RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 XDHP47989 1333 aa14.68□□□□□ -0.06
CPNE3-210ENST00000621245 ZNF609O15014 1411 aa14.68□□□□□ -0.06
CPNE3-210ENST00000621245 H7C1W4 665 aa14.68□□□□□ -0.06
CPNE3-210ENST00000621245 VIL1P09327 827 aaKnown RBP14.68□□□□□ -0.06
CPNE3-210ENST00000621245 KLRK1P26718 216 aa14.68□□□□□ -0.06
CPNE3-210ENST00000621245 CACNB1Q02641 598 aaPredicted RBP14.68□□□□□ -0.06
CPNE3-210ENST00000621245 FAM161AQ3B820 660 aa14.68□□□□□ -0.06
CPNE3-210ENST00000621245 ZC3H15Q8WU90 426 aaKnown RBP14.68□□□□□ -0.06
CPNE3-210ENST00000621245 ZC3H12CQ9C0D7 883 aaKnown RBP14.68□□□□□ -0.06
CPNE3-210ENST00000621245 PRDM10Q9NQV6 1147 aa14.68□□□□□ -0.06
CPNE3-210ENST00000621245 VAMP4O75379 141 aa14.67□□□□□ -0.06
CPNE3-210ENST00000621245 TXNRD3Q86VQ6 643 aa14.67□□□□□ -0.06
CPNE3-210ENST00000621245 MINPP1Q9UNW1 487 aa14.67□□□□□ -0.06
CPNE3-210ENST00000621245 SCAF8Q9UPN6 1271 aaKnown RBP14.67□□□□□ -0.06
CPNE3-210ENST00000621245 F6X3S4 739 aa14.66□□□□□ -0.06
CPNE3-210ENST00000621245 ANP32CO43423 234 aa14.66□□□□□ -0.06
CPNE3-210ENST00000621245 RPS12P25398 132 aaKnown RBP14.66□□□□□ -0.06
CPNE3-210ENST00000621245 GCKRQ14397 625 aa14.66□□□□□ -0.06
CPNE3-210ENST00000621245 KIF4BQ2VIQ3 1234 aa14.66□□□□□ -0.06
CPNE3-210ENST00000621245 RSBN1LQ6PCB5 846 aaPredicted RBP14.66□□□□□ -0.06
CPNE3-210ENST00000621245 CDC37L1Q7L3B6 337 aa14.66□□□□□ -0.06
CPNE3-210ENST00000621245 GMLQ99445 158 aa14.66□□□□□ -0.06
CPNE3-210ENST00000621245 GGA3Q9NZ52 723 aa14.66□□□□□ -0.06
CPNE3-210ENST00000621245 AKAP11Q9UKA4 1901 aa14.65□□□□□ -0.06
CPNE3-210ENST00000621245 MED23Q9ULK4 1368 aa14.65□□□□□ -0.06
CPNE3-210ENST00000621245 ECM29Q5VYK3 1845 aa14.65□□□□□ -0.06
CPNE3-210ENST00000621245 SNAP23O00161 211 aa14.65□□□□□ -0.06
CPNE3-210ENST00000621245 NEXNQ0ZGT2 675 aa14.65□□□□□ -0.06
CPNE3-210ENST00000621245 FKBP5Q13451 457 aaPredicted RBP14.65□□□□□ -0.06
CPNE3-210ENST00000621245 KRT26Q7Z3Y9 468 aa14.65□□□□□ -0.06
CPNE3-210ENST00000621245 DNAAF4Q8WXU2 420 aa14.65□□□□□ -0.06
CPNE3-210ENST00000621245 CDC5LQ99459 802 aaKnown RBP14.65□□□□□ -0.06
CPNE3-210ENST00000621245 TNRC18O15417 2968 aaPredicted RBP14.65□□□□□ -0.06
CPNE3-210ENST00000621245 HSP90B1P14625 803 aaKnown RBP14.64□□□□□ -0.07
CPNE3-210ENST00000621245 ATP2B4P23634 1241 aa14.64□□□□□ -0.07
CPNE3-210ENST00000621245 ECE1P42892 770 aa14.64□□□□□ -0.07
CPNE3-210ENST00000621245 ZNF280AP59817 542 aaPredicted RBP14.64□□□□□ -0.07
CPNE3-210ENST00000621245 MAP2K1Q02750 393 aaPredicted RBP14.64□□□□□ -0.07
CPNE3-210ENST00000621245 WDR63Q8IWG1 891 aa14.64□□□□□ -0.07
CPNE3-210ENST00000621245 BSDC1Q9NW68 430 aaPredicted RBP14.64□□□□□ -0.07
CPNE3-210ENST00000621245 G3V3G9 751 aa14.63□□□□□ -0.07
CPNE3-210ENST00000621245 ITGA6P23229 1130 aa14.63□□□□□ -0.07
CPNE3-210ENST00000621245 CCT4P50991 539 aaKnown RBP14.63□□□□□ -0.07
CPNE3-210ENST00000621245 HUNKP57058 714 aa14.63□□□□□ -0.07
CPNE3-210ENST00000621245 EPHA10Q5JZY3 1008 aa14.63□□□□□ -0.07
CPNE3-210ENST00000621245 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
CPNE3-210ENST00000621245 FAM9BQ8IZU0 186 aa14.63□□□□□ -0.07
CPNE3-210ENST00000621245 RNF25Q96BH1 459 aaPredicted RBP14.63□□□□□ -0.07
CPNE3-210ENST00000621245 PLA2G12BQ9BX93 195 aa14.63□□□□□ -0.07
CPNE3-210ENST00000621245 IRS2Q9Y4H2 1338 aa14.63□□□□□ -0.07
CPNE3-210ENST00000621245 PAPPA2Q9BXP8 1791 aa14.62□□□□□ -0.07
CPNE3-210ENST00000621245 FAM155AB1AL88 458 aaPredicted RBP14.62□□□□□ -0.07
CPNE3-210ENST00000621245 CSF1RP07333 972 aa14.62□□□□□ -0.07
CPNE3-210ENST00000621245 ZEB1P37275 1124 aaPredicted RBP14.62□□□□□ -0.07
CPNE3-210ENST00000621245 FOXO4P98177 505 aa14.62□□□□□ -0.07
CPNE3-210ENST00000621245 SCARF1Q14162 830 aa14.62□□□□□ -0.07
CPNE3-210ENST00000621245 DACT2Q5SW24 774 aa14.62□□□□□ -0.07
CPNE3-210ENST00000621245 ANGEL2Q5VTE6 544 aaKnown RBP14.62□□□□□ -0.07
CPNE3-210ENST00000621245 HS6ST3Q8IZP7 471 aa14.62□□□□□ -0.07
CPNE3-210ENST00000621245 LINS1Q8NG48 757 aa14.62□□□□□ -0.07
CPNE3-210ENST00000621245 ARAP2Q8WZ64 1704 aa14.61□□□□□ -0.07
CPNE3-210ENST00000621245 USP17L3A6NCW0 530 aa14.61□□□□□ -0.07
CPNE3-210ENST00000621245 USP17L4A6NCW7 530 aa14.61□□□□□ -0.07
CPNE3-210ENST00000621245 NUBP1P53384 320 aa14.61□□□□□ -0.07
CPNE3-210ENST00000621245 BEND3Q5T5X7 828 aa14.61□□□□□ -0.07
CPNE3-210ENST00000621245 USP17L1Q7RTZ2 530 aa14.61□□□□□ -0.07
CPNE3-210ENST00000621245 DCPSQ96C86 337 aaKnown RBP14.61□□□□□ -0.07
CPNE3-210ENST00000621245 CDCA5Q96FF9 252 aa14.61□□□□□ -0.07
CPNE3-210ENST00000621245 HHIPL1Q96JK4 782 aa14.61□□□□□ -0.07
CPNE3-210ENST00000621245 CHMP4AQ9BY43 222 aa14.61□□□□□ -0.07
CPNE3-210ENST00000621245 GBA2Q9HCG7 927 aaPredicted RBP14.61□□□□□ -0.07
CPNE3-210ENST00000621245 MYOZ2Q9NPC6 264 aa14.61□□□□□ -0.07
CPNE3-210ENST00000621245 MAP2K2P36507 400 aa14.6□□□□□ -0.07
CPNE3-210ENST00000621245 GSE1Q14687 1217 aa14.6□□□□□ -0.07
CPNE3-210ENST00000621245 NBPF9Q3BBW0 867 aa14.6□□□□□ -0.07
CPNE3-210ENST00000621245 MOB2Q70IA6 237 aa14.6□□□□□ -0.07
CPNE3-210ENST00000621245 AGBL3Q8NEM8 1001 aa14.6□□□□□ -0.07
CPNE3-210ENST00000621245 HELBQ8NG08 1087 aaPredicted RBP14.6□□□□□ -0.07
CPNE3-210ENST00000621245 FBXW7Q969H0 707 aa14.6□□□□□ -0.07
CPNE3-210ENST00000621245 ZNF521Q96K83 1311 aa14.6□□□□□ -0.07
CPNE3-210ENST00000621245 HTTP42858 3142 aa14.59□□□□□ -0.07
CPNE3-210ENST00000621245 CENPFP49454 3210 aa14.59□□□□□ -0.07
CPNE3-210ENST00000621245 TAF5LO75529 589 aa14.59□□□□□ -0.07
CPNE3-210ENST00000621245 USP17L8P0C7I0 530 aa14.59□□□□□ -0.07
CPNE3-210ENST00000621245 IGHMBP2P38935 993 aaKnown RBP14.59□□□□□ -0.07
CPNE3-210ENST00000621245 CHRNDQ07001 517 aa14.59□□□□□ -0.07
CPNE3-210ENST00000621245 PRAMEF18Q5VWM3 479 aa14.59□□□□□ -0.07
CPNE3-210ENST00000621245 PODNQ7Z5L7 613 aa14.59□□□□□ -0.07
CPNE3-210ENST00000621245 ZNF594Q96JF6 807 aaPredicted RBP14.59□□□□□ -0.07
CPNE3-210ENST00000621245 MYH16Q9H6N6 1097 aa14.59□□□□□ -0.07
CPNE3-210ENST00000621245 ZNF804BA4D1E1 1349 aa14.59□□□□□ -0.07
CPNE3-210ENST00000621245 SASH1O94885 1247 aa14.58□□□□□ -0.08
CPNE3-210ENST00000621245 BRPF1P55201 1214 aaPredicted RBP14.58□□□□□ -0.08
CPNE3-210ENST00000621245 SULF1Q8IWU6 871 aa14.58□□□□□ -0.08
CPNE3-210ENST00000621245 OTOFQ9HC10 1997 aa14.57□□□□□ -0.08
CPNE3-210ENST00000621245 RGMBQ6NW40 437 aa14.57□□□□□ -0.08
CPNE3-210ENST00000621245 CERS5Q8N5B7 392 aa14.57□□□□□ -0.08
CPNE3-210ENST00000621245 ABHD8Q96I13 439 aa14.57□□□□□ -0.08
CPNE3-210ENST00000621245 LEMD3Q9Y2U8 911 aa14.57□□□□□ -0.08
CPNE3-210ENST00000621245 CHMP3Q9Y3E7 222 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms