RNA–Protein interactions for RNA: ENST00000620535.4

NOP2-223, Transcript of NOP2 nucleolar protein, human

TSL 1 (best) BASIC

Gene NOP2, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP2-223	ENST00000620535	KIF1A	Q12756	1690 aa		13.57	□□□□□ -0.24
NOP2-223	ENST00000620535	EXOSC10	Q01780	885 aa	Known RBP	13.56	□□□□□ -0.24
NOP2-223	ENST00000620535	GORAB	Q5T7V8	394 aa		13.56	□□□□□ -0.24
NOP2-223	ENST00000620535	CCAR1	Q8IX12	1150 aa	Known RBP	13.56	□□□□□ -0.24
NOP2-223	ENST00000620535	HELLS	Q9NRZ9	838 aa		13.56	□□□□□ -0.24
NOP2-223	ENST00000620535	GJB4	Q9NTQ9	266 aa		13.56	□□□□□ -0.24
NOP2-223	ENST00000620535	SPTLC3	Q9NUV7	552 aa		13.56	□□□□□ -0.24
NOP2-223	ENST00000620535	LMTK3	Q96Q04	1460 aa		13.56	□□□□□ -0.24
NOP2-223	ENST00000620535	RNF113A	O15541	343 aa	Known RBP	13.56	□□□□□ -0.24
NOP2-223	ENST00000620535	CFAP45	Q9UL16	551 aa		13.56	□□□□□ -0.24
NOP2-223	ENST00000620535	SPATA31A3	Q5VYP0	1347 aa		13.56	□□□□□ -0.24
NOP2-223	ENST00000620535	PDIA3	P30101	505 aa	Known RBP	13.55	□□□□□ -0.24
NOP2-223	ENST00000620535	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.55	□□□□□ -0.24
NOP2-223	ENST00000620535	PALLD	Q8WX93	1383 aa		13.55	□□□□□ -0.24
NOP2-223	ENST00000620535	ADAMTSL3	P82987	1691 aa		13.55	□□□□□ -0.24
NOP2-223	ENST00000620535	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.55	□□□□□ -0.24
NOP2-223	ENST00000620535	DSCC1	Q9BVC3	393 aa		13.55	□□□□□ -0.24
NOP2-223	ENST00000620535	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.55	□□□□□ -0.24
NOP2-223	ENST00000620535	CEP126	Q9P2H0	1117 aa		13.55	□□□□□ -0.24
NOP2-223	ENST00000620535	KAT6B	Q8WYB5	2073 aa		13.55	□□□□□ -0.24
NOP2-223	ENST00000620535	TNS3	Q68CZ2	1445 aa		13.55	□□□□□ -0.24
NOP2-223	ENST00000620535	HMGB1	P09429	215 aa	Known RBP	13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	CCDC57	Q2TAC2	916 aa		13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	RBM43	Q6ZSC3	357 aa	Known RBP	13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	ILDR1	Q86SU0	546 aa	Predicted RBP	13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	GLI3	P10071	1580 aa		13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	GOLGA6L6	A8MZA4	724 aa		13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	ME1	P48163	572 aa		13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	CCDC191	Q8NCU4	936 aa		13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	XAGE2	Q96GT9	111 aa		13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	FOXP2	O15409	715 aa		13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	ZNF75D	P51815	510 aa		13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	HSPA2	P54652	639 aa		13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	TTC39A	Q5SRH9	613 aa		13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	RFX7	Q2KHR2	1363 aa		13.54	□□□□□ -0.24
NOP2-223	ENST00000620535	PCDH11X	Q9BZA7	1347 aa		13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	PCDH11Y	Q9BZA8	1340 aa		13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	POLR3D	P05423	398 aa	Predicted RBP	13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	FDPS	P14324	419 aa	Known RBP	13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	LLPH	Q9BRT6	129 aa	Known RBP	13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	PUS7L	Q9H0K6	701 aa	Known RBP	13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	PODXL2	Q9NZ53	605 aa		13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	DENND2A	Q9ULE3	1009 aa		13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	GPT	P24298	496 aa		13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	ZAP70	P43403	619 aa		13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	ARID5B	Q14865	1188 aa		13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	CCDC144B	Q3MJ40	725 aa		13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	CADPS2	Q86UW7	1296 aa		13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	CCDC144CP	Q8IYA2	1237 aa		13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	ZNF710	Q8N1W2	664 aa		13.53	□□□□□ -0.24
NOP2-223	ENST00000620535	FGA	P02671	866 aa		13.52	□□□□□ -0.24
NOP2-223	ENST00000620535	SNW1	Q13573	536 aa	Known RBP	13.52	□□□□□ -0.24
NOP2-223	ENST00000620535	TAF7L	Q5H9L4	462 aa		13.52	□□□□□ -0.24
NOP2-223	ENST00000620535	NAA16	Q6N069	864 aa	Predicted RBP	13.52	□□□□□ -0.24
NOP2-223	ENST00000620535	PRIMPOL	Q96LW4	560 aa		13.52	□□□□□ -0.24
NOP2-223	ENST00000620535	RCOR1	Q9UKL0	485 aa		13.52	□□□□□ -0.24
NOP2-223	ENST00000620535	CCDC158	Q5M9N0	1113 aa		13.52	□□□□□ -0.25
NOP2-223	ENST00000620535	PLA2G4D	Q86XP0	818 aa		13.52	□□□□□ -0.25
NOP2-223	ENST00000620535	TDRD7	Q8NHU6	1098 aa	Known RBP	13.52	□□□□□ -0.25
NOP2-223	ENST00000620535	C16orf45	Q96MC5	204 aa	Predicted RBP	13.52	□□□□□ -0.25
NOP2-223	ENST00000620535	GPR108	Q9NPR9	543 aa		13.52	□□□□□ -0.25
NOP2-223	ENST00000620535	CLIP2	Q9UDT6	1046 aa		13.52	□□□□□ -0.25
NOP2-223	ENST00000620535	WDR17	Q8IZU2	1322 aa		13.52	□□□□□ -0.25
NOP2-223	ENST00000620535		A0A1B0GVL5	298 aa		13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	RIOK3	O14730	519 aa	Known RBP	13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	HMGN5	P82970	282 aa	Known RBP	13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	FSIP1	Q8NA03	581 aa		13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	NKX2-3	Q8TAU0	364 aa		13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	AGXT2	Q9BYV1	514 aa		13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	ASAP1	Q9ULH1	1129 aa		13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	STRCP1	A6NGW2	1772 aa		13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	CARMIL3	Q8ND23	1372 aa		13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	PKD1L3	Q7Z443	1732 aa		13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	ZSCAN25	Q6NSZ9	544 aa		13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	CCDC73	Q6ZRK6	1079 aa		13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	CACTIN	Q8WUQ7	758 aa	Known RBP	13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	ZMYND15	Q9H091	742 aa		13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	SALL1	Q9NSC2	1324 aa		13.51	□□□□□ -0.25
NOP2-223	ENST00000620535	ERVV-2	B6SEH9	535 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	GOLGA6L19	H0YKK7	550 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	IQCB1	Q15051	598 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	DNAJC10	Q8IXB1	793 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	KIF3A	Q9Y496	699 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	TJP1	Q07157	1748 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	KLF18	A0A0U1RQI7	1052 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	PRC1	O43663	620 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	KIN	O60870	393 aa	Known RBP	13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	IL2RB	P14784	551 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	RXRA	P19793	462 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	TCIRG1	Q13488	830 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	BRINP3	Q76B58	766 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	PCDHA7	Q9UN72	937 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	CLIC4	Q9Y696	253 aa		13.5	□□□□□ -0.25
NOP2-223	ENST00000620535	CIAO1	O76071	339 aa		13.49	□□□□□ -0.25
NOP2-223	ENST00000620535	TPM3	P06753	285 aa		13.49	□□□□□ -0.25
NOP2-223	ENST00000620535	ZNF274	Q96GC6	653 aa	Predicted RBP	13.49	□□□□□ -0.25
NOP2-223	ENST00000620535	LAMB4	A4D0S4	1761 aa		13.49	□□□□□ -0.25
NOP2-223	ENST00000620535	GOLGA8B	A8MQT2	603 aa		13.49	□□□□□ -0.25
NOP2-223	ENST00000620535	HLF	Q16534	295 aa		13.49	□□□□□ -0.25
NOP2-223	ENST00000620535	IMMT	Q16891	758 aa	Known RBP	13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms