RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 CCT4P50991 539 aaKnown RBP24.3■■□□□ 1.48
SMN1-211ENST00000625245 MXD3Q9BW11 206 aa24.3■■□□□ 1.48
SMN1-211ENST00000625245 SCAF8Q9UPN6 1271 aaKnown RBP24.3■■□□□ 1.48
SMN1-211ENST00000625245 MED23Q9ULK4 1368 aa24.29■■□□□ 1.48
SMN1-211ENST00000625245 H7C1W4 665 aa24.29■■□□□ 1.48
SMN1-211ENST00000625245 TRPA1O75762 1119 aa24.29■■□□□ 1.48
SMN1-211ENST00000625245 SLC10A3P09131 477 aa24.29■■□□□ 1.48
SMN1-211ENST00000625245 IGHMBP2P38935 993 aaKnown RBP24.29■■□□□ 1.48
SMN1-211ENST00000625245 CCDC27Q2M243 656 aa24.29■■□□□ 1.48
SMN1-211ENST00000625245 MLLT1Q03111 559 aaPredicted RBP24.28■■□□□ 1.48
SMN1-211ENST00000625245 RNF186Q9NXI6 227 aa24.28■■□□□ 1.48
SMN1-211ENST00000625245 SAGE1Q9NXZ1 904 aa24.27■■□□□ 1.48
SMN1-211ENST00000625245 GCKRQ14397 625 aa24.26■■□□□ 1.47
SMN1-211ENST00000625245 NBPF9Q3BBW0 867 aa24.26■■□□□ 1.47
SMN1-211ENST00000625245 DACT2Q5SW24 774 aa24.26■■□□□ 1.47
SMN1-211ENST00000625245 OGFOD1Q8N543 542 aa24.26■■□□□ 1.47
SMN1-211ENST00000625245 CSRNP1Q96S65 589 aa24.26■■□□□ 1.47
SMN1-211ENST00000625245 PITPNM2Q9BZ72 1349 aa24.26■■□□□ 1.47
SMN1-211ENST00000625245 ITGA6P23229 1130 aa24.25■■□□□ 1.47
SMN1-211ENST00000625245 FLIIQ13045 1269 aa24.25■■□□□ 1.47
SMN1-211ENST00000625245 FKBP5Q13451 457 aaPredicted RBP24.25■■□□□ 1.47
SMN1-211ENST00000625245 PRAMEF18Q5VWM3 479 aa24.25■■□□□ 1.47
SMN1-211ENST00000625245 TXNRD3Q86VQ6 643 aa24.25■■□□□ 1.47
SMN1-211ENST00000625245 RASAL3Q86YV0 1011 aa24.25■■□□□ 1.47
SMN1-211ENST00000625245 MPHOSPH8Q99549 860 aa24.25■■□□□ 1.47
SMN1-211ENST00000625245 COA1Q9GZY4 146 aa24.25■■□□□ 1.47
SMN1-211ENST00000625245 LEMD3Q9Y2U8 911 aa24.25■■□□□ 1.47
SMN1-211ENST00000625245 RGS19P49795 217 aa24.24■■□□□ 1.47
SMN1-211ENST00000625245 FKBP1BP68106 108 aa24.24■■□□□ 1.47
SMN1-211ENST00000625245 TTLL12Q14166 644 aaPredicted RBP24.24■■□□□ 1.47
SMN1-211ENST00000625245 MOB2Q70IA6 237 aa24.24■■□□□ 1.47
SMN1-211ENST00000625245 MYH16Q9H6N6 1097 aa24.24■■□□□ 1.47
SMN1-211ENST00000625245 SALL2Q9Y467 1007 aaPredicted RBP24.24■■□□□ 1.47
SMN1-211ENST00000625245 UBE2Q2LH0YL09 131 aa24.23■■□□□ 1.47
SMN1-211ENST00000625245 STRIP1Q5VSL9 837 aa24.23■■□□□ 1.47
SMN1-211ENST00000625245 DNAAF4Q8WXU2 420 aa24.23■■□□□ 1.47
SMN1-211ENST00000625245 PLA2G12BQ9BX93 195 aa24.23■■□□□ 1.47
SMN1-211ENST00000625245 ANKRD2Q9GZV1 360 aa24.23■■□□□ 1.47
SMN1-211ENST00000625245 ZNF804BA4D1E1 1349 aa24.23■■□□□ 1.47
SMN1-211ENST00000625245 IL16Q14005 1332 aa24.23■■□□□ 1.47
SMN1-211ENST00000625245 PAPPA2Q9BXP8 1791 aa24.23■■□□□ 1.47
SMN1-211ENST00000625245 CACNA1FO60840 1977 aa24.23■■□□□ 1.47
SMN1-211ENST00000625245 MYO3BQ8WXR4 1341 aa24.22■■□□□ 1.47
SMN1-211ENST00000625245 KCNJ4P48050 445 aa24.22■■□□□ 1.47
SMN1-211ENST00000625245 TTLL5Q6EMB2 1281 aa24.22■■□□□ 1.47
SMN1-211ENST00000625245 WNT10BO00744 389 aa24.21■■□□□ 1.47
SMN1-211ENST00000625245 KLRK1P26718 216 aa24.21■■□□□ 1.47
SMN1-211ENST00000625245 REM2Q8IYK8 340 aaPredicted RBP24.21■■□□□ 1.47
SMN1-211ENST00000625245 FANCIQ9NVI1 1328 aa24.2■■□□□ 1.46
SMN1-211ENST00000625245 ZNF646O15015 1829 aaPredicted RBP24.2■■□□□ 1.46
SMN1-211ENST00000625245 SASH1O94885 1247 aa24.2■■□□□ 1.46
SMN1-211ENST00000625245 CASP7P55210 303 aa24.2■■□□□ 1.46
SMN1-211ENST00000625245 LINS1Q8NG48 757 aa24.2■■□□□ 1.46
SMN1-211ENST00000625245 MRS2Q9HD23 443 aa24.2■■□□□ 1.46
SMN1-211ENST00000625245 CSF1RP07333 972 aa24.19■■□□□ 1.46
SMN1-211ENST00000625245 GTF2IP78347 998 aa24.19■■□□□ 1.46
SMN1-211ENST00000625245 CHRNDQ07001 517 aa24.19■■□□□ 1.46
SMN1-211ENST00000625245 KIAA0825Q8IV33 1275 aa24.19■■□□□ 1.46
SMN1-211ENST00000625245 ANKRD18BA2A2Z9 1011 aa24.18■■□□□ 1.46
SMN1-211ENST00000625245 NF2P35240 595 aa24.18■■□□□ 1.46
SMN1-211ENST00000625245 HDAC9Q9UKV0 1011 aa24.18■■□□□ 1.46
SMN1-211ENST00000625245 CHMP3Q9Y3E7 222 aa24.18■■□□□ 1.46
SMN1-211ENST00000625245 VAMP4O75379 141 aa24.17■■□□□ 1.46
SMN1-211ENST00000625245 EXOSC9Q06265 439 aaKnown RBP24.16■■□□□ 1.46
SMN1-211ENST00000625245 F6X3S4 739 aa24.15■■□□□ 1.46
SMN1-211ENST00000625245 SNAP23O00161 211 aa24.15■■□□□ 1.46
SMN1-211ENST00000625245 TAF5LO75529 589 aa24.15■■□□□ 1.46
SMN1-211ENST00000625245 MMP14P50281 582 aa24.15■■□□□ 1.46
SMN1-211ENST00000625245 MKRN3Q13064 507 aaKnown RBP24.15■■□□□ 1.46
SMN1-211ENST00000625245 PRKG1Q13976 671 aa24.15■■□□□ 1.46
SMN1-211ENST00000625245 NCBP3Q53F19 620 aaKnown RBP24.15■■□□□ 1.46
SMN1-211ENST00000625245 HELBQ8NG08 1087 aaPredicted RBP24.15■■□□□ 1.46
SMN1-211ENST00000625245 CD209Q9NNX6 404 aa24.15■■□□□ 1.46
SMN1-211ENST00000625245 IFIT5Q13325 482 aaKnown RBP24.14■■□□□ 1.45
SMN1-211ENST00000625245 APOBEC3FQ8IUX4 373 aaKnown RBP24.14■■□□□ 1.45
SMN1-211ENST00000625245 WDR63Q8IWG1 891 aa24.14■■□□□ 1.45
SMN1-211ENST00000625245 CTU1Q7Z7A3 348 aaKnown RBP24.13■■□□□ 1.45
SMN1-211ENST00000625245 TBC1D8O95759 1140 aa24.12■■□□□ 1.45
SMN1-211ENST00000625245 FOXO4P98177 505 aa24.12■■□□□ 1.45
SMN1-211ENST00000625245 ARMC9Q7Z3E5 817 aa24.12■■□□□ 1.45
SMN1-211ENST00000625245 SOX10P56693 466 aa24.11■■□□□ 1.45
SMN1-211ENST00000625245 PTPN12Q05209 780 aaKnown RBP24.11■■□□□ 1.45
SMN1-211ENST00000625245 DLGAP5Q15398 846 aa24.11■■□□□ 1.45
SMN1-211ENST00000625245 ANP32CO43423 234 aa24.1■■□□□ 1.45
SMN1-211ENST00000625245 PLIN1O60240 522 aa24.1■■□□□ 1.45
SMN1-211ENST00000625245 BEND3Q5T5X7 828 aa24.1■■□□□ 1.45
SMN1-211ENST00000625245 ZBED3Q96IU2 234 aaPredicted RBP24.1■■□□□ 1.45
SMN1-211ENST00000625245 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.1■■□□□ 1.45
SMN1-211ENST00000625245 F8W031 263 aaPredicted RBP24.09■■□□□ 1.45
SMN1-211ENST00000625245 TAF7LQ5H9L4 462 aa24.09■■□□□ 1.45
SMN1-211ENST00000625245 LMBR1LQ6UX01 489 aa24.09■■□□□ 1.45
SMN1-211ENST00000625245 ZNF804AQ7Z570 1209 aa24.09■■□□□ 1.45
SMN1-211ENST00000625245 ANGEL1Q9UNK9 670 aaKnown RBP24.09■■□□□ 1.45
SMN1-211ENST00000625245 TM4SF4P48230 202 aa24.08■■□□□ 1.45
SMN1-211ENST00000625245 CERS5Q8N5B7 392 aa24.08■■□□□ 1.45
SMN1-211ENST00000625245 ZNF296Q8WUU4 475 aaPredicted RBP24.08■■□□□ 1.45
SMN1-211ENST00000625245 ZNF594Q96JF6 807 aaPredicted RBP24.08■■□□□ 1.45
SMN1-211ENST00000625245 A0A1B0GUL6 1792 aa24.07■■□□□ 1.44
SMN1-211ENST00000625245 CCDC57Q2TAC2 916 aa24.07■■□□□ 1.44
SMN1-211ENST00000625245 EPHA10Q5JZY3 1008 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms