RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 USP27XA6NNY8 438 aa15.36■□□□□ 0.05
SKP2-209ENST00000620197 FDPSP14324 419 aaKnown RBP15.36■□□□□ 0.05
SKP2-209ENST00000620197 U2AF2P26368 475 aaKnown RBP eCLIP15.36■□□□□ 0.05
SKP2-209ENST00000620197 FAM160A1Q05DH4 1040 aa15.36■□□□□ 0.05
SKP2-209ENST00000620197 PSME1Q06323 249 aa15.36■□□□□ 0.05
SKP2-209ENST00000620197 ZMYM1Q5SVZ6 1142 aa15.36■□□□□ 0.05
SKP2-209ENST00000620197 COPS6Q7L5N1 327 aa15.36■□□□□ 0.05
SKP2-209ENST00000620197 RIC3Q7Z5B4 369 aa15.36■□□□□ 0.05
SKP2-209ENST00000620197 C16orf45Q96MC5 204 aaPredicted RBP15.36■□□□□ 0.05
SKP2-209ENST00000620197 USP28Q96RU2 1077 aa15.36■□□□□ 0.05
SKP2-209ENST00000620197 FTOQ9C0B1 505 aaKnown RBP eCLIP15.36■□□□□ 0.05
SKP2-209ENST00000620197 OGFRQ9NZT2 677 aa15.36■□□□□ 0.05
SKP2-209ENST00000620197 MORC2Q9Y6X9 1032 aaPredicted RBP15.36■□□□□ 0.05
SKP2-209ENST00000620197 CARMIL3Q8ND23 1372 aa15.36■□□□□ 0.05
SKP2-209ENST00000620197 A0A1W2PQ27 194 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 A0A1W2PQ64 194 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 A0A1W2PQD8 194 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 TNNT1P13805 278 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 KCNJ6P48051 423 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 MYD88Q99836 296 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.35■□□□□ 0.05
SKP2-209ENST00000620197 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 RTEL1Q9NZ71 1219 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 TAOK2Q9UL54 1235 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 PTPDC1A2A3K4 754 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 H7C1W4 665 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 ARID5BQ14865 1188 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 ANKRD13DQ6ZTN6 518 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 CCAR1Q8IX12 1150 aaKnown RBP15.35■□□□□ 0.05
SKP2-209ENST00000620197 BICD2Q8TD16 824 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.35■□□□□ 0.05
SKP2-209ENST00000620197 NDUFB9Q9Y6M9 179 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 LRP6O75581 1613 aa15.35■□□□□ 0.05
SKP2-209ENST00000620197 KIF20AO95235 890 aa15.34■□□□□ 0.05
SKP2-209ENST00000620197 NEXNQ0ZGT2 675 aa15.34■□□□□ 0.05
SKP2-209ENST00000620197 ZNF496Q96IT1 587 aaPredicted RBP15.34■□□□□ 0.05
SKP2-209ENST00000620197 C1orf167Q5SNV9 1468 aa15.34■□□□□ 0.05
SKP2-209ENST00000620197 A0A0G2JLW4 131 aa15.34■□□□□ 0.05
SKP2-209ENST00000620197 GOLGA6L4A6NEF3 574 aa15.34■□□□□ 0.05
SKP2-209ENST00000620197 PDIA3P30101 505 aaKnown RBP15.34■□□□□ 0.05
SKP2-209ENST00000620197 AIMP1Q12904 312 aaKnown RBP15.34■□□□□ 0.05
SKP2-209ENST00000620197 SLFNL1Q499Z3 407 aa15.34■□□□□ 0.05
SKP2-209ENST00000620197 ESCO1Q5FWF5 840 aa15.34■□□□□ 0.05
SKP2-209ENST00000620197 DOCK2Q92608 1830 aa15.33■□□□□ 0.05
SKP2-209ENST00000620197 CCAR2Q8N163 923 aaKnown RBP15.33■□□□□ 0.04
SKP2-209ENST00000620197 CHD4Q14839 1912 aa15.33■□□□□ 0.04
SKP2-209ENST00000620197 E7EWF7 191 aa15.33■□□□□ 0.04
SKP2-209ENST00000620197 SLC39A6Q13433 755 aa15.33■□□□□ 0.04
SKP2-209ENST00000620197 CEP135Q66GS9 1140 aa15.33■□□□□ 0.04
SKP2-209ENST00000620197 CGNQ9P2M7 1197 aaKnown RBP15.33■□□□□ 0.04
SKP2-209ENST00000620197 TOGARAM1Q9Y4F4 1720 aa15.33■□□□□ 0.04
SKP2-209ENST00000620197 MYO5AQ9Y4I1 1855 aaKnown RBP15.33■□□□□ 0.04
SKP2-209ENST00000620197 STRCP1A6NGW2 1772 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 HSPD1P10809 573 aaKnown RBP15.32■□□□□ 0.04
SKP2-209ENST00000620197 CCDC93Q567U6 631 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 C14orf37Q86TY3 774 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 L2HGDHQ9H9P8 463 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 IMPACTQ9P2X3 320 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 MAST3O60307 1309 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 NHSL1Q5SYE7 1610 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 ADALQ6DHV7 355 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 KIF18AQ8NI77 898 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 ORAI2Q96SN7 254 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 HSD3B7Q9H2F3 369 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 APOBRQ0VD83 1088 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 PLBD2Q8NHP8 589 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 PCDHA7Q9UN72 937 aa15.32■□□□□ 0.04
SKP2-209ENST00000620197 TIAM2Q8IVF5 1701 aa15.31■□□□□ 0.04
SKP2-209ENST00000620197 NAA30Q147X3 362 aaPredicted RBP15.31■□□□□ 0.04
SKP2-209ENST00000620197 ANO10Q9NW15 660 aa15.31■□□□□ 0.04
SKP2-209ENST00000620197 ANKRD36CQ5JPF3 1778 aa15.31■□□□□ 0.04
SKP2-209ENST00000620197 H3BQV1 296 aa15.31■□□□□ 0.04
SKP2-209ENST00000620197 SNRPA1P09661 255 aaKnown RBP15.31■□□□□ 0.04
SKP2-209ENST00000620197 NCAPHQ15003 741 aa15.31■□□□□ 0.04
SKP2-209ENST00000620197 IFFO2Q5TF58 517 aa15.31■□□□□ 0.04
SKP2-209ENST00000620197 DDX46Q7L014 1031 aaKnown RBP15.31■□□□□ 0.04
SKP2-209ENST00000620197 NFATC2IPQ8NCF5 419 aa15.31■□□□□ 0.04
SKP2-209ENST00000620197 LINC00301Q8NCQ3 95 aa15.31■□□□□ 0.04
SKP2-209ENST00000620197 POLR3EQ9NVU0 708 aa15.31■□□□□ 0.04
SKP2-209ENST00000620197 PAG1Q9NWQ8 432 aa15.31■□□□□ 0.04
SKP2-209ENST00000620197 TNS2Q63HR2 1409 aa15.31■□□□□ 0.04
SKP2-209ENST00000620197 MYL6BP14649 208 aa15.3■□□□□ 0.04
SKP2-209ENST00000620197 LRRC2Q9BYS8 371 aa15.3■□□□□ 0.04
SKP2-209ENST00000620197 HPS5Q9UPZ3 1129 aa15.3■□□□□ 0.04
SKP2-209ENST00000620197 ATRNO75882 1429 aa15.3■□□□□ 0.04
SKP2-209ENST00000620197 CIAO1O76071 339 aa15.3■□□□□ 0.04
SKP2-209ENST00000620197 UBE3BQ7Z3V4 1068 aa15.3■□□□□ 0.04
SKP2-209ENST00000620197 ZNF396Q96N95 335 aaPredicted RBP15.3■□□□□ 0.04
SKP2-209ENST00000620197 ATG3Q9NT62 314 aa15.3■□□□□ 0.04
SKP2-209ENST00000620197 WDR19Q8NEZ3 1342 aa15.3■□□□□ 0.04
SKP2-209ENST00000620197 MYH3P11055 1940 aa15.3■□□□□ 0.04
SKP2-209ENST00000620197 LRP5O75197 1615 aa15.3■□□□□ 0.04
SKP2-209ENST00000620197 CCDC69A6NI79 296 aa15.3■□□□□ 0.04
SKP2-209ENST00000620197 CCDC112Q8NEF3 446 aa15.3■□□□□ 0.04
SKP2-209ENST00000620197 FAM237AA0A1B0GTK4 181 aa15.29■□□□□ 0.04
SKP2-209ENST00000620197 SKILP12757 684 aa15.29■□□□□ 0.04
SKP2-209ENST00000620197 TULP1O00294 542 aaPredicted RBP15.29■□□□□ 0.04
SKP2-209ENST00000620197 GABPB1Q06547 395 aaPredicted RBP15.29■□□□□ 0.04
SKP2-209ENST00000620197 KMT5BQ4FZB7 885 aa15.29■□□□□ 0.04
SKP2-209ENST00000620197 E4F1Q66K89 784 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms