIN1Q6FI81 312 aa23.09■■□□□ 1.29
MECP2-216ENST00000627864 C16orf71Q8IYS4 520 aaPredicted RBP23.09■■□□□ 1.29
MECP2-216ENST00000627864 ZC3H4Q9UPT8 1303 aaKnown RBP23.08■■□□□ 1.29
MECP2-216ENST00000627864 GTF2IP78347 998 aa23.08■■□□□ 1.29
MECP2-216ENST00000627864 NUCB1Q02818 461 aa23.08■■□□□ 1.29
MECP2-216ENST00000627864 LNPKQ9C0E8 428 aa23.08■■□□□ 1.29
MECP2-216ENST00000627864 USP17L3A6NCW0 530 aa23.07■■□□□ 1.28
MECP2-216ENST00000627864 USP17L4A6NCW7 530 aa23.07■■□□□ 1.28
MECP2-216ENST00000627864 CHAF1AQ13111 956 aaPredicted RBP23.07■■□□□ 1.28
MECP2-216ENST00000627864 TNIP1Q15025 636 aa23.07■■□□□ 1.28
MECP2-216ENST00000627864 TTLL5Q6EMB2 1281 aa23.07■■□□□ 1.28
MECP2-216ENST00000627864 CENPQQ7L2Z9 268 aaPredicted RBP23.07■■□□□ 1.28
MECP2-216ENST00000627864 USP17L1Q7RTZ2 530 aa23.07■■□□□ 1.28
MECP2-216ENST00000627864 CHD1LQ86WJ1 897 aa23.07■■□□□ 1.28
MECP2-216ENST00000627864 JAG2Q9Y219 1238 aa23.07■■□□□ 1.28
MECP2-216ENST00000627864 GJA3Q9Y6H8 435 aa23.07■■□□□ 1.28
MECP2-216ENST00000627864 KDM2BQ8NHM5 1336 aa23.07■■□□□ 1.28
MECP2-216ENST00000627864 PSMD14O00487 310 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms