RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 ITGA6P23229 1130 aa11.91□□□□□ -0.5
TARDBP-227ENST00000622057 DGKZQ13574 1117 aa11.91□□□□□ -0.5
TARDBP-227ENST00000622057 GCKRQ14397 625 aa11.91□□□□□ -0.5
TARDBP-227ENST00000622057 PRAMEF18Q5VWM3 479 aa11.91□□□□□ -0.5
TARDBP-227ENST00000622057 DNAAF4Q8WXU2 420 aa11.91□□□□□ -0.5
TARDBP-227ENST00000622057 GMLQ99445 158 aa11.91□□□□□ -0.5
TARDBP-227ENST00000622057 MCOLN1Q9GZU1 580 aa11.91□□□□□ -0.5
TARDBP-227ENST00000622057 LEMD3Q9Y2U8 911 aa11.91□□□□□ -0.5
TARDBP-227ENST00000622057 IL16Q14005 1332 aa11.9□□□□□ -0.5
TARDBP-227ENST00000622057 ANP32CO43423 234 aa11.9□□□□□ -0.5
TARDBP-227ENST00000622057 VAMP4O75379 141 aa11.9□□□□□ -0.5
TARDBP-227ENST00000622057 TRPA1O75762 1119 aa11.9□□□□□ -0.5
TARDBP-227ENST00000622057 NBPF9Q3BBW0 867 aa11.9□□□□□ -0.5
TARDBP-227ENST00000622057 TXNRD3Q86VQ6 643 aa11.9□□□□□ -0.5
TARDBP-227ENST00000622057 OGFOD1Q8N543 542 aa11.9□□□□□ -0.5
TARDBP-227ENST00000622057 COA1Q9GZY4 146 aa11.9□□□□□ -0.5
TARDBP-227ENST00000622057 MYH16Q9H6N6 1097 aa11.9□□□□□ -0.5
TARDBP-227ENST00000622057 MED23Q9ULK4 1368 aa11.9□□□□□ -0.5
TARDBP-227ENST00000622057 ZNF804BA4D1E1 1349 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 CSF1RP07333 972 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 SLC10A3P09131 477 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 KCNJ4P48050 445 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 EXOSC9Q06265 439 aaKnown RBP11.89□□□□□ -0.51
TARDBP-227ENST00000622057 TTLL12Q14166 644 aaPredicted RBP11.89□□□□□ -0.51
TARDBP-227ENST00000622057 FAM161AQ3B820 660 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 DACT2Q5SW24 774 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 STRIP1Q5VSL9 837 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 TTLL5Q6EMB2 1281 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 MOB2Q70IA6 237 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 LINS1Q8NG48 757 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 CSRNP1Q96S65 589 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 PLA2G12BQ9BX93 195 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 ANKRD2Q9GZV1 360 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 RNF186Q9NXI6 227 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 THSD7BQ9C0I4 1608 aa11.89□□□□□ -0.51
TARDBP-227ENST00000622057 FANCIQ9NVI1 1328 aa11.88□□□□□ -0.51
TARDBP-227ENST00000622057 ANKRD18BA2A2Z9 1011 aa11.88□□□□□ -0.51
TARDBP-227ENST00000622057 UBE2Q2LH0YL09 131 aa11.88□□□□□ -0.51
TARDBP-227ENST00000622057 KLRK1P26718 216 aa11.88□□□□□ -0.51
TARDBP-227ENST00000622057 CASP7P55210 303 aa11.88□□□□□ -0.51
TARDBP-227ENST00000622057 GTF2IP78347 998 aa11.88□□□□□ -0.51
TARDBP-227ENST00000622057 CHRNDQ07001 517 aa11.88□□□□□ -0.51
TARDBP-227ENST00000622057 NCBP3Q53F19 620 aaKnown RBP11.88□□□□□ -0.51
TARDBP-227ENST00000622057 WDR63Q8IWG1 891 aa11.88□□□□□ -0.51
TARDBP-227ENST00000622057 CHMP3Q9Y3E7 222 aa11.88□□□□□ -0.51
TARDBP-227ENST00000622057 SCN9AQ15858 1988 aa11.88□□□□□ -0.51
TARDBP-227ENST00000622057 MYO3BQ8WXR4 1341 aa11.87□□□□□ -0.51
TARDBP-227ENST00000622057 PITPNM2Q9BZ72 1349 aa11.87□□□□□ -0.51
TARDBP-227ENST00000622057 POLR2AP24928 1970 aaKnown RBP11.87□□□□□ -0.51
TARDBP-227ENST00000622057 F6X3S4 739 aa11.87□□□□□ -0.51
TARDBP-227ENST00000622057 SNAP23O00161 211 aa11.87□□□□□ -0.51
TARDBP-227ENST00000622057 WNT10BO00744 389 aa11.87□□□□□ -0.51
TARDBP-227ENST00000622057 TAF5LO75529 589 aa11.87□□□□□ -0.51
TARDBP-227ENST00000622057 FKBP1BP68106 108 aa11.87□□□□□ -0.51
TARDBP-227ENST00000622057 RASAL3Q86YV0 1011 aa11.87□□□□□ -0.51
TARDBP-227ENST00000622057 KIAA0825Q8IV33 1275 aa11.87□□□□□ -0.51
TARDBP-227ENST00000622057 HELBQ8NG08 1087 aaPredicted RBP11.87□□□□□ -0.51
TARDBP-227ENST00000622057 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
TARDBP-227ENST00000622057 SASH1O94885 1247 aa11.86□□□□□ -0.51
TARDBP-227ENST00000622057 MLLT1Q03111 559 aaPredicted RBP11.86□□□□□ -0.51
TARDBP-227ENST00000622057 IFIT5Q13325 482 aaKnown RBP11.86□□□□□ -0.51
TARDBP-227ENST00000622057 PRKG1Q13976 671 aa11.86□□□□□ -0.51
TARDBP-227ENST00000622057 FAM9BQ8IZU0 186 aa11.86□□□□□ -0.51
TARDBP-227ENST00000622057 CD209Q9NNX6 404 aa11.86□□□□□ -0.51
TARDBP-227ENST00000622057 SAGE1Q9NXZ1 904 aa11.86□□□□□ -0.51
TARDBP-227ENST00000622057 ZNF609O15014 1411 aa11.86□□□□□ -0.51
TARDBP-227ENST00000622057 PLIN1O60240 522 aa11.85□□□□□ -0.51
TARDBP-227ENST00000622057 NF2P35240 595 aa11.85□□□□□ -0.51
TARDBP-227ENST00000622057 BEND3Q5T5X7 828 aa11.85□□□□□ -0.51
TARDBP-227ENST00000622057 REM2Q8IYK8 340 aaPredicted RBP11.85□□□□□ -0.51
TARDBP-227ENST00000622057 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
TARDBP-227ENST00000622057 ZNF316A6NFI3 1004 aaPredicted RBP11.84□□□□□ -0.51
TARDBP-227ENST00000622057 RGS19P49795 217 aa11.84□□□□□ -0.51
TARDBP-227ENST00000622057 MMP14P50281 582 aa11.84□□□□□ -0.51
TARDBP-227ENST00000622057 FOXO4P98177 505 aa11.84□□□□□ -0.51
TARDBP-227ENST00000622057 MKRN3Q13064 507 aaKnown RBP11.84□□□□□ -0.51
TARDBP-227ENST00000622057 CCDC57Q2TAC2 916 aa11.84□□□□□ -0.51
TARDBP-227ENST00000622057 TAF7LQ5H9L4 462 aa11.84□□□□□ -0.51
TARDBP-227ENST00000622057 LMBR1LQ6UX01 489 aa11.84□□□□□ -0.51
TARDBP-227ENST00000622057 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.84□□□□□ -0.51
TARDBP-227ENST00000622057 CASP8AP2Q9UKL3 1982 aa11.84□□□□□ -0.51
TARDBP-227ENST00000622057 F8W031 263 aaPredicted RBP11.83□□□□□ -0.52
TARDBP-227ENST00000622057 TBC1D8O95759 1140 aa11.83□□□□□ -0.52
TARDBP-227ENST00000622057 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
TARDBP-227ENST00000622057 DLGAP5Q15398 846 aa11.83□□□□□ -0.52
TARDBP-227ENST00000622057 EPHA10Q5JZY3 1008 aa11.83□□□□□ -0.52
TARDBP-227ENST00000622057 SLC4A10Q6U841 1118 aa11.83□□□□□ -0.52
TARDBP-227ENST00000622057 LDHAL6AQ6ZMR3 332 aa11.83□□□□□ -0.52
TARDBP-227ENST00000622057 ZNF594Q96JF6 807 aaPredicted RBP11.83□□□□□ -0.52
TARDBP-227ENST00000622057 CNNM1Q9NRU3 951 aa11.83□□□□□ -0.52
TARDBP-227ENST00000622057 C9orf78Q9NZ63 289 aaPredicted RBP11.83□□□□□ -0.52
TARDBP-227ENST00000622057 JAG2Q9Y219 1238 aa11.83□□□□□ -0.52
TARDBP-227ENST00000622057 GRM8O00222 908 aa11.82□□□□□ -0.52
TARDBP-227ENST00000622057 ARMC9Q7Z3E5 817 aa11.82□□□□□ -0.52
TARDBP-227ENST00000622057 ZNF804AQ7Z570 1209 aa11.82□□□□□ -0.52
TARDBP-227ENST00000622057 APOBEC3FQ8IUX4 373 aaKnown RBP11.82□□□□□ -0.52
TARDBP-227ENST00000622057 ANGEL1Q9UNK9 670 aaKnown RBP11.82□□□□□ -0.52
TARDBP-227ENST00000622057 FZD1Q9UP38 647 aa11.82□□□□□ -0.52
TARDBP-227ENST00000622057 PTPN12Q05209 780 aaKnown RBP11.81□□□□□ -0.52
TARDBP-227ENST00000622057 CERS5Q8N5B7 392 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms