RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 CRHR2Q13324 411 aa11.28□□□□□ -0.6
TCF4-258ENST00000627320 IFNL1Q8IU54 200 aa11.28□□□□□ -0.6
TCF4-258ENST00000627320 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
TCF4-258ENST00000627320 ANGEL1Q9UNK9 670 aaKnown RBP11.28□□□□□ -0.6
TCF4-258ENST00000627320 PTCH2Q9Y6C5 1203 aa11.28□□□□□ -0.6
TCF4-258ENST00000627320 UNC80Q8N2C7 3258 aa11.28□□□□□ -0.6
TCF4-258ENST00000627320 TCIRG1Q13488 830 aa11.27□□□□□ -0.61
TCF4-258ENST00000627320 NOM1Q5C9Z4 860 aaKnown RBP11.27□□□□□ -0.61
TCF4-258ENST00000627320 FBXW7Q969H0 707 aa11.27□□□□□ -0.61
TCF4-258ENST00000627320 ARMC5Q96C12 935 aa11.27□□□□□ -0.61
TCF4-258ENST00000627320 LRCH3Q96II8 777 aa11.27□□□□□ -0.61
TCF4-258ENST00000627320 ZNF333Q96JL9 665 aa11.27□□□□□ -0.61
TCF4-258ENST00000627320 CFHR5Q9BXR6 569 aa11.27□□□□□ -0.61
TCF4-258ENST00000627320 WNT10BO00744 389 aa11.26□□□□□ -0.61
TCF4-258ENST00000627320 USP17L8P0C7I0 530 aa11.26□□□□□ -0.61
TCF4-258ENST00000627320 SREBF2Q12772 1141 aa11.26□□□□□ -0.61
TCF4-258ENST00000627320 SH3TC2Q8TF17 1288 aa11.26□□□□□ -0.61
TCF4-258ENST00000627320 SHISA4Q96DD7 197 aa11.26□□□□□ -0.61
TCF4-258ENST00000627320 PTPN18Q99952 460 aa11.26□□□□□ -0.61
TCF4-258ENST00000627320 ARHGAP39Q9C0H5 1083 aa11.26□□□□□ -0.61
TCF4-258ENST00000627320 PITPNM2Q9BZ72 1349 aa11.26□□□□□ -0.61
TCF4-258ENST00000627320 KLRK1P26718 216 aa11.25□□□□□ -0.61
TCF4-258ENST00000627320 PPP2R1AP30153 589 aa11.25□□□□□ -0.61
TCF4-258ENST00000627320 WNK4Q96J92 1243 aa11.25□□□□□ -0.61
TCF4-258ENST00000627320 EYA3Q99504 573 aa11.25□□□□□ -0.61
TCF4-258ENST00000627320 ZC3H12CQ9C0D7 883 aaKnown RBP11.25□□□□□ -0.61
TCF4-258ENST00000627320 MGAMO43451 1857 aa11.24□□□□□ -0.61
TCF4-258ENST00000627320 G3V3G9 751 aa11.24□□□□□ -0.61
TCF4-258ENST00000627320 HTATSF1O43719 755 aaKnown RBP11.24□□□□□ -0.61
TCF4-258ENST00000627320 SF3B3Q15393 1217 aaKnown RBP11.24□□□□□ -0.61
TCF4-258ENST00000627320 LDLRAD1Q5T700 205 aa11.24□□□□□ -0.61
TCF4-258ENST00000627320 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
TCF4-258ENST00000627320 TXNRD3Q86VQ6 643 aa11.24□□□□□ -0.61
TCF4-258ENST00000627320 AGBL3Q8NEM8 1001 aa11.24□□□□□ -0.61
TCF4-258ENST00000627320 TSPYL4Q9UJ04 414 aa11.24□□□□□ -0.61
TCF4-258ENST00000627320 ARAP2Q8WZ64 1704 aa11.23□□□□□ -0.61
TCF4-258ENST00000627320 RPS8P62241 208 aaKnown RBP11.23□□□□□ -0.61
TCF4-258ENST00000627320 INTS3Q68E01 1043 aaKnown RBP11.23□□□□□ -0.61
TCF4-258ENST00000627320 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
TCF4-258ENST00000627320 PLEKHF1Q96S99 279 aa11.23□□□□□ -0.61
TCF4-258ENST00000627320 ISCA1Q9BUE6 129 aa11.23□□□□□ -0.61
TCF4-258ENST00000627320 PCGF6Q9BYE7 350 aa11.23□□□□□ -0.61
TCF4-258ENST00000627320 EFCC1Q9HA90 598 aa11.23□□□□□ -0.61
TCF4-258ENST00000627320 CHPF2Q9P2E5 772 aa11.23□□□□□ -0.61
TCF4-258ENST00000627320 ANKIB1Q9P2G1 1089 aa11.23□□□□□ -0.61
TCF4-258ENST00000627320 GGA1Q9UJY5 639 aa11.23□□□□□ -0.61
TCF4-258ENST00000627320 ERBB4Q15303 1308 aa11.23□□□□□ -0.61
TCF4-258ENST00000627320 USP17L3A6NCW0 530 aa11.22□□□□□ -0.61
TCF4-258ENST00000627320 USP17L4A6NCW7 530 aa11.22□□□□□ -0.61
TCF4-258ENST00000627320 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
TCF4-258ENST00000627320 IRS4O14654 1257 aaPredicted RBP11.22□□□□□ -0.61
TCF4-258ENST00000627320 MTFR1Q15390 333 aa11.22□□□□□ -0.61
TCF4-258ENST00000627320 DACT2Q5SW24 774 aa11.22□□□□□ -0.61
TCF4-258ENST00000627320 USP17L1Q7RTZ2 530 aa11.22□□□□□ -0.61
TCF4-258ENST00000627320 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
TCF4-258ENST00000627320 CFAP53Q96M91 514 aa11.22□□□□□ -0.61
TCF4-258ENST00000627320 PRO3102Q9H379 93 aa11.22□□□□□ -0.61
TCF4-258ENST00000627320 PODXL2Q9NZ53 605 aa11.22□□□□□ -0.61
TCF4-258ENST00000627320 NFE2L2Q16236 605 aa11.21□□□□□ -0.61
TCF4-258ENST00000627320 SLC4A8Q2Y0W8 1093 aa11.21□□□□□ -0.61
TCF4-258ENST00000627320 KIAA0825Q8IV33 1275 aa11.21□□□□□ -0.61
TCF4-258ENST00000627320 PNISRQ8TF01 805 aaKnown RBP11.21□□□□□ -0.61
TCF4-258ENST00000627320 ERO1AQ96HE7 468 aa11.21□□□□□ -0.61
TCF4-258ENST00000627320 MANSC4A6NHS7 340 aaPredicted RBP11.2□□□□□ -0.62
TCF4-258ENST00000627320 CTGFP29279 349 aa11.2□□□□□ -0.62
TCF4-258ENST00000627320 SP3Q02447 781 aa11.2□□□□□ -0.62
TCF4-258ENST00000627320 SLC9C1Q4G0N8 1177 aa11.2□□□□□ -0.62
TCF4-258ENST00000627320 HSP90AB3PQ58FF7 597 aa11.2□□□□□ -0.62
TCF4-258ENST00000627320 Q7L0L9 218 aa11.2□□□□□ -0.62
TCF4-258ENST00000627320 ARMC9Q7Z3E5 817 aa11.2□□□□□ -0.62
TCF4-258ENST00000627320 TMEM106CQ9BVX2 250 aa11.2□□□□□ -0.62
TCF4-258ENST00000627320 NUDCQ9Y266 331 aa11.2□□□□□ -0.62
TCF4-258ENST00000627320 SPTBN5Q9NRC6 3674 aaKnown RBP11.2□□□□□ -0.62
TCF4-258ENST00000627320 CLRN2A0PK11 232 aa11.19□□□□□ -0.62
TCF4-258ENST00000627320 NF2P35240 595 aa11.19□□□□□ -0.62
TCF4-258ENST00000627320 NBPF12Q5TAG4 269 aaPredicted RBP11.19□□□□□ -0.62
TCF4-258ENST00000627320 DPF3Q92784 378 aa11.19□□□□□ -0.62
TCF4-258ENST00000627320 SLC10A4Q96EP9 437 aa11.19□□□□□ -0.62
TCF4-258ENST00000627320 ZBED3Q96IU2 234 aaPredicted RBP11.19□□□□□ -0.62
TCF4-258ENST00000627320 ELP3Q9H9T3 547 aa11.19□□□□□ -0.62
TCF4-258ENST00000627320 JAG2Q9Y219 1238 aa11.19□□□□□ -0.62
TCF4-258ENST00000627320 EYSQ5T1H1 3165 aa11.18□□□□□ -0.62
TCF4-258ENST00000627320 SNAP23O00161 211 aa11.18□□□□□ -0.62
TCF4-258ENST00000627320 TIMELESSQ9UNS1 1208 aa11.18□□□□□ -0.62
TCF4-258ENST00000627320 VCANP13611 3396 aa11.17□□□□□ -0.62
TCF4-258ENST00000627320 XDHP47989 1333 aa11.17□□□□□ -0.62
TCF4-258ENST00000627320 ALDH1A1P00352 501 aa11.17□□□□□ -0.62
TCF4-258ENST00000627320 FAM43AQ8N2R8 423 aa11.17□□□□□ -0.62
TCF4-258ENST00000627320 CERS5Q8N5B7 392 aa11.17□□□□□ -0.62
TCF4-258ENST00000627320 PLBD2Q8NHP8 589 aa11.17□□□□□ -0.62
TCF4-258ENST00000627320 BRI3BPQ8WY22 251 aa11.17□□□□□ -0.62
TCF4-258ENST00000627320 DEFB129Q9H1M3 183 aa11.17□□□□□ -0.62
TCF4-258ENST00000627320 MED23Q9ULK4 1368 aa11.16□□□□□ -0.62
TCF4-258ENST00000627320 DOCK3Q8IZD9 2030 aa11.16□□□□□ -0.62
TCF4-258ENST00000627320 F8W031 263 aaPredicted RBP11.16□□□□□ -0.62
TCF4-258ENST00000627320 USP2O75604 605 aaPredicted RBP11.16□□□□□ -0.62
TCF4-258ENST00000627320 COL25A1Q9BXS0 654 aaPredicted RBP11.16□□□□□ -0.62
TCF4-258ENST00000627320 PHAXQ9H814 394 aaKnown RBP11.16□□□□□ -0.62
TCF4-258ENST00000627320 ZBTB48P10074 688 aaPredicted RBP11.15□□□□□ -0.62
TCF4-258ENST00000627320 TAF1CQ15572 869 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms