RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 SH3BGRP55822 239 aaPredicted RBP12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 JPH4Q96JJ6 628 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 CCDC42Q96M95 316 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 PDE4BQ07343 736 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 UTP11Q9Y3A2 253 aaKnown RBP12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 GAS8O95995 478 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 FMNL3Q8IVF7 1028 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 PFDN4Q9NQP4 134 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 GABPB1Q06547 395 aaPredicted RBP12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 PRR16Q569H4 304 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 CCDC26Q8TAB7 109 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 ARHGEF2Q92974 986 aaKnown RBP12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 KARSQ15046 597 aaKnown RBP12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 TOM1L2Q6ZVM7 507 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 SSH1Q8WYL5 1049 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 CCT6BQ92526 530 aa12.99□□□□□ -0.33
PCDHA4-204ENST00000618834 STARD3NLO95772 234 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 ZNF131P52739 623 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 ATP6V0A2Q9Y487 856 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 GIGYF1O75420 1035 aaPredicted RBP12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 ASIC1P78348 528 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 ATAD2Q6PL18 1390 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 CETN3O15182 167 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 RARSP54136 660 aaKnown RBP12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 LRCH2Q5VUJ6 765 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 CNGA4Q8IV77 575 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 DNAJC25Q9H1X3 360 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 KAT14Q9H8E8 782 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 CLUL1Q15846 466 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 NCOA7Q8NI08 942 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 AFAP1L2Q8N4X5 818 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 I3L4J1 428 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 ANKRD24Q8TF21 1146 aa12.98□□□□□ -0.33
PCDHA4-204ENST00000618834 PLCB3Q01970 1234 aa12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 RNF10Q8N5U6 811 aaKnown RBP12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 MTUS1Q9ULD2 1270 aa12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 CALCOCO2Q13137 446 aa12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 MSANTD4Q8NCY6 345 aa12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 ERO1AQ96HE7 468 aa12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 TBC1D31Q96DN5 1066 aa12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 ZBTB9Q96C00 473 aa12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 ITSN2Q9NZM3 1697 aa12.97□□□□□ -0.33
PCDHA4-204ENST00000618834 PPFIA2O75334 1257 aa12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 TUBB2AQ13885 445 aa12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 TAOK1Q7L7X3 1001 aa12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 RAB3IPQ96QF0 476 aaPredicted RBP12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 MPHOSPH6Q99547 160 aaKnown RBP12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 TUBB2BQ9BVA1 445 aa12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 UAP1Q16222 522 aaPredicted RBP12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 IMPG2Q9BZV3 1241 aa12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 KIF14Q15058 1648 aa12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 EVCP57679 992 aa12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 MYCBPQ99417 103 aaPredicted RBP12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 RRS1Q15050 365 aaKnown RBP12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 MIS18AQ9NYP9 233 aa12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 TLDC2A0PJX2 215 aa12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 PRIM1P49642 420 aaKnown RBP12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 SYT10Q6XYQ8 523 aa12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 VCX3AQ9NNX9 186 aa12.96□□□□□ -0.33
PCDHA4-204ENST00000618834 IGSF3O75054 1194 aa12.96□□□□□ -0.34
PCDHA4-204ENST00000618834 LMOD1P29536 600 aaPredicted RBP12.96□□□□□ -0.34
PCDHA4-204ENST00000618834 GSDMBQ8TAX9 411 aa12.96□□□□□ -0.34
PCDHA4-204ENST00000618834 MYH10P35580 1976 aa12.96□□□□□ -0.34
PCDHA4-204ENST00000618834 ZBTB17Q13105 803 aa12.96□□□□□ -0.34
PCDHA4-204ENST00000618834 PLCB1Q9NQ66 1216 aa12.96□□□□□ -0.34
PCDHA4-204ENST00000618834 TMCO4Q5TGY1 634 aa12.96□□□□□ -0.34
PCDHA4-204ENST00000618834 IFT20Q8IY31 132 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 INF2Q27J81 1249 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 GEN1Q17RS7 908 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 FGD5Q6ZNL6 1462 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 GOLGA6BA6NDN3 693 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 VGLL3A8MV65 326 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 NEK1Q96PY6 1258 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 PPP1R9BQ96SB3 815 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 CSRNP2Q9H175 543 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 CABP1Q9NZU7 370 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 TRIM4Q9C037 500 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 CCDC122Q5T0U0 273 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 NAPGQ99747 312 aaPredicted RBP12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 TACC3Q9Y6A5 838 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 SDCCAG8Q86SQ7 713 aaPredicted RBP12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 IFNKQ9P0W0 207 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 FAM169AQ9Y6X4 670 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 HDAC9Q9UKV0 1011 aa12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
PCDHA4-204ENST00000618834 GCKP35557 465 aa12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 TMX3Q96JJ7 454 aa12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 LUC7L3O95232 432 aaKnown RBP12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 WHAMMQ8TF30 809 aa12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 FAM13AO94988 1023 aa12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 KRT23Q9C075 422 aa12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 SLC12A5Q9H2X9 1139 aa12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 MUM1Q2TAK8 710 aa12.94□□□□□ -0.34
PCDHA4-204ENST00000618834 ECHDC1Q9NTX5 307 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms