RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 CASZ1Q86V15 1759 aa23.57■■□□□ 1.36
TREX1-205ENST00000625293 GNPATO15228 680 aa23.57■■□□□ 1.36
TREX1-205ENST00000625293 CPA1P15085 419 aa23.57■■□□□ 1.36
TREX1-205ENST00000625293 RNF20Q5VTR2 975 aa23.57■■□□□ 1.36
TREX1-205ENST00000625293 ZNF512BQ96KM6 892 aaPredicted RBP23.57■■□□□ 1.36
TREX1-205ENST00000625293 ZDHHC9Q9Y397 364 aa23.57■■□□□ 1.36
TREX1-205ENST00000625293 PDE8BO95263 885 aa23.56■■□□□ 1.36
TREX1-205ENST00000625293 CCDC129Q6ZRS4 1044 aa23.56■■□□□ 1.36
TREX1-205ENST00000625293 SCN7AQ01118 1682 aa23.56■■□□□ 1.36
TREX1-205ENST00000625293 SCARF1Q14162 830 aa23.55■■□□□ 1.36
TREX1-205ENST00000625293 GORABQ5T7V8 394 aa23.55■■□□□ 1.36
TREX1-205ENST00000625293 LIMCH1Q9UPQ0 1083 aa23.55■■□□□ 1.36
TREX1-205ENST00000625293 CYP46A1Q9Y6A2 500 aa23.55■■□□□ 1.36
TREX1-205ENST00000625293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.55■■□□□ 1.36
TREX1-205ENST00000625293 RNF113AO15541 343 aaKnown RBP23.55■■□□□ 1.36
TREX1-205ENST00000625293 HSP90B1P14625 803 aaKnown RBP23.55■■□□□ 1.36
TREX1-205ENST00000625293 PDRG1Q9NUG6 133 aa23.55■■□□□ 1.36
TREX1-205ENST00000625293 TAF6LQ9Y6J9 622 aa23.55■■□□□ 1.36
TREX1-205ENST00000625293 MROH5Q6ZUA9 1318 aa23.54■■□□□ 1.36
TREX1-205ENST00000625293 FAM177BA6PVY3 158 aa23.54■■□□□ 1.36
TREX1-205ENST00000625293 BAG4O95429 457 aaKnown RBP23.54■■□□□ 1.36
TREX1-205ENST00000625293 FGFR2P21802 821 aa23.54■■□□□ 1.36
TREX1-205ENST00000625293 PSMA5P28066 241 aa23.54■■□□□ 1.36
TREX1-205ENST00000625293 U3KPZ7 1027 aaPredicted RBP23.54■■□□□ 1.36
TREX1-205ENST00000625293 SLFNL1Q499Z3 407 aa23.53■■□□□ 1.36
TREX1-205ENST00000625293 TRAK2O60296 914 aa23.52■■□□□ 1.36
TREX1-205ENST00000625293 RPS6KA4O75676 772 aa23.52■■□□□ 1.36
TREX1-205ENST00000625293 CCDC152Q4G0S7 254 aa23.52■■□□□ 1.36
TREX1-205ENST00000625293 ALDH8A1Q9H2A2 487 aaPredicted RBP23.52■■□□□ 1.36
TREX1-205ENST00000625293 BCL2L12Q9HB09 334 aa23.52■■□□□ 1.36
TREX1-205ENST00000625293 SPON1Q9HCB6 807 aa23.52■■□□□ 1.36
TREX1-205ENST00000625293 ARAP2Q8WZ64 1704 aa23.52■■□□□ 1.36
TREX1-205ENST00000625293 FKBP4Q02790 459 aaKnown RBP eCLIP23.52■■□□□ 1.36
TREX1-205ENST00000625293 COL9A3Q14050 684 aaPredicted RBP23.52■■□□□ 1.36
TREX1-205ENST00000625293 MSL1Q68DK7 614 aa23.52■■□□□ 1.36
TREX1-205ENST00000625293 DSCC1Q9BVC3 393 aa23.52■■□□□ 1.36
TREX1-205ENST00000625293 SEC31BQ9NQW1 1179 aa23.52■■□□□ 1.36
TREX1-205ENST00000625293 MAST3O60307 1309 aa23.51■■□□□ 1.35
TREX1-205ENST00000625293 PTMSP20962 102 aa23.51■■□□□ 1.35
TREX1-205ENST00000625293 PTGER2P43116 358 aa23.51■■□□□ 1.35
TREX1-205ENST00000625293 ZAP70P43403 619 aa23.51■■□□□ 1.35
TREX1-205ENST00000625293 UBR3Q6ZT12 1888 aa23.5■■□□□ 1.35
TREX1-205ENST00000625293 BRD1O95696 1058 aa23.5■■□□□ 1.35
TREX1-205ENST00000625293 MCAMP43121 646 aa23.5■■□□□ 1.35
TREX1-205ENST00000625293 PUM3Q15397 648 aaKnown RBP23.5■■□□□ 1.35
TREX1-205ENST00000625293 LARGE1O95461 756 aa23.5■■□□□ 1.35
TREX1-205ENST00000625293 ZFYP08048 801 aaPredicted RBP23.5■■□□□ 1.35
TREX1-205ENST00000625293 RPS6KB1P23443 525 aa23.5■■□□□ 1.35
TREX1-205ENST00000625293 KRT32Q14532 448 aa23.5■■□□□ 1.35
TREX1-205ENST00000625293 LPIN2Q92539 896 aa23.5■■□□□ 1.35
TREX1-205ENST00000625293 MTFR1LQ9H019 292 aa23.5■■□□□ 1.35
TREX1-205ENST00000625293 NARFQ9UHQ1 456 aa23.5■■□□□ 1.35
TREX1-205ENST00000625293 ARID4AP29374 1257 aaPredicted RBP23.49■■□□□ 1.35
TREX1-205ENST00000625293 LRRFIP1Q32MZ4 808 aaKnown RBP23.49■■□□□ 1.35
TREX1-205ENST00000625293 ZSCAN31Q96LW9 406 aaPredicted RBP23.49■■□□□ 1.35
TREX1-205ENST00000625293 RTCBQ9Y3I0 505 aaKnown RBP23.49■■□□□ 1.35
TREX1-205ENST00000625293 AKAP11Q9UKA4 1901 aa23.48■■□□□ 1.35
TREX1-205ENST00000625293 BLOC1S2Q6QNY1 142 aa23.48■■□□□ 1.35
TREX1-205ENST00000625293 PI16Q6UXB8 463 aa23.48■■□□□ 1.35
TREX1-205ENST00000625293 ARHGEF1Q92888 912 aaKnown RBP23.48■■□□□ 1.35
TREX1-205ENST00000625293 OSBP2Q969R2 916 aa23.48■■□□□ 1.35
TREX1-205ENST00000625293 SH2B1Q9NRF2 756 aaPredicted RBP23.48■■□□□ 1.35
TREX1-205ENST00000625293 M0R2C6 588 aa23.47■■□□□ 1.35
TREX1-205ENST00000625293 CYP21A2P08686 494 aa23.47■■□□□ 1.35
TREX1-205ENST00000625293 CCDC102BQ68D86 513 aa23.47■■□□□ 1.35
TREX1-205ENST00000625293 SGIP1Q9BQI5 828 aa23.47■■□□□ 1.35
TREX1-205ENST00000625293 SF3B3Q15393 1217 aaKnown RBP23.47■■□□□ 1.35
TREX1-205ENST00000625293 ERFEQ4G0M1 354 aa23.47■■□□□ 1.35
TREX1-205ENST00000625293 MPHOSPH8Q99549 860 aa23.47■■□□□ 1.35
TREX1-205ENST00000625293 LARP6Q9BRS8 491 aaKnown RBP23.47■■□□□ 1.35
TREX1-205ENST00000625293 QSER1Q2KHR3 1735 aa23.47■■□□□ 1.35
TREX1-205ENST00000625293 COL4A1P02462 1669 aa23.46■■□□□ 1.35
TREX1-205ENST00000625293 COL24A1Q17RW2 1714 aa23.46■■□□□ 1.35
TREX1-205ENST00000625293 HSPD1P10809 573 aaKnown RBP23.46■■□□□ 1.35
TREX1-205ENST00000625293 PHKA1P46020 1223 aa23.46■■□□□ 1.35
TREX1-205ENST00000625293 ST3GAL1Q11201 340 aa23.46■■□□□ 1.35
TREX1-205ENST00000625293 SLC10A5Q5PT55 438 aa23.46■■□□□ 1.35
TREX1-205ENST00000625293 TRAPPC3LQ5T215 181 aa23.46■■□□□ 1.35
TREX1-205ENST00000625293 TBC1D9BQ66K14 1250 aa23.46■■□□□ 1.35
TREX1-205ENST00000625293 HELBQ8NG08 1087 aaPredicted RBP23.46■■□□□ 1.35
TREX1-205ENST00000625293 UQCRFS1P1P0C7P4 283 aa23.45■■□□□ 1.34
TREX1-205ENST00000625293 IGHMBP2P38935 993 aaKnown RBP23.45■■□□□ 1.34
TREX1-205ENST00000625293 C3orf67Q6ZVT6 689 aa23.45■■□□□ 1.34
TREX1-205ENST00000625293 FLAD1Q8NFF5 587 aa23.45■■□□□ 1.34
TREX1-205ENST00000625293 SLC16A10Q8TF71 515 aa23.45■■□□□ 1.34
TREX1-205ENST00000625293 APPBP2Q92624 585 aa23.45■■□□□ 1.34
TREX1-205ENST00000625293 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.45■■□□□ 1.34
TREX1-205ENST00000625293 GOLGA6L22H0YM25 854 aa23.44■■□□□ 1.34
TREX1-205ENST00000625293 SLC5A1P13866 664 aa23.44■■□□□ 1.34
TREX1-205ENST00000625293 HMGB2P26583 209 aaKnown RBP23.44■■□□□ 1.34
TREX1-205ENST00000625293 TOB2Q14106 344 aaPredicted RBP23.44■■□□□ 1.34
TREX1-205ENST00000625293 ANKRD1Q15327 319 aa23.44■■□□□ 1.34
TREX1-205ENST00000625293 ME3Q16798 604 aa23.44■■□□□ 1.34
TREX1-205ENST00000625293 SKOR2Q2VWA4 1001 aaPredicted RBP23.44■■□□□ 1.34
TREX1-205ENST00000625293 NEK1Q96PY6 1258 aa23.44■■□□□ 1.34
TREX1-205ENST00000625293 SRP68Q9UHB9 627 aaKnown RBP23.44■■□□□ 1.34
TREX1-205ENST00000625293 TPCN1Q9ULQ1 816 aa23.44■■□□□ 1.34
TREX1-205ENST00000625293 FOXP2O15409 715 aa23.43■■□□□ 1.34
TREX1-205ENST00000625293 STOX1Q6ZVD7 989 aa23.43■■□□□ 1.34
TREX1-205ENST00000625293 TTF1Q15361 905 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms