RNA–Protein interactions for RNA: ENST00000619554.1

NBPF3-213, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 1,831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-213ENST00000619554 CAVIN4Q5BKX8 364 aa12.85□□□□□ -0.35
NBPF3-213ENST00000619554 VPS37DQ86XT2 251 aa12.85□□□□□ -0.35
NBPF3-213ENST00000619554 RHPN1Q8TCX5 695 aa12.85□□□□□ -0.35
NBPF3-213ENST00000619554 LPIN2Q92539 896 aa12.85□□□□□ -0.35
NBPF3-213ENST00000619554 RTFDC1Q9BY42 306 aaPredicted RBP12.85□□□□□ -0.35
NBPF3-213ENST00000619554 VPS33BQ9H267 617 aa12.85□□□□□ -0.35
NBPF3-213ENST00000619554 POLLQ9UGP5 575 aa12.85□□□□□ -0.35
NBPF3-213ENST00000619554 GORABQ5T7V8 394 aa12.84□□□□□ -0.35
NBPF3-213ENST00000619554 NEUROD6Q96NK8 337 aa12.84□□□□□ -0.35
NBPF3-213ENST00000619554 ZNF277Q9NRM2 450 aaPredicted RBP12.84□□□□□ -0.35
NBPF3-213ENST00000619554 COL11A2P13942 1736 aaPredicted RBP12.84□□□□□ -0.35
NBPF3-213ENST00000619554 PPIP5K2O43314 1243 aa12.83□□□□□ -0.35
NBPF3-213ENST00000619554 SASH1O94885 1247 aa12.83□□□□□ -0.35
NBPF3-213ENST00000619554 ANKRD45Q5TZF3 282 aa12.83□□□□□ -0.35
NBPF3-213ENST00000619554 SLC51AQ86UW1 340 aa12.83□□□□□ -0.35
NBPF3-213ENST00000619554 SMC5Q8IY18 1101 aa12.83□□□□□ -0.35
NBPF3-213ENST00000619554 LARGE2Q8N3Y3 721 aa12.83□□□□□ -0.35
NBPF3-213ENST00000619554 VGLL2Q8N8G2 317 aa12.83□□□□□ -0.35
NBPF3-213ENST00000619554 GPR108Q9NPR9 543 aa12.83□□□□□ -0.35
NBPF3-213ENST00000619554 CHMP5Q9NZZ3 219 aa12.83□□□□□ -0.35
NBPF3-213ENST00000619554 NFKBIEO00221 500 aa12.83□□□□□ -0.36
NBPF3-213ENST00000619554 RIMBP2O15034 1052 aa12.83□□□□□ -0.36
NBPF3-213ENST00000619554 IFIT2P09913 472 aaKnown RBP12.83□□□□□ -0.36
NBPF3-213ENST00000619554 MYH3P11055 1940 aa12.83□□□□□ -0.36
NBPF3-213ENST00000619554 JDP2Q8WYK2 163 aa12.83□□□□□ -0.36
NBPF3-213ENST00000619554 IL1RAPL2Q9NP60 686 aa12.83□□□□□ -0.36
NBPF3-213ENST00000619554 LTBP3Q9NS15 1303 aa12.83□□□□□ -0.36
NBPF3-213ENST00000619554 ISY1Q9ULR0 285 aaKnown RBP12.83□□□□□ -0.36
NBPF3-213ENST00000619554 A0A1B0GUL7 405 aa12.82□□□□□ -0.36
NBPF3-213ENST00000619554 SNAP23O00161 211 aa12.82□□□□□ -0.36
NBPF3-213ENST00000619554 LMNB1P20700 586 aa12.82□□□□□ -0.36
NBPF3-213ENST00000619554 MCM4P33991 863 aa12.82□□□□□ -0.36
NBPF3-213ENST00000619554 IARSP41252 1262 aaKnown RBP12.82□□□□□ -0.36
NBPF3-213ENST00000619554 TIMM10P62072 90 aa12.82□□□□□ -0.36
NBPF3-213ENST00000619554 RASSF7Q02833 373 aa12.82□□□□□ -0.36
NBPF3-213ENST00000619554 TNNI3KQ59H18 835 aa12.82□□□□□ -0.36
NBPF3-213ENST00000619554 ZNF804AQ7Z570 1209 aa12.82□□□□□ -0.36
NBPF3-213ENST00000619554 AACSQ86V21 672 aa12.82□□□□□ -0.36
NBPF3-213ENST00000619554 C22orf23Q9BZE7 217 aa12.82□□□□□ -0.36
NBPF3-213ENST00000619554 SLKQ9H2G2 1235 aaPredicted RBP12.82□□□□□ -0.36
NBPF3-213ENST00000619554 FPGT-TNNI3KV9GXZ4 949 aa12.82□□□□□ -0.36
NBPF3-213ENST00000619554 FSD2A1L4K1 749 aa12.81□□□□□ -0.36
NBPF3-213ENST00000619554 KIAA2012Q0VF49 1180 aa12.81□□□□□ -0.36
NBPF3-213ENST00000619554 AOC3Q16853 763 aa12.81□□□□□ -0.36
NBPF3-213ENST00000619554 GPR101Q96P66 508 aaPredicted RBP12.81□□□□□ -0.36
NBPF3-213ENST00000619554 GNL3LQ9NVN8 582 aaKnown RBP12.81□□□□□ -0.36
NBPF3-213ENST00000619554 SLX4Q8IY92 1834 aa12.81□□□□□ -0.36
NBPF3-213ENST00000619554 FGFR2P21802 821 aa12.81□□□□□ -0.36
NBPF3-213ENST00000619554 HIBADHP31937 336 aaKnown RBP12.81□□□□□ -0.36
NBPF3-213ENST00000619554 C15orf52Q6ZUT6 534 aaKnown RBP12.81□□□□□ -0.36
NBPF3-213ENST00000619554 NIM1KQ8IY84 436 aa12.81□□□□□ -0.36
NBPF3-213ENST00000619554 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
NBPF3-213ENST00000619554 WTIPA6NIX2 430 aaPredicted RBP12.8□□□□□ -0.36
NBPF3-213ENST00000619554 SMARCA5O60264 1052 aaPredicted RBP12.8□□□□□ -0.36
NBPF3-213ENST00000619554 CCDC158Q5M9N0 1113 aa12.8□□□□□ -0.36
NBPF3-213ENST00000619554 SNX21Q969T3 373 aa12.8□□□□□ -0.36
NBPF3-213ENST00000619554 XAGE2Q96GT9 111 aa12.8□□□□□ -0.36
NBPF3-213ENST00000619554 GPATCH3Q96I76 525 aa12.8□□□□□ -0.36
NBPF3-213ENST00000619554 COA1Q9GZY4 146 aa12.8□□□□□ -0.36
NBPF3-213ENST00000619554 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
NBPF3-213ENST00000619554 KIAA1551Q9HCM1 1747 aa12.8□□□□□ -0.36
NBPF3-213ENST00000619554 GYG1P46976 350 aa12.79□□□□□ -0.36
NBPF3-213ENST00000619554 RBM25P49756 843 aaKnown RBP12.79□□□□□ -0.36
NBPF3-213ENST00000619554 DOK7Q18PE1 504 aa12.79□□□□□ -0.36
NBPF3-213ENST00000619554 CCDC8Q9H0W5 538 aaPredicted RBP12.79□□□□□ -0.36
NBPF3-213ENST00000619554 DLEC1Q9Y238 1755 aa12.79□□□□□ -0.36
NBPF3-213ENST00000619554 COL4A1P02462 1669 aa12.79□□□□□ -0.36
NBPF3-213ENST00000619554 KLRK1P26718 216 aa12.78□□□□□ -0.36
NBPF3-213ENST00000619554 BCAMP50895 628 aa12.78□□□□□ -0.36
NBPF3-213ENST00000619554 C9orf131Q5VYM1 1079 aa12.78□□□□□ -0.36
NBPF3-213ENST00000619554 EAF2Q96CJ1 260 aaPredicted RBP12.78□□□□□ -0.36
NBPF3-213ENST00000619554 FAM84BQ96KN1 310 aaPredicted RBP12.78□□□□□ -0.36
NBPF3-213ENST00000619554 GOLGA6L3A6NEY3 463 aa12.78□□□□□ -0.36
NBPF3-213ENST00000619554 NUCB1Q02818 461 aa12.78□□□□□ -0.36
NBPF3-213ENST00000619554 TTC39AQ5SRH9 613 aa12.78□□□□□ -0.36
NBPF3-213ENST00000619554 PODNQ7Z5L7 613 aa12.78□□□□□ -0.36
NBPF3-213ENST00000619554 TXNRD3Q86VQ6 643 aa12.78□□□□□ -0.36
NBPF3-213ENST00000619554 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
NBPF3-213ENST00000619554 DBNDD1Q9H9R9 158 aa12.78□□□□□ -0.36
NBPF3-213ENST00000619554 ZNRF3Q9ULT6 936 aa12.78□□□□□ -0.36
NBPF3-213ENST00000619554 CIZ1Q9ULV3 898 aaPredicted RBP12.78□□□□□ -0.36
NBPF3-213ENST00000619554 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.78□□□□□ -0.36
NBPF3-213ENST00000619554 ECE2O60344 883 aa12.77□□□□□ -0.37
NBPF3-213ENST00000619554 EIF5BO60841 1220 aaKnown RBP12.77□□□□□ -0.37
NBPF3-213ENST00000619554 ADORA1P30542 326 aa12.77□□□□□ -0.37
NBPF3-213ENST00000619554 EIF6P56537 245 aaKnown RBP12.77□□□□□ -0.37
NBPF3-213ENST00000619554 CCDC102BQ68D86 513 aa12.77□□□□□ -0.37
NBPF3-213ENST00000619554 DBNDD2Q9BQY9 259 aa12.77□□□□□ -0.37
NBPF3-213ENST00000619554 LNPKQ9C0E8 428 aa12.77□□□□□ -0.37
NBPF3-213ENST00000619554 SNED1Q8TER0 1413 aa12.77□□□□□ -0.37
NBPF3-213ENST00000619554 TAF1P21675 1872 aa12.77□□□□□ -0.37
NBPF3-213ENST00000619554 DDX11L8A8MPP1 907 aa12.76□□□□□ -0.37
NBPF3-213ENST00000619554 UQCRFS1P1P0C7P4 283 aa12.76□□□□□ -0.37
NBPF3-213ENST00000619554 PTMSP20962 102 aa12.76□□□□□ -0.37
NBPF3-213ENST00000619554 FBXO33Q7Z6M2 555 aa12.76□□□□□ -0.37
NBPF3-213ENST00000619554 FBXW7Q969H0 707 aa12.76□□□□□ -0.37
NBPF3-213ENST00000619554 CD209Q9NNX6 404 aa12.76□□□□□ -0.37
NBPF3-213ENST00000619554 ZNF609O15014 1411 aa12.76□□□□□ -0.37
NBPF3-213ENST00000619554 PRKCSHP14314 528 aaPredicted RBP12.76□□□□□ -0.37
NBPF3-213ENST00000619554 DDIT3P35638 169 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms