RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 AMPHP49418 695 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 LONRF2Q1L5Z9 754 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 DRC1Q96MC2 740 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 WDR24Q96S15 920 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 FUT8Q9BYC5 575 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 PCDHA7Q9UN72 937 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 SIGLEC1Q9BZZ2 1709 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 PIK3C2BO00750 1634 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 SLC3A2P08195 630 aaKnown RBP17.56■□□□□ 0.4
PMS1-221ENST00000624204 UBASH3AP57075 661 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 WWC2Q6AWC2 1192 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 STK38Q15208 465 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 UBXN6Q9BZV1 441 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 PDE11AQ9HCR9 933 aa17.56■□□□□ 0.4
PMS1-221ENST00000624204 TLR7Q9NYK1 1049 aaKnown RBP17.56■□□□□ 0.4
PMS1-221ENST00000624204 HECW2Q9P2P5 1572 aa17.55■□□□□ 0.4
PMS1-221ENST00000624204 LOC102724159A0A0B4J2E5 919 aa17.55■□□□□ 0.4
PMS1-221ENST00000624204 PTPDC1A2A3K4 754 aa17.55■□□□□ 0.4
PMS1-221ENST00000624204 KARSQ15046 597 aaKnown RBP17.55■□□□□ 0.4
PMS1-221ENST00000624204 PWP2Q15269 919 aaKnown RBP17.55■□□□□ 0.4
PMS1-221ENST00000624204 TTC31Q49AM3 519 aaPredicted RBP17.55■□□□□ 0.4
PMS1-221ENST00000624204 ERC1Q8IUD2 1116 aa17.55■□□□□ 0.4
PMS1-221ENST00000624204 USP42Q9H9J4 1324 aaKnown RBP17.55■□□□□ 0.4
PMS1-221ENST00000624204 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
PMS1-221ENST00000624204 ZSCAN12O43309 604 aa17.55■□□□□ 0.4
PMS1-221ENST00000624204 FOXR1Q6PIV2 292 aa17.55■□□□□ 0.4
PMS1-221ENST00000624204 CTR9Q6PD62 1173 aa17.54■□□□□ 0.4
PMS1-221ENST00000624204 CHPF2Q9P2E5 772 aa17.54■□□□□ 0.4
PMS1-221ENST00000624204 A0A1B0GUL7 405 aa17.54■□□□□ 0.4
PMS1-221ENST00000624204 FMR1NBQ8N0W7 255 aaPredicted RBP17.54■□□□□ 0.4
PMS1-221ENST00000624204 EAF2Q96CJ1 260 aaPredicted RBP17.54■□□□□ 0.4
PMS1-221ENST00000624204 TOP1P11387 765 aaKnown RBP17.54■□□□□ 0.4
PMS1-221ENST00000624204 DPF2Q92785 391 aa17.54■□□□□ 0.4
PMS1-221ENST00000624204 ATG3Q9NT62 314 aa17.54■□□□□ 0.4
PMS1-221ENST00000624204 HMG20BQ9P0W2 317 aa17.54■□□□□ 0.4
PMS1-221ENST00000624204 PUF60Q9UHX1 559 aaKnown RBP17.54■□□□□ 0.4
PMS1-221ENST00000624204 JRKLQ9Y4A0 524 aa17.54■□□□□ 0.4
PMS1-221ENST00000624204 KCNJ6P48051 423 aa17.53■□□□□ 0.4
PMS1-221ENST00000624204 E2F4Q16254 413 aa17.53■□□□□ 0.4
PMS1-221ENST00000624204 PPP2R2CQ9Y2T4 447 aa17.53■□□□□ 0.4
PMS1-221ENST00000624204 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
PMS1-221ENST00000624204 APOBRQ0VD83 1088 aa17.53■□□□□ 0.4
PMS1-221ENST00000624204 G3BP1Q13283 466 aaKnown RBP eCLIP17.53■□□□□ 0.4
PMS1-221ENST00000624204 EYA1Q99502 592 aa17.53■□□□□ 0.4
PMS1-221ENST00000624204 KRT32Q14532 448 aa17.53■□□□□ 0.4
PMS1-221ENST00000624204 SART3Q15020 963 aaKnown RBP17.53■□□□□ 0.4
PMS1-221ENST00000624204 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
PMS1-221ENST00000624204 GOLGA1Q92805 767 aa17.53■□□□□ 0.4
PMS1-221ENST00000624204 GJB4Q9NTQ9 266 aa17.53■□□□□ 0.4
PMS1-221ENST00000624204 ALKQ9UM73 1620 aa17.53■□□□□ 0.4
PMS1-221ENST00000624204 NPHP4O75161 1426 aaPredicted RBP17.52■□□□□ 0.4
PMS1-221ENST00000624204 VWA3AA6NCI4 1184 aa17.52■□□□□ 0.4
PMS1-221ENST00000624204 NSUN7Q8NE18 718 aaKnown RBP17.52■□□□□ 0.4
PMS1-221ENST00000624204 CCDC12Q8WUD4 166 aaPredicted RBP17.52■□□□□ 0.4
PMS1-221ENST00000624204 MPHOSPH8Q99549 860 aa17.52■□□□□ 0.4
PMS1-221ENST00000624204 HINFPQ9BQA5 517 aa17.52■□□□□ 0.4
PMS1-221ENST00000624204 IVLP07476 585 aa17.52■□□□□ 0.4
PMS1-221ENST00000624204 PPARDQ03181 441 aa17.52■□□□□ 0.4
PMS1-221ENST00000624204 DHX58Q96C10 678 aa17.52■□□□□ 0.4
PMS1-221ENST00000624204 TAF5LO75529 589 aa17.52■□□□□ 0.39
PMS1-221ENST00000624204 PSME1Q06323 249 aa17.52■□□□□ 0.39
PMS1-221ENST00000624204 DHX8Q14562 1220 aaKnown RBP17.52■□□□□ 0.39
PMS1-221ENST00000624204 PACS2Q86VP3 889 aa17.52■□□□□ 0.39
PMS1-221ENST00000624204 DHX37Q8IY37 1157 aaKnown RBP17.52■□□□□ 0.39
PMS1-221ENST00000624204 IL17REQ8NFR9 667 aa17.52■□□□□ 0.39
PMS1-221ENST00000624204 CCDC102AQ96A19 550 aa17.52■□□□□ 0.39
PMS1-221ENST00000624204 TMEM232C9JQI7 657 aa17.51■□□□□ 0.39
PMS1-221ENST00000624204 NAA16Q6N069 864 aaPredicted RBP17.51■□□□□ 0.39
PMS1-221ENST00000624204 DESI2Q9BSY9 194 aa17.51■□□□□ 0.39
PMS1-221ENST00000624204 N4BP1O75113 896 aaKnown RBP17.51■□□□□ 0.39
PMS1-221ENST00000624204 CWF19L2Q2TBE0 894 aaKnown RBP17.51■□□□□ 0.39
PMS1-221ENST00000624204 NCAPHQ15003 741 aa17.5■□□□□ 0.39
PMS1-221ENST00000624204 RABGGTAQ92696 567 aa17.5■□□□□ 0.39
PMS1-221ENST00000624204 FAN1Q9Y2M0 1017 aa17.5■□□□□ 0.39
PMS1-221ENST00000624204 EIF3CLB5ME19 914 aaKnown RBP17.5■□□□□ 0.39
PMS1-221ENST00000624204 NLRP12P59046 1061 aa17.5■□□□□ 0.39
PMS1-221ENST00000624204 MAP3K9P80192 1104 aa17.5■□□□□ 0.39
PMS1-221ENST00000624204 CPLX3Q8WVH0 158 aa17.5■□□□□ 0.39
PMS1-221ENST00000624204 EIF3CQ99613 913 aaKnown RBP17.5■□□□□ 0.39
PMS1-221ENST00000624204 MARCKSP29966 332 aaPredicted RBP17.5■□□□□ 0.39
PMS1-221ENST00000624204 ADALQ6DHV7 355 aa17.5■□□□□ 0.39
PMS1-221ENST00000624204 GDAP1L1Q96MZ0 367 aa17.5■□□□□ 0.39
PMS1-221ENST00000624204 SLC26A8Q96RN1 970 aa17.5■□□□□ 0.39
PMS1-221ENST00000624204 SUGCTQ9HAC7 445 aa17.5■□□□□ 0.39
PMS1-221ENST00000624204 MRFAP1Q9Y605 127 aa17.5■□□□□ 0.39
PMS1-221ENST00000624204 JAKMIP3Q5VZ66 844 aa17.49■□□□□ 0.39
PMS1-221ENST00000624204 ALDH8A1Q9H2A2 487 aaPredicted RBP17.49■□□□□ 0.39
PMS1-221ENST00000624204 CLIC4Q9Y696 253 aa17.49■□□□□ 0.39
PMS1-221ENST00000624204 ZNF202O95125 648 aa17.49■□□□□ 0.39
PMS1-221ENST00000624204 TXLNAP40222 546 aa17.49■□□□□ 0.39
PMS1-221ENST00000624204 DEF6Q9H4E7 631 aa17.49■□□□□ 0.39
PMS1-221ENST00000624204 PSD3Q9NYI0 1048 aa17.49■□□□□ 0.39
PMS1-221ENST00000624204 TFRCP02786 760 aaKnown RBP17.49■□□□□ 0.39
PMS1-221ENST00000624204 CYP21A2P08686 494 aa17.49■□□□□ 0.39
PMS1-221ENST00000624204 IRX2Q9BZI1 471 aaPredicted RBP17.49■□□□□ 0.39
PMS1-221ENST00000624204 YY1AP1Q9H869 796 aa17.49■□□□□ 0.39
PMS1-221ENST00000624204 MYO5BQ9ULV0 1848 aa17.48■□□□□ 0.39
PMS1-221ENST00000624204 CCDC151A5D8V7 595 aa17.48■□□□□ 0.39
PMS1-221ENST00000624204 ARHGAP6O43182 974 aa17.48■□□□□ 0.39
PMS1-221ENST00000624204 CBFA2T2O43439 604 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms