RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 SP8Q8IXZ3 490 aa8.78□□□□□ -1
PSMB3-212ENST00000620309 MPNDQ8N594 471 aa8.78□□□□□ -1
PSMB3-212ENST00000620309 GREM2Q9H772 168 aa8.78□□□□□ -1
PSMB3-212ENST00000620309 MYO5AQ9Y4I1 1855 aaKnown RBP8.78□□□□□ -1
PSMB3-212ENST00000620309 HMMRO75330 724 aa8.77□□□□□ -1.01
PSMB3-212ENST00000620309 IARSP41252 1262 aaKnown RBP8.77□□□□□ -1.01
PSMB3-212ENST00000620309 EIF6P56537 245 aaKnown RBP8.77□□□□□ -1.01
PSMB3-212ENST00000620309 RPS8P62241 208 aaKnown RBP8.77□□□□□ -1.01
PSMB3-212ENST00000620309 ATP8B2P98198 1209 aa8.77□□□□□ -1.01
PSMB3-212ENST00000620309 PTPN12Q05209 780 aaKnown RBP8.77□□□□□ -1.01
PSMB3-212ENST00000620309 IFIT5Q13325 482 aaKnown RBP8.77□□□□□ -1.01
PSMB3-212ENST00000620309 SMC5Q8IY18 1101 aa8.77□□□□□ -1.01
PSMB3-212ENST00000620309 NIM1KQ8IY84 436 aa8.77□□□□□ -1.01
PSMB3-212ENST00000620309 ANKIB1Q9P2G1 1089 aa8.77□□□□□ -1.01
PSMB3-212ENST00000620309 IQCA1LA6NCM1 817 aa8.76□□□□□ -1.01
PSMB3-212ENST00000620309 PPIP5K2O43314 1243 aa8.76□□□□□ -1.01
PSMB3-212ENST00000620309 IGHDP01880 384 aa8.76□□□□□ -1.01
PSMB3-212ENST00000620309 ITGA6P23229 1130 aa8.76□□□□□ -1.01
PSMB3-212ENST00000620309 KCNJ4P48050 445 aa8.76□□□□□ -1.01
PSMB3-212ENST00000620309 B4GALNT3Q6L9W6 998 aa8.76□□□□□ -1.01
PSMB3-212ENST00000620309 CENPQQ7L2Z9 268 aaPredicted RBP8.76□□□□□ -1.01
PSMB3-212ENST00000620309 LARGE2Q8N3Y3 721 aa8.76□□□□□ -1.01
PSMB3-212ENST00000620309 CCDC85AQ96PX6 553 aaPredicted RBP8.76□□□□□ -1.01
PSMB3-212ENST00000620309 MCOLN1Q9GZU1 580 aa8.76□□□□□ -1.01
PSMB3-212ENST00000620309 ANKRD2Q9GZV1 360 aa8.76□□□□□ -1.01
PSMB3-212ENST00000620309 COPRSQ9NQ92 184 aa8.76□□□□□ -1.01
PSMB3-212ENST00000620309 NSFL1CQ9UNZ2 370 aaKnown RBP8.76□□□□□ -1.01
PSMB3-212ENST00000620309 NOP58Q9Y2X3 529 aaKnown RBP8.76□□□□□ -1.01
PSMB3-212ENST00000620309 XDHP47989 1333 aa8.76□□□□□ -1.01
PSMB3-212ENST00000620309 C6orf229H3BNL8 230 aa8.75□□□□□ -1.01
PSMB3-212ENST00000620309 CIAO1O76071 339 aa8.75□□□□□ -1.01
PSMB3-212ENST00000620309 KLHDC4Q8TBB5 520 aa8.75□□□□□ -1.01
PSMB3-212ENST00000620309 CCDC136Q96JN2 1154 aa8.75□□□□□ -1.01
PSMB3-212ENST00000620309 DCTPP1Q9H773 170 aa8.75□□□□□ -1.01
PSMB3-212ENST00000620309 SEC31BQ9NQW1 1179 aa8.75□□□□□ -1.01
PSMB3-212ENST00000620309 GGA1Q9UJY5 639 aa8.75□□□□□ -1.01
PSMB3-212ENST00000620309 PA2G4Q9UQ80 394 aaKnown RBP8.75□□□□□ -1.01
PSMB3-212ENST00000620309 EXOC6BQ9Y2D4 811 aa8.75□□□□□ -1.01
PSMB3-212ENST00000620309 SCN9AQ15858 1988 aa8.75□□□□□ -1.01
PSMB3-212ENST00000620309 MKI67P46013 3256 aaKnown RBP8.74□□□□□ -1.01
PSMB3-212ENST00000620309 LMOD1P29536 600 aaPredicted RBP8.74□□□□□ -1.01
PSMB3-212ENST00000620309 WASHC4Q2M389 1173 aa8.74□□□□□ -1.01
PSMB3-212ENST00000620309 PRPF38BQ5VTL8 546 aaKnown RBP8.74□□□□□ -1.01
PSMB3-212ENST00000620309 ATG9AQ7Z3C6 839 aa8.74□□□□□ -1.01
PSMB3-212ENST00000620309 SLC51AQ86UW1 340 aa8.74□□□□□ -1.01
PSMB3-212ENST00000620309 VGLL2Q8N8G2 317 aa8.74□□□□□ -1.01
PSMB3-212ENST00000620309 C7orf43Q8WVR3 580 aa8.74□□□□□ -1.01
PSMB3-212ENST00000620309 CELF1Q92879 486 aaKnown RBP8.74□□□□□ -1.01
PSMB3-212ENST00000620309 GCC1Q96CN9 775 aa8.74□□□□□ -1.01
PSMB3-212ENST00000620309 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
PSMB3-212ENST00000620309 RWDD1Q9H446 243 aaPredicted RBP8.74□□□□□ -1.01
PSMB3-212ENST00000620309 ZNF277Q9NRM2 450 aaPredicted RBP8.74□□□□□ -1.01
PSMB3-212ENST00000620309 CNNM1Q9NRU3 951 aa8.74□□□□□ -1.01
PSMB3-212ENST00000620309 BSDC1Q9NW68 430 aaPredicted RBP8.74□□□□□ -1.01
PSMB3-212ENST00000620309 FBXO3Q9UK99 471 aa8.74□□□□□ -1.01
PSMB3-212ENST00000620309 ECM29Q5VYK3 1845 aa8.74□□□□□ -1.01
PSMB3-212ENST00000620309 EYA2O00167 538 aa8.73□□□□□ -1.01
PSMB3-212ENST00000620309 UFL1O94874 794 aa8.73□□□□□ -1.01
PSMB3-212ENST00000620309 ATP2B4P23634 1241 aa8.73□□□□□ -1.01
PSMB3-212ENST00000620309 CNTROBQ8N137 903 aa8.73□□□□□ -1.01
PSMB3-212ENST00000620309 CAPNS2Q96L46 248 aa8.73□□□□□ -1.01
PSMB3-212ENST00000620309 RTFDC1Q9BY42 306 aaPredicted RBP8.73□□□□□ -1.01
PSMB3-212ENST00000620309 ZC3H12CQ9C0D7 883 aaKnown RBP8.73□□□□□ -1.01
PSMB3-212ENST00000620309 MROH5Q6ZUA9 1318 aa8.73□□□□□ -1.01
PSMB3-212ENST00000620309 ZNF541Q9H0D2 1346 aa8.73□□□□□ -1.01
PSMB3-212ENST00000620309 MED23Q9ULK4 1368 aa8.73□□□□□ -1.01
PSMB3-212ENST00000620309 SURF6O75683 361 aaKnown RBP8.72□□□□□ -1.01
PSMB3-212ENST00000620309 SASH1O94885 1247 aa8.72□□□□□ -1.01
PSMB3-212ENST00000620309 KIAA2012Q0VF49 1180 aa8.72□□□□□ -1.01
PSMB3-212ENST00000620309 TNIP1Q15025 636 aa8.72□□□□□ -1.01
PSMB3-212ENST00000620309 AOC3Q16853 763 aa8.72□□□□□ -1.01
PSMB3-212ENST00000620309 LRRC24Q50LG9 513 aa8.72□□□□□ -1.01
PSMB3-212ENST00000620309 LDHAL6AQ6ZMR3 332 aa8.72□□□□□ -1.01
PSMB3-212ENST00000620309 PUS3Q9BZE2 481 aaKnown RBP8.72□□□□□ -1.01
PSMB3-212ENST00000620309 SIL1Q9H173 461 aa8.72□□□□□ -1.01
PSMB3-212ENST00000620309 PODXL2Q9NZ53 605 aa8.72□□□□□ -1.01
PSMB3-212ENST00000620309 LEMD3Q9Y2U8 911 aa8.72□□□□□ -1.01
PSMB3-212ENST00000620309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.72□□□□□ -1.01
PSMB3-212ENST00000620309 SALL3Q9BXA9 1300 aa8.72□□□□□ -1.01
PSMB3-212ENST00000620309 COL4A5P29400 1685 aa8.72□□□□□ -1.01
PSMB3-212ENST00000620309 COL1A1P02452 1464 aaPredicted RBP8.71□□□□□ -1.01
PSMB3-212ENST00000620309 CDK5RAP2Q96SN8 1893 aa8.71□□□□□ -1.01
PSMB3-212ENST00000620309 RAB11FIP3O75154 756 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 EPHX2P34913 555 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 MAP2K2P36507 400 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 IL15P40933 162 aaPredicted RBP8.71□□□□□ -1.02
PSMB3-212ENST00000620309 GPSM2P81274 684 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 NUCB1Q02818 461 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 HSP90AB4PQ58FF6 505 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 MAP1SQ66K74 1059 aaPredicted RBP8.71□□□□□ -1.02
PSMB3-212ENST00000620309 CYP4F22Q6NT55 531 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 PNMA8AQ86V59 439 aaPredicted RBP8.71□□□□□ -1.02
PSMB3-212ENST00000620309 ERC1Q8IUD2 1116 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 GPC2Q8N158 579 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 RHPN1Q8TCX5 695 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 KIF1BPQ96EK5 621 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 GPR101Q96P66 508 aaPredicted RBP8.71□□□□□ -1.02
PSMB3-212ENST00000620309 HACL1Q9UJ83 578 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 TSKSQ9UJT2 592 aa8.71□□□□□ -1.02
PSMB3-212ENST00000620309 RIPOR2Q9Y4F9 1068 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms