RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 CYP4F22Q6NT55 531 aa12.89□□□□□ -0.35
PCDHGC3-207ENST00000622656 ZC3H15Q8WU90 426 aaKnown RBP12.89□□□□□ -0.35
PCDHGC3-207ENST00000622656 MPHOSPH8Q99549 860 aa12.89□□□□□ -0.35
PCDHGC3-207ENST00000622656 ZNF408Q9H9D4 720 aa12.89□□□□□ -0.35
PCDHGC3-207ENST00000622656 C9orf78Q9NZ63 289 aaPredicted RBP12.89□□□□□ -0.35
PCDHGC3-207ENST00000622656 SCAF8Q9UPN6 1271 aaKnown RBP12.89□□□□□ -0.35
PCDHGC3-207ENST00000622656 ZNF804BA4D1E1 1349 aa12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 ZNF609O15014 1411 aa12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 USP17L3A6NCW0 530 aa12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 USP17L4A6NCW7 530 aa12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 FOXN1O15353 648 aa12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 CELF2O95319 508 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 ZNF280AP59817 542 aaPredicted RBP12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 IFIT5Q13325 482 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 KIF4BQ2VIQ3 1234 aa12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 USP17L1Q7RTZ2 530 aa12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 PODNQ7Z5L7 613 aa12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 PUS3Q9BZE2 481 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 LEMD3Q9Y2U8 911 aa12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 TLL2Q9Y6L7 1015 aa12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 UTYO14607 1347 aa12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 WDR33Q9C0J8 1336 aaKnown RBP12.88□□□□□ -0.35
PCDHGC3-207ENST00000622656 GRM1Q13255 1194 aa12.87□□□□□ -0.35
PCDHGC3-207ENST00000622656 CDC37L1Q7L3B6 337 aa12.87□□□□□ -0.35
PCDHGC3-207ENST00000622656 MIER1Q8N108 512 aa12.87□□□□□ -0.35
PCDHGC3-207ENST00000622656 AGBL3Q8NEM8 1001 aa12.87□□□□□ -0.35
PCDHGC3-207ENST00000622656 GGA3Q9NZ52 723 aa12.87□□□□□ -0.35
PCDHGC3-207ENST00000622656 PLIN1O60240 522 aa12.86□□□□□ -0.35
PCDHGC3-207ENST00000622656 SAPCD2Q86UD0 394 aa12.86□□□□□ -0.35
PCDHGC3-207ENST00000622656 TNS4Q8IZW8 715 aa12.86□□□□□ -0.35
PCDHGC3-207ENST00000622656 ANKRD44Q8N8A2 993 aa12.86□□□□□ -0.35
PCDHGC3-207ENST00000622656 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
PCDHGC3-207ENST00000622656 CAPNS2Q96L46 248 aa12.86□□□□□ -0.35
PCDHGC3-207ENST00000622656 ANKRD2Q9GZV1 360 aa12.86□□□□□ -0.35
PCDHGC3-207ENST00000622656 COA1Q9GZY4 146 aa12.86□□□□□ -0.35
PCDHGC3-207ENST00000622656 BICC1Q9H694 974 aaKnown RBP12.86□□□□□ -0.35
PCDHGC3-207ENST00000622656 AOC2O75106 756 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 USP17L8P0C7I0 530 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 GTF2IP78347 998 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 SCARF1Q14162 830 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 CCDC57Q2TAC2 916 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 LDHAL6AQ6ZMR3 332 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 KRT26Q7Z3Y9 468 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 USP44Q9H0E7 712 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 CD209Q9NNX6 404 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 MYOZ2Q9NPC6 264 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 SMC4Q9NTJ3 1288 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 WBP1LQ9NX94 342 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 PTPRCP08575 1304 aa12.85□□□□□ -0.35
PCDHGC3-207ENST00000622656 KCNJ4P48050 445 aa12.84□□□□□ -0.35
PCDHGC3-207ENST00000622656 NBPF9Q3BBW0 867 aa12.84□□□□□ -0.35
PCDHGC3-207ENST00000622656 ALDH1L2Q3SY69 923 aa12.84□□□□□ -0.35
PCDHGC3-207ENST00000622656 RABL6Q3YEC7 729 aaPredicted RBP12.84□□□□□ -0.35
PCDHGC3-207ENST00000622656 ANGEL2Q5VTE6 544 aaKnown RBP12.84□□□□□ -0.35
PCDHGC3-207ENST00000622656 TTLL5Q6EMB2 1281 aa12.84□□□□□ -0.35
PCDHGC3-207ENST00000622656 CERS5Q8N5B7 392 aa12.84□□□□□ -0.35
PCDHGC3-207ENST00000622656 KLHDC4Q8TBB5 520 aa12.84□□□□□ -0.35
PCDHGC3-207ENST00000622656 ZIC5Q96T25 663 aa12.84□□□□□ -0.35
PCDHGC3-207ENST00000622656 JAG2Q9Y219 1238 aa12.84□□□□□ -0.35
PCDHGC3-207ENST00000622656 ECM29Q5VYK3 1845 aa12.83□□□□□ -0.35
PCDHGC3-207ENST00000622656 LRRC24Q50LG9 513 aa12.83□□□□□ -0.36
PCDHGC3-207ENST00000622656 TAF7LQ5H9L4 462 aa12.83□□□□□ -0.36
PCDHGC3-207ENST00000622656 STRIP1Q5VSL9 837 aa12.83□□□□□ -0.36
PCDHGC3-207ENST00000622656 PRAMEF18Q5VWM3 479 aa12.83□□□□□ -0.36
PCDHGC3-207ENST00000622656 C15orf52Q6ZUT6 534 aaKnown RBP12.83□□□□□ -0.36
PCDHGC3-207ENST00000622656 DCPSQ96C86 337 aaKnown RBP12.83□□□□□ -0.36
PCDHGC3-207ENST00000622656 CNNM1Q9NRU3 951 aa12.83□□□□□ -0.36
PCDHGC3-207ENST00000622656 NOB1Q9ULX3 412 aaKnown RBP12.83□□□□□ -0.36
PCDHGC3-207ENST00000622656 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
PCDHGC3-207ENST00000622656 RIPOR2Q9Y4F9 1068 aa12.83□□□□□ -0.36
PCDHGC3-207ENST00000622656 PCDHAC2Q9Y5I4 1007 aa12.83□□□□□ -0.36
PCDHGC3-207ENST00000622656 SASH1O94885 1247 aa12.82□□□□□ -0.36
PCDHGC3-207ENST00000622656 KIAA0825Q8IV33 1275 aa12.82□□□□□ -0.36
PCDHGC3-207ENST00000622656 CDCA5Q96FF9 252 aa12.82□□□□□ -0.36
PCDHGC3-207ENST00000622656 AOX1Q06278 1338 aa12.82□□□□□ -0.36
PCDHGC3-207ENST00000622656 WNT10BO00744 389 aa12.81□□□□□ -0.36
PCDHGC3-207ENST00000622656 GYG1P46976 350 aa12.81□□□□□ -0.36
PCDHGC3-207ENST00000622656 RARSP54136 660 aaKnown RBP12.81□□□□□ -0.36
PCDHGC3-207ENST00000622656 MOB2Q70IA6 237 aa12.81□□□□□ -0.36
PCDHGC3-207ENST00000622656 ARAP2Q8WZ64 1704 aa12.8□□□□□ -0.36
PCDHGC3-207ENST00000622656 HSPA8P11142 646 aaKnown RBP12.8□□□□□ -0.36
PCDHGC3-207ENST00000622656 IL1R1P14778 569 aa12.8□□□□□ -0.36
PCDHGC3-207ENST00000622656 RFX5P48382 616 aaPredicted RBP12.8□□□□□ -0.36
PCDHGC3-207ENST00000622656 LBX1P52954 281 aa12.8□□□□□ -0.36
PCDHGC3-207ENST00000622656 HUNKP57058 714 aa12.8□□□□□ -0.36
PCDHGC3-207ENST00000622656 DIEXFQ68CQ4 756 aaKnown RBP12.8□□□□□ -0.36
PCDHGC3-207ENST00000622656 SULF1Q8IWU6 871 aa12.8□□□□□ -0.36
PCDHGC3-207ENST00000622656 ZBED3Q96IU2 234 aaPredicted RBP12.8□□□□□ -0.36
PCDHGC3-207ENST00000622656 GBA2Q9HCG7 927 aaPredicted RBP12.8□□□□□ -0.36
PCDHGC3-207ENST00000622656 TSKSQ9UJT2 592 aa12.8□□□□□ -0.36
PCDHGC3-207ENST00000622656 CASP8AP2Q9UKL3 1982 aa12.8□□□□□ -0.36
PCDHGC3-207ENST00000622656 FAM155AB1AL88 458 aaPredicted RBP12.79□□□□□ -0.36
PCDHGC3-207ENST00000622656 F8W031 263 aaPredicted RBP12.79□□□□□ -0.36
PCDHGC3-207ENST00000622656 ECE1P42892 770 aa12.79□□□□□ -0.36
PCDHGC3-207ENST00000622656 VGLL2Q8N8G2 317 aa12.79□□□□□ -0.36
PCDHGC3-207ENST00000622656 HHIPL1Q96JK4 782 aa12.79□□□□□ -0.36
PCDHGC3-207ENST00000622656 FAM84BQ96KN1 310 aaPredicted RBP12.79□□□□□ -0.36
PCDHGC3-207ENST00000622656 MYH13Q9UKX3 1938 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms