RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 FDX1P10109 184 aa8.33□□□□□ -1.08
TCF4-249ENST00000625716 NDUFV2P19404 249 aa8.33□□□□□ -1.08
TCF4-249ENST00000625716 CALD1Q05682 793 aaKnown RBP8.33□□□□□ -1.08
TCF4-249ENST00000625716 AMHR2Q16671 573 aa8.33□□□□□ -1.08
TCF4-249ENST00000625716 C10orf71Q711Q0 1435 aa8.33□□□□□ -1.08
TCF4-249ENST00000625716 CCDC24Q8N4L8 307 aa8.33□□□□□ -1.08
TCF4-249ENST00000625716 NGEFQ8N5V2 710 aa8.33□□□□□ -1.08
TCF4-249ENST00000625716 MOXD2PA6NHM9 499 aa8.32□□□□□ -1.08
TCF4-249ENST00000625716 H0YIN7 160 aa8.32□□□□□ -1.08
TCF4-249ENST00000625716 J3QL48 77 aa8.32□□□□□ -1.08
TCF4-249ENST00000625716 APAF1O14727 1248 aa8.32□□□□□ -1.08
TCF4-249ENST00000625716 EIF2S2P20042 333 aaKnown RBP8.32□□□□□ -1.08
TCF4-249ENST00000625716 DALRD3Q5D0E6 543 aaKnown RBP8.32□□□□□ -1.08
TCF4-249ENST00000625716 TBC1D9BQ66K14 1250 aa8.32□□□□□ -1.08
TCF4-249ENST00000625716 CLEC4GQ6UXB4 293 aa8.32□□□□□ -1.08
TCF4-249ENST00000625716 KIF6Q6ZMV9 814 aa8.32□□□□□ -1.08
TCF4-249ENST00000625716 RETREG3Q86VR2 466 aa8.32□□□□□ -1.08
TCF4-249ENST00000625716 SNIP1Q8TAD8 396 aaKnown RBP8.32□□□□□ -1.08
TCF4-249ENST00000625716 MRS2Q9HD23 443 aa8.32□□□□□ -1.08
TCF4-249ENST00000625716 PXDNLA1KZ92 1463 aa8.32□□□□□ -1.08
TCF4-249ENST00000625716 TTC24A2A3L6 582 aaPredicted RBP8.31□□□□□ -1.08
TCF4-249ENST00000625716 CAMTA2O94983 1202 aa8.31□□□□□ -1.08
TCF4-249ENST00000625716 MYL6BP14649 208 aa8.31□□□□□ -1.08
TCF4-249ENST00000625716 GTF2E1P29083 439 aaPredicted RBP8.31□□□□□ -1.08
TCF4-249ENST00000625716 PDE6BP35913 854 aa8.31□□□□□ -1.08
TCF4-249ENST00000625716 SMCPP49901 116 aaPredicted RBP8.31□□□□□ -1.08
TCF4-249ENST00000625716 ST5P78524 1137 aa8.31□□□□□ -1.08
TCF4-249ENST00000625716 NBPF10Q6P3W6 841 aaKnown RBP8.31□□□□□ -1.08
TCF4-249ENST00000625716 ARHGAP27Q6ZUM4 889 aa8.31□□□□□ -1.08
TCF4-249ENST00000625716 NBPF5PQ86XG9 351 aaPredicted RBP8.31□□□□□ -1.08
TCF4-249ENST00000625716 C2CD5Q86YS7 1000 aa8.31□□□□□ -1.08
TCF4-249ENST00000625716 NBPF15Q8N660 670 aa8.31□□□□□ -1.08
TCF4-249ENST00000625716 CNBD1Q8NA66 436 aa8.31□□□□□ -1.08
TCF4-249ENST00000625716 CARMIL3Q8ND23 1372 aa8.31□□□□□ -1.08
TCF4-249ENST00000625716 CHL1O00533 1208 aa8.3□□□□□ -1.08
TCF4-249ENST00000625716 CHRNA5P30532 468 aa8.3□□□□□ -1.08
TCF4-249ENST00000625716 TPTE2Q6XPS3 522 aa8.3□□□□□ -1.08
TCF4-249ENST00000625716 GIGYF2Q6Y7W6 1299 aaKnown RBP8.3□□□□□ -1.08
TCF4-249ENST00000625716 ZNF784Q8NCA9 323 aaPredicted RBP8.3□□□□□ -1.08
TCF4-249ENST00000625716 BRIP1Q9BX63 1249 aa8.3□□□□□ -1.08
TCF4-249ENST00000625716 GMPR2Q9P2T1 348 aaKnown RBP8.3□□□□□ -1.08
TCF4-249ENST00000625716 NIP7Q9Y221 180 aaKnown RBP eCLIP8.3□□□□□ -1.08
TCF4-249ENST00000625716 DLG5Q8TDM6 1919 aa8.3□□□□□ -1.08
TCF4-249ENST00000625716 ERBB4Q15303 1308 aa8.29□□□□□ -1.08
TCF4-249ENST00000625716 FAM177BA6PVY3 158 aa8.29□□□□□ -1.08
TCF4-249ENST00000625716 ERVV-1B6SEH8 477 aa8.29□□□□□ -1.08
TCF4-249ENST00000625716 AXIN1O15169 862 aa8.29□□□□□ -1.08
TCF4-249ENST00000625716 KCNA3P22001 575 aa8.29□□□□□ -1.08
TCF4-249ENST00000625716 GNAI1P63096 354 aa8.29□□□□□ -1.08
TCF4-249ENST00000625716 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
TCF4-249ENST00000625716 PRR5LQ6MZQ0 368 aa8.29□□□□□ -1.08
TCF4-249ENST00000625716 ZNF622Q969S3 477 aaKnown RBP eCLIP8.29□□□□□ -1.085e-7■□□□□ 11.2
TCF4-249ENST00000625716 C6orf229H3BNL8 230 aa8.28□□□□□ -1.08
TCF4-249ENST00000625716 TTLL12Q14166 644 aaPredicted RBP8.28□□□□□ -1.08
TCF4-249ENST00000625716 CTC1Q2NKJ3 1217 aa8.28□□□□□ -1.08
TCF4-249ENST00000625716 CCDC184Q52MB2 194 aa8.28□□□□□ -1.08
TCF4-249ENST00000625716 TTLL6Q8N841 843 aa8.28□□□□□ -1.08
TCF4-249ENST00000625716 HPS1Q92902 700 aa8.28□□□□□ -1.08
TCF4-249ENST00000625716 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
TCF4-249ENST00000625716 CHMP4AQ9BY43 222 aa8.28□□□□□ -1.08
TCF4-249ENST00000625716 NYXQ9GZU5 481 aa8.28□□□□□ -1.08
TCF4-249ENST00000625716 ZBTB3Q9H5J0 574 aa8.28□□□□□ -1.08
TCF4-249ENST00000625716 IFT57Q9NWB7 429 aa8.28□□□□□ -1.08
TCF4-249ENST00000625716 MAP3K15Q6ZN16 1313 aa8.28□□□□□ -1.08
TCF4-249ENST00000625716 KDM3BQ7LBC6 1761 aa8.27□□□□□ -1.08
TCF4-249ENST00000625716 KIF13BQ9NQT8 1826 aa8.27□□□□□ -1.09
TCF4-249ENST00000625716 TRIM66O15016 1216 aa8.27□□□□□ -1.09
TCF4-249ENST00000625716 HOXB7P09629 217 aa8.27□□□□□ -1.09
TCF4-249ENST00000625716 WNT7BP56706 349 aa8.27□□□□□ -1.09
TCF4-249ENST00000625716 AIMP1Q12904 312 aaKnown RBP8.27□□□□□ -1.09
TCF4-249ENST00000625716 HLFQ16534 295 aa8.27□□□□□ -1.09
TCF4-249ENST00000625716 HDGFL1Q5TGJ6 251 aa8.27□□□□□ -1.09
TCF4-249ENST00000625716 TTLL7Q6ZT98 887 aa8.27□□□□□ -1.09
TCF4-249ENST00000625716 PARP9Q8IXQ6 854 aa8.27□□□□□ -1.09
TCF4-249ENST00000625716 CNKSR1Q969H4 720 aa8.27□□□□□ -1.09
TCF4-249ENST00000625716 BEGAINQ9BUH8 593 aa8.27□□□□□ -1.09
TCF4-249ENST00000625716 MBIPQ9NS73 344 aa8.27□□□□□ -1.09
TCF4-249ENST00000625716 N4BP2Q86UW6 1770 aaPredicted RBP8.27□□□□□ -1.09
TCF4-249ENST00000625716 SIAH2O43255 324 aa8.26□□□□□ -1.09
TCF4-249ENST00000625716 MS4A1P11836 297 aa8.26□□□□□ -1.09
TCF4-249ENST00000625716 GPTP24298 496 aa8.26□□□□□ -1.09
TCF4-249ENST00000625716 KRT24Q2M2I5 525 aa8.26□□□□□ -1.09
TCF4-249ENST00000625716 HSP90AB3PQ58FF7 597 aa8.26□□□□□ -1.09
TCF4-249ENST00000625716 DUSP27Q5VZP5 1158 aa8.26□□□□□ -1.09
TCF4-249ENST00000625716 PPP1R42Q7Z4L9 355 aa8.26□□□□□ -1.09
TCF4-249ENST00000625716 FAM9BQ8IZU0 186 aa8.26□□□□□ -1.09
TCF4-249ENST00000625716 ZNF526Q8TF50 670 aaPredicted RBP8.26□□□□□ -1.09
TCF4-249ENST00000625716 MASTLQ96GX5 879 aa8.26□□□□□ -1.09
TCF4-249ENST00000625716 GPBP1L1Q9HC44 474 aaPredicted RBP8.26□□□□□ -1.09
TCF4-249ENST00000625716 DDX21Q9NR30 783 aaKnown RBP eCLIP8.26□□□□□ -1.09
TCF4-249ENST00000625716 DBF4Q9UBU7 674 aaPredicted RBP8.26□□□□□ -1.09
TCF4-249ENST00000625716 CHD4Q14839 1912 aa8.26□□□□□ -1.09
TCF4-249ENST00000625716 SCN7AQ01118 1682 aa8.26□□□□□ -1.09
TCF4-249ENST00000625716 LAMB4A4D0S4 1761 aa8.25□□□□□ -1.09
TCF4-249ENST00000625716 SENP3-EIF4A1A0A087X0R7 540 aa8.25□□□□□ -1.09
TCF4-249ENST00000625716 ELL2O00472 640 aaPredicted RBP8.25□□□□□ -1.09
TCF4-249ENST00000625716 ANXA1P04083 346 aa8.25□□□□□ -1.09
TCF4-249ENST00000625716 ZNF853P0CG23 659 aa8.25□□□□□ -1.09
TCF4-249ENST00000625716 CCDC27Q2M243 656 aa8.25□□□□□ -1.09
TCF4-249ENST00000625716 PARP10Q53GL7 1025 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms