RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 AACSQ86V21 672 aa12.19□□□□□ -0.46
SOX2-OT-244ENST00000627738 ZNF687Q8N1G0 1237 aa12.19□□□□□ -0.46
SOX2-OT-244ENST00000627738 SETDB2Q96T68 719 aa12.19□□□□□ -0.46
SOX2-OT-244ENST00000627738 GREM2Q9H772 168 aa12.19□□□□□ -0.46
SOX2-OT-244ENST00000627738 STAP2Q9UGK3 403 aa12.19□□□□□ -0.46
SOX2-OT-244ENST00000627738 ANKRD18BA2A2Z9 1011 aa12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 EYA2O00167 538 aa12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 IFIT2P09913 472 aaKnown RBP12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 HSP90B1P14625 803 aaKnown RBP12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 ITGA6P23229 1130 aa12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 TFCP2Q12800 502 aa12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 ZNF827Q17R98 1081 aa12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 ERFEQ4G0M1 354 aa12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 LRRC24Q50LG9 513 aa12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 TAF7LQ5H9L4 462 aa12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 ATG9AQ7Z3C6 839 aa12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 RNF166Q96A37 237 aaPredicted RBP12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 EAF2Q96CJ1 260 aaPredicted RBP12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 CCDC8Q9H0W5 538 aaPredicted RBP12.18□□□□□ -0.46
SOX2-OT-244ENST00000627738 MYH3P11055 1940 aa12.17□□□□□ -0.46
SOX2-OT-244ENST00000627738 AOX1Q06278 1338 aa12.17□□□□□ -0.46
SOX2-OT-244ENST00000627738 CIAO1O76071 339 aa12.17□□□□□ -0.46
SOX2-OT-244ENST00000627738 IL15P40933 162 aaPredicted RBP12.17□□□□□ -0.46
SOX2-OT-244ENST00000627738 PUS3Q9BZE2 481 aaKnown RBP12.17□□□□□ -0.46
SOX2-OT-244ENST00000627738 NYXQ9GZU5 481 aa12.17□□□□□ -0.46
SOX2-OT-244ENST00000627738 DDX60Q8IY21 1712 aaKnown RBP12.17□□□□□ -0.46
SOX2-OT-244ENST00000627738 SDSP20132 328 aa12.16□□□□□ -0.46
SOX2-OT-244ENST00000627738 GTF2E1P29083 439 aaPredicted RBP12.16□□□□□ -0.46
SOX2-OT-244ENST00000627738 TNNI3KQ59H18 835 aa12.16□□□□□ -0.46
SOX2-OT-244ENST00000627738 NBPF5PQ86XG9 351 aaPredicted RBP12.16□□□□□ -0.46
SOX2-OT-244ENST00000627738 PI4K2BQ8TCG2 481 aa12.16□□□□□ -0.46
SOX2-OT-244ENST00000627738 TFCP2L1Q9NZI6 479 aa12.16□□□□□ -0.46
SOX2-OT-244ENST00000627738 FPGT-TNNI3KV9GXZ4 949 aa12.16□□□□□ -0.46
SOX2-OT-244ENST00000627738 COL24A1Q17RW2 1714 aa12.16□□□□□ -0.46
SOX2-OT-244ENST00000627738 LAMB2P55268 1798 aa12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 TTC41PQ6P2S7 1318 aa12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 CDC45O75419 566 aa12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 GYS1P13807 737 aa12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 MLLT3P42568 568 aaPredicted RBP12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 NFIXQ14938 502 aa12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 CCDC152Q4G0S7 254 aa12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 SLC10A5Q5PT55 438 aa12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 TPTE2Q6XPS3 522 aa12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 GPATCH3Q96I76 525 aa12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 ECHDC1Q9NTX5 307 aa12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 TLR7Q9NYK1 1049 aaKnown RBP12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 ABCC12Q96J65 1359 aa12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 RGPD3A6NKT7 1758 aaPredicted RBP12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 RGPD4Q7Z3J3 1758 aa12.15□□□□□ -0.46
SOX2-OT-244ENST00000627738 EZH2Q15910 746 aaKnown RBP12.14□□□□□ -0.47
SOX2-OT-244ENST00000627738 LDHAL6AQ6ZMR3 332 aa12.14□□□□□ -0.47
SOX2-OT-244ENST00000627738 TBC1D9Q6ZT07 1266 aa12.14□□□□□ -0.47
SOX2-OT-244ENST00000627738 CAMKK2Q96RR4 588 aa12.14□□□□□ -0.47
SOX2-OT-244ENST00000627738 GPR108Q9NPR9 543 aa12.14□□□□□ -0.47
SOX2-OT-244ENST00000627738 SEC31BQ9NQW1 1179 aa12.14□□□□□ -0.47
SOX2-OT-244ENST00000627738 CEP126Q9P2H0 1117 aa12.14□□□□□ -0.47
SOX2-OT-244ENST00000627738 CARMIL3Q8ND23 1372 aa12.14□□□□□ -0.47
SOX2-OT-244ENST00000627738 TRIM6-TRIM34B2RNG4 842 aa12.13□□□□□ -0.47
SOX2-OT-244ENST00000627738 ERC2O15083 957 aa12.13□□□□□ -0.47
SOX2-OT-244ENST00000627738 GLRX3O76003 335 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-244ENST00000627738 MAP4K4O95819 1239 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-244ENST00000627738 SF3B3Q15393 1217 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-244ENST00000627738 COL23A1Q86Y22 540 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-244ENST00000627738 CCDC24Q8N4L8 307 aa12.13□□□□□ -0.47
SOX2-OT-244ENST00000627738 CNNM1Q9NRU3 951 aa12.13□□□□□ -0.47
SOX2-OT-244ENST00000627738 DBNLQ9UJU6 430 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-244ENST00000627738 RIPOR2Q9Y4F9 1068 aa12.13□□□□□ -0.47
SOX2-OT-244ENST00000627738 RTL9Q8NET4 1388 aa12.13□□□□□ -0.47
SOX2-OT-244ENST00000627738 TUBGCP6Q96RT7 1819 aa12.12□□□□□ -0.47
SOX2-OT-244ENST00000627738 NPHP1O15259 732 aa12.12□□□□□ -0.47
SOX2-OT-244ENST00000627738 TM4SF1P30408 202 aa12.12□□□□□ -0.47
SOX2-OT-244ENST00000627738 MFAP1P55081 439 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-244ENST00000627738 SF3B2Q13435 895 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-244ENST00000627738 METTL24Q5JXM2 366 aa12.12□□□□□ -0.47
SOX2-OT-244ENST00000627738 FLAD1Q8NFF5 587 aa12.12□□□□□ -0.47
SOX2-OT-244ENST00000627738 RILPL2Q969X0 211 aa12.12□□□□□ -0.47
SOX2-OT-244ENST00000627738 NEUROD6Q96NK8 337 aa12.12□□□□□ -0.47
SOX2-OT-244ENST00000627738 NLRP3Q96P20 1036 aa12.12□□□□□ -0.47
SOX2-OT-244ENST00000627738 DBNDD2Q9BQY9 259 aa12.12□□□□□ -0.47
SOX2-OT-244ENST00000627738 ZNF609O15014 1411 aa12.11□□□□□ -0.47
SOX2-OT-244ENST00000627738 RIC1Q4ADV7 1423 aa12.11□□□□□ -0.47
SOX2-OT-244ENST00000627738 A0A1B0GUL7 405 aa12.11□□□□□ -0.47
SOX2-OT-244ENST00000627738 TBC1D12O60347 775 aa12.11□□□□□ -0.47
SOX2-OT-244ENST00000627738 IGHMBP2P38935 993 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-244ENST00000627738 TIMM10P62072 90 aa12.11□□□□□ -0.47
SOX2-OT-244ENST00000627738 AKAP2Q9Y2D5 859 aa12.11□□□□□ -0.47
SOX2-OT-244ENST00000627738 LRP5O75197 1615 aa12.11□□□□□ -0.47
SOX2-OT-244ENST00000627738 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
SOX2-OT-244ENST00000627738 SERPINB2P05120 415 aa12.1□□□□□ -0.47
SOX2-OT-244ENST00000627738 BAG6P46379 1132 aa12.1□□□□□ -0.47
SOX2-OT-244ENST00000627738 PRR5LQ6MZQ0 368 aa12.1□□□□□ -0.47
SOX2-OT-244ENST00000627738 CASC1Q6TDU7 716 aa12.1□□□□□ -0.47
SOX2-OT-244ENST00000627738 CNTROBQ8N137 903 aa12.1□□□□□ -0.47
SOX2-OT-244ENST00000627738 CNBD1Q8NA66 436 aa12.1□□□□□ -0.47
SOX2-OT-244ENST00000627738 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-244ENST00000627738 MPHOSPH8Q99549 860 aa12.1□□□□□ -0.47
SOX2-OT-244ENST00000627738 BOLA2Q9H3K6 86 aa12.1□□□□□ -0.47
SOX2-OT-244ENST00000627738 UPF2Q9HAU5 1272 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms