RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 MAFAQ8NHW3 353 aaPredicted RBP3.21□□□□□ -1.9
CPNE3-211ENST00000621526 GAS2L2Q8NHY3 880 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 TBC1D16Q8TBP0 767 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 PXYLP1Q8TE99 480 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 UBE2OQ9C0C9 1292 aaKnown RBP3.21□□□□□ -1.9
CPNE3-211ENST00000621526 DEFB129Q9H1M3 183 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 DBNDD1Q9H9R9 158 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 RAPGEFL1Q9UHV5 662 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 RIPOR2Q9Y4F9 1068 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 PPP2R3BQ9Y5P8 575 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 TRPM7Q96QT4 1865 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 RTL9Q8NET4 1388 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 AFDNP55196 1824 aaKnown RBP3.21□□□□□ -1.9
CPNE3-211ENST00000621526 CENPFP49454 3210 aa3.21□□□□□ -1.9
CPNE3-211ENST00000621526 IRS2Q9Y4H2 1338 aa3.2□□□□□ -1.9
CPNE3-211ENST00000621526 TMEM265A0A087WTH1 108 aa3.2□□□□□ -1.9
CPNE3-211ENST00000621526 KCNQ3O43525 872 aa3.2□□□□□ -1.9
CPNE3-211ENST00000621526 HTATSF1O43719 755 aaKnown RBP3.2□□□□□ -1.9
CPNE3-211ENST00000621526 MYCP01106 439 aaPredicted RBP3.2□□□□□ -1.9
CPNE3-211ENST00000621526 MAGEA10P43363 369 aaPredicted RBP3.2□□□□□ -1.9
CPNE3-211ENST00000621526 PSMC4P43686 418 aa3.2□□□□□ -1.9
CPNE3-211ENST00000621526 IREB2P48200 963 aaKnown RBP3.2□□□□□ -1.9
CPNE3-211ENST00000621526 TAF1CQ15572 869 aaPredicted RBP3.2□□□□□ -1.9
CPNE3-211ENST00000621526 ZNF697Q5TEC3 545 aa3.2□□□□□ -1.9
CPNE3-211ENST00000621526 STRIP1Q5VSL9 837 aa3.2□□□□□ -1.9
CPNE3-211ENST00000621526 KIF6Q6ZMV9 814 aa3.2□□□□□ -1.9
CPNE3-211ENST00000621526 SLAIN1Q8ND83 568 aa3.2□□□□□ -1.9
CPNE3-211ENST00000621526 RAET1EQ8TD07 263 aa3.2□□□□□ -1.9
CPNE3-211ENST00000621526 ZBED3Q96IU2 234 aaPredicted RBP3.2□□□□□ -1.9
CPNE3-211ENST00000621526 PAWRQ96IZ0 340 aaKnown RBP3.2□□□□□ -1.9
CPNE3-211ENST00000621526 ASB2Q96Q27 587 aa3.2□□□□□ -1.9
CPNE3-211ENST00000621526 NBPF3Q9H094 633 aa3.2□□□□□ -1.9
CPNE3-211ENST00000621526 HCN4Q9Y3Q4 1203 aa3.2□□□□□ -1.9
CPNE3-211ENST00000621526 UBN2Q6ZU65 1347 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 MYO3BQ8WXR4 1341 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 MUC3AQ02505 3323 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 GPR37L1O60883 481 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 FMNL1O95466 1100 aaPredicted RBP3.19□□□□□ -1.9
CPNE3-211ENST00000621526 CETPP11597 493 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 OSBPP22059 807 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 GPTP24298 496 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 GJA5P36382 358 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 PIP4K2AP48426 406 aaPredicted RBP3.19□□□□□ -1.9
CPNE3-211ENST00000621526 MAP3K9P80192 1104 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 GPSM2P81274 684 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 SMAD3P84022 425 aaKnown RBP3.19□□□□□ -1.9
CPNE3-211ENST00000621526 IRF5Q13568 498 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 PRKG1Q13976 671 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 TAF7Q15545 349 aaPredicted RBP3.19□□□□□ -1.9
CPNE3-211ENST00000621526 HSP90AB3PQ58FF7 597 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 SLC51AQ86UW1 340 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 ALYREFQ86V81 257 aaKnown RBP3.19□□□□□ -1.9
CPNE3-211ENST00000621526 MORC1Q86VD1 984 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 BRI3BPQ8WY22 251 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 CLMNQ96JQ2 1002 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 PAK6Q9NQU5 681 aaPredicted RBP3.19□□□□□ -1.9
CPNE3-211ENST00000621526 BIN2Q9UBW5 565 aaPredicted RBP3.19□□□□□ -1.9
CPNE3-211ENST00000621526 CEMIPQ8WUJ3 1361 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 ABCC12Q96J65 1359 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 RGPD2P0DJD1 1756 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 SH3TC1Q8TE82 1336 aa3.19□□□□□ -1.9
CPNE3-211ENST00000621526 ANKRD31Q8N7Z5 1873 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 CACNA1AO00555 2505 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 CCL15-CCL14A0A0B4J2E2 113 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 DIAPH1O60610 1272 aaKnown RBP3.18□□□□□ -1.9
CPNE3-211ENST00000621526 HMOX1P09601 288 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 HCLS1P14317 486 aaPredicted RBP3.18□□□□□ -1.9
CPNE3-211ENST00000621526 HSP90B1P14625 803 aaKnown RBP3.18□□□□□ -1.9
CPNE3-211ENST00000621526 ATP2B4P23634 1241 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 MRPS5P82675 430 aaKnown RBP3.18□□□□□ -1.9
CPNE3-211ENST00000621526 CCL15Q16663 113 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 DACT2Q5SW24 774 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 TTLL7Q6ZT98 887 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 NLRP10Q86W26 655 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 FAM43AQ8N2R8 423 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 NGEFQ8N5V2 710 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 PNISRQ8TF01 805 aaKnown RBP3.18□□□□□ -1.9
CPNE3-211ENST00000621526 CELF1Q92879 486 aaKnown RBP3.18□□□□□ -1.9
CPNE3-211ENST00000621526 OPTNQ96CV9 577 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 DEFB118Q96PH6 123 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 LRFN3Q9BTN0 628 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 ARHGAP39Q9C0H5 1083 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 UNC93B1Q9H1C4 597 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 KCNH6Q9H252 994 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 TRMT112Q9UI30 125 aaKnown RBP3.18□□□□□ -1.9
CPNE3-211ENST00000621526 GGA1Q9UJY5 639 aa3.18□□□□□ -1.9
CPNE3-211ENST00000621526 ZMYND8Q9ULU4 1186 aaPredicted RBP3.18□□□□□ -1.9
CPNE3-211ENST00000621526 SCAF8Q9UPN6 1271 aaKnown RBP3.18□□□□□ -1.9
CPNE3-211ENST00000621526 RRP7AQ9Y3A4 280 aaKnown RBP3.18□□□□□ -1.9
CPNE3-211ENST00000621526 AKAP11Q9UKA4 1901 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 TJP1Q07157 1748 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 BTBD19C9JJ37 291 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 MYO1BO43795 1136 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 ADCY3O60266 1144 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 BMP1P13497 986 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 FOSL2P15408 326 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 CTGFP29279 349 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 FCGRTP55899 365 aa3.17□□□□□ -1.9
CPNE3-211ENST00000621526 TRIM28Q13263 835 aaKnown RBP3.17□□□□□ -1.9
CPNE3-211ENST00000621526 SNAPC2Q13487 334 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms