RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 PDE8BO95263 885 aa16.63■□□□□ 0.25
EPB42-210ENST00000622454 HMGB1P09429 215 aaKnown RBP16.63■□□□□ 0.25
EPB42-210ENST00000622454 HSPD1P10809 573 aaKnown RBP16.63■□□□□ 0.25
EPB42-210ENST00000622454 PARP10Q53GL7 1025 aa16.63■□□□□ 0.25
EPB42-210ENST00000622454 FAM182BQ5T319 152 aa16.63■□□□□ 0.25
EPB42-210ENST00000622454 UTP14AQ9BVJ6 771 aaKnown RBP16.63■□□□□ 0.25
EPB42-210ENST00000622454 ZNF445P59923 1031 aa16.62■□□□□ 0.25
EPB42-210ENST00000622454 SCARF1Q14162 830 aa16.62■□□□□ 0.25
EPB42-210ENST00000622454 ZSCAN23Q3MJ62 389 aa16.62■□□□□ 0.25
EPB42-210ENST00000622454 ZNF512BQ96KM6 892 aaPredicted RBP16.62■□□□□ 0.25
EPB42-210ENST00000622454 DDX60Q8IY21 1712 aaKnown RBP16.62■□□□□ 0.25
EPB42-210ENST00000622454 F13A1P00488 732 aa16.62■□□□□ 0.25
EPB42-210ENST00000622454 ZAP70P43403 619 aa16.62■□□□□ 0.25
EPB42-210ENST00000622454 PTF1AQ7RTS3 328 aa16.62■□□□□ 0.25
EPB42-210ENST00000622454 PANK2Q9BZ23 570 aa16.62■□□□□ 0.25
EPB42-210ENST00000622454 LAMB2P55268 1798 aa16.62■□□□□ 0.25
EPB42-210ENST00000622454 MROH5Q6ZUA9 1318 aa16.61■□□□□ 0.25
EPB42-210ENST00000622454 HSP90B1P14625 803 aaKnown RBP16.61■□□□□ 0.25
EPB42-210ENST00000622454 FOXD4L6Q3SYB3 417 aaPredicted RBP16.61■□□□□ 0.25
EPB42-210ENST00000622454 FOXD4L3Q6VB84 417 aaPredicted RBP16.61■□□□□ 0.25
EPB42-210ENST00000622454 OSBP2Q969R2 916 aa16.61■□□□□ 0.25
EPB42-210ENST00000622454 ARAP2Q8WZ64 1704 aa16.61■□□□□ 0.25
EPB42-210ENST00000622454 M0R2C6 588 aa16.61■□□□□ 0.25
EPB42-210ENST00000622454 BCORQ6W2J9 1755 aa16.6■□□□□ 0.25
EPB42-210ENST00000622454 HCLS1P14317 486 aaPredicted RBP16.6■□□□□ 0.25
EPB42-210ENST00000622454 PDCP20941 246 aa16.6■□□□□ 0.25
EPB42-210ENST00000622454 MCAMP43121 646 aa16.6■□□□□ 0.25
EPB42-210ENST00000622454 WASHC4Q2M389 1173 aa16.6■□□□□ 0.25
EPB42-210ENST00000622454 MTMR6Q9Y217 621 aa16.6■□□□□ 0.25
EPB42-210ENST00000622454 KCNQ4P56696 695 aa16.6■□□□□ 0.25
EPB42-210ENST00000622454 PUM3Q15397 648 aaKnown RBP16.6■□□□□ 0.25
EPB42-210ENST00000622454 PI16Q6UXB8 463 aa16.6■□□□□ 0.25
EPB42-210ENST00000622454 Q6ZUG5 572 aa16.6■□□□□ 0.25
EPB42-210ENST00000622454 STOX1Q6ZVD7 989 aa16.6■□□□□ 0.25
EPB42-210ENST00000622454 DHX32Q7L7V1 743 aaKnown RBP16.6■□□□□ 0.25
EPB42-210ENST00000622454 TMEM87AQ8NBN3 555 aa16.6■□□□□ 0.25
EPB42-210ENST00000622454 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.6■□□□□ 0.25
EPB42-210ENST00000622454 NIP7Q9Y221 180 aaKnown RBP eCLIP16.6■□□□□ 0.25
EPB42-210ENST00000622454 FAM177BA6PVY3 158 aa16.59■□□□□ 0.25
EPB42-210ENST00000622454 TTF1Q15361 905 aaPredicted RBP16.59■□□□□ 0.25
EPB42-210ENST00000622454 LARP1BQ659C4 914 aaKnown RBP16.59■□□□□ 0.25
EPB42-210ENST00000622454 USP48Q86UV5 1035 aa16.59■□□□□ 0.25
EPB42-210ENST00000622454 APPBP2Q92624 585 aa16.59■□□□□ 0.25
EPB42-210ENST00000622454 TRPC5Q9UL62 973 aaPredicted RBP16.59■□□□□ 0.25
EPB42-210ENST00000622454 NSFL1CQ9UNZ2 370 aaKnown RBP16.59■□□□□ 0.25
EPB42-210ENST00000622454 ZNF652Q9Y2D9 606 aa16.59■□□□□ 0.25
EPB42-210ENST00000622454 MYO5AQ9Y4I1 1855 aaKnown RBP16.59■□□□□ 0.25
EPB42-210ENST00000622454 LPIN2Q92539 896 aa16.58■□□□□ 0.25
EPB42-210ENST00000622454 GDPD2Q9HCC8 539 aa16.58■□□□□ 0.25
EPB42-210ENST00000622454 TMEM63CQ9P1W3 806 aa16.58■□□□□ 0.25
EPB42-210ENST00000622454 CTNNA3Q9UI47 895 aa16.58■□□□□ 0.25
EPB42-210ENST00000622454 NTSR2O95665 410 aa16.58■□□□□ 0.24
EPB42-210ENST00000622454 FGD1P98174 961 aa16.58■□□□□ 0.24
EPB42-210ENST00000622454 STK3Q13188 491 aa16.58■□□□□ 0.24
EPB42-210ENST00000622454 CCDC152Q4G0S7 254 aa16.58■□□□□ 0.24
EPB42-210ENST00000622454 ZSCAN25Q6NSZ9 544 aa16.58■□□□□ 0.24
EPB42-210ENST00000622454 MPHOSPH8Q99549 860 aa16.58■□□□□ 0.24
EPB42-210ENST00000622454 RBM27Q9P2N5 1060 aaKnown RBP16.58■□□□□ 0.24
EPB42-210ENST00000622454 VPS37CA5D8V6 355 aaPredicted RBP16.57■□□□□ 0.24
EPB42-210ENST00000622454 E7EWF7 191 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 UQCRFS1P1P0C7P4 283 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 FGFR2P21802 821 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 ARID4AP29374 1257 aaPredicted RBP16.57■□□□□ 0.24
EPB42-210ENST00000622454 CCDC102BQ68D86 513 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 CLEC4GQ6UXB4 293 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 LINC00116Q8NCU8 138 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 GTF3C6Q969F1 213 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 CNPY2Q9Y2B0 182 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 ATRNO75882 1429 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 BTAF1O14981 1849 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 DTNBO60941 627 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 BRF1Q92994 677 aa16.57■□□□□ 0.24
EPB42-210ENST00000622454 NHSQ6T4R5 1651 aa16.56■□□□□ 0.24
EPB42-210ENST00000622454 EXOSC10Q01780 885 aaKnown RBP16.56■□□□□ 0.24
EPB42-210ENST00000622454 HELBQ8NG08 1087 aaPredicted RBP16.56■□□□□ 0.24
EPB42-210ENST00000622454 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
EPB42-210ENST00000622454 PUS7LQ9H0K6 701 aaKnown RBP16.56■□□□□ 0.24
EPB42-210ENST00000622454 PHKA1P46020 1223 aa16.55■□□□□ 0.24
EPB42-210ENST00000622454 SEPT12Q8IYM1 358 aa16.55■□□□□ 0.24
EPB42-210ENST00000622454 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
EPB42-210ENST00000622454 GADD45BO75293 160 aaPredicted RBP16.55■□□□□ 0.24
EPB42-210ENST00000622454 SLC5A1P13866 664 aa16.55■□□□□ 0.24
EPB42-210ENST00000622454 IMMTQ16891 758 aaKnown RBP16.55■□□□□ 0.24
EPB42-210ENST00000622454 CSPP1Q1MSJ5 1256 aa16.55■□□□□ 0.24
EPB42-210ENST00000622454 LRRC2Q9BYS8 371 aa16.55■□□□□ 0.24
EPB42-210ENST00000622454 AGXT2Q9BYV1 514 aa16.55■□□□□ 0.24
EPB42-210ENST00000622454 QTRT2Q9H974 415 aaKnown RBP16.55■□□□□ 0.24
EPB42-210ENST00000622454 A0A0G2JLW4 131 aa16.54■□□□□ 0.24
EPB42-210ENST00000622454 FOXP2O15409 715 aa16.54■□□□□ 0.24
EPB42-210ENST00000622454 ADD2P35612 726 aa16.54■□□□□ 0.24
EPB42-210ENST00000622454 IGHMBP2P38935 993 aaKnown RBP16.54■□□□□ 0.24
EPB42-210ENST00000622454 SLC9C2Q5TAH2 1124 aa16.54■□□□□ 0.24
EPB42-210ENST00000622454 TTLL5Q6EMB2 1281 aa16.54■□□□□ 0.24
EPB42-210ENST00000622454 GPAA1O43292 621 aa16.54■□□□□ 0.24
EPB42-210ENST00000622454 ONECUT3O60422 494 aaPredicted RBP16.54■□□□□ 0.24
EPB42-210ENST00000622454 FGAP02671 866 aa16.54■□□□□ 0.24
EPB42-210ENST00000622454 PFKFB2O60825 505 aa16.53■□□□□ 0.24
EPB42-210ENST00000622454 NASPP49321 788 aaPredicted RBP16.53■□□□□ 0.24
EPB42-210ENST00000622454 UBE3CQ15386 1083 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms