RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 HIF3AQ9Y2N7 669 aa6.66□□□□□ -1.34
TARDBP-220ENST00000618606 ADAM11O75078 769 aa6.65□□□□□ -1.34
TARDBP-220ENST00000618606 COL13A1Q5TAT6 717 aaPredicted RBP6.65□□□□□ -1.34
TARDBP-220ENST00000618606 ADAMTSL4Q6UY14 1074 aa6.65□□□□□ -1.34
TARDBP-220ENST00000618606 KCNF1Q9H3M0 494 aa6.65□□□□□ -1.34
TARDBP-220ENST00000618606 PIM2Q9P1W9 311 aa6.65□□□□□ -1.34
TARDBP-220ENST00000618606 WDR64B1ANS9 1081 aa6.64□□□□□ -1.35
TARDBP-220ENST00000618606 DDX3YO15523 660 aaKnown RBP6.64□□□□□ -1.35
TARDBP-220ENST00000618606 SART1O43290 800 aaKnown RBP6.64□□□□□ -1.35
TARDBP-220ENST00000618606 RFX1P22670 979 aa6.64□□□□□ -1.35
TARDBP-220ENST00000618606 HOXA10P31260 410 aaPredicted RBP6.64□□□□□ -1.35
TARDBP-220ENST00000618606 PREPP48147 710 aa6.64□□□□□ -1.35
TARDBP-220ENST00000618606 CDCA8Q53HL2 280 aa6.64□□□□□ -1.35
TARDBP-220ENST00000618606 ETFBKMTQ8IXQ9 262 aa6.64□□□□□ -1.35
TARDBP-220ENST00000618606 POU5F2Q8N7G0 328 aa6.64□□□□□ -1.35
TARDBP-220ENST00000618606 UBASH3BQ8TF42 649 aa6.64□□□□□ -1.35
TARDBP-220ENST00000618606 SEC31BQ9NQW1 1179 aa6.64□□□□□ -1.35
TARDBP-220ENST00000618606 KIF4AO95239 1232 aa6.63□□□□□ -1.35
TARDBP-220ENST00000618606 EPHA1P21709 976 aa6.63□□□□□ -1.35
TARDBP-220ENST00000618606 CDC25BP30305 580 aa6.63□□□□□ -1.35
TARDBP-220ENST00000618606 CBLL1Q75N03 491 aa6.63□□□□□ -1.35
TARDBP-220ENST00000618606 KLHDC7BQ96G42 594 aa6.63□□□□□ -1.35
TARDBP-220ENST00000618606 RNF208Q9H0X6 261 aa6.63□□□□□ -1.35
TARDBP-220ENST00000618606 RASSF4Q9H2L5 321 aa6.63□□□□□ -1.35
TARDBP-220ENST00000618606 UBAP1LF5GYI3 381 aa6.62□□□□□ -1.35
TARDBP-220ENST00000618606 BRD2P25440 801 aaKnown RBP6.62□□□□□ -1.35
TARDBP-220ENST00000618606 FKBP5Q13451 457 aaPredicted RBP6.62□□□□□ -1.35
TARDBP-220ENST00000618606 MSMPQ1L6U9 139 aa6.62□□□□□ -1.35
TARDBP-220ENST00000618606 SWI5Q1ZZU3 235 aa6.62□□□□□ -1.35
TARDBP-220ENST00000618606 GIMAP7Q8NHV1 300 aa6.62□□□□□ -1.35
TARDBP-220ENST00000618606 WNT8BQ93098 351 aa6.62□□□□□ -1.35
TARDBP-220ENST00000618606 ASIC4Q96FT7 647 aa6.62□□□□□ -1.35
TARDBP-220ENST00000618606 PBX4Q9BYU1 374 aa6.62□□□□□ -1.35
TARDBP-220ENST00000618606 ADAM19Q9H013 955 aa6.62□□□□□ -1.35
TARDBP-220ENST00000618606 SH2B1Q9NRF2 756 aaPredicted RBP6.62□□□□□ -1.35
TARDBP-220ENST00000618606 FAM13BQ9NYF5 915 aa6.62□□□□□ -1.35
TARDBP-220ENST00000618606 ANGEL1Q9UNK9 670 aaKnown RBP6.62□□□□□ -1.35
TARDBP-220ENST00000618606 NOVA2Q9UNW9 492 aaKnown RBP6.62□□□□□ -1.35
TARDBP-220ENST00000618606 ACIN1Q9UKV3 1341 aaKnown RBP6.61□□□□□ -1.35
TARDBP-220ENST00000618606 PRNPP04156 253 aa6.61□□□□□ -1.35
TARDBP-220ENST00000618606 C8AP07357 584 aa6.61□□□□□ -1.35
TARDBP-220ENST00000618606 PTPRAP18433 802 aa6.61□□□□□ -1.35
TARDBP-220ENST00000618606 SCNN1AP37088 669 aa6.61□□□□□ -1.35
TARDBP-220ENST00000618606 SRPK2P78362 688 aaKnown RBP6.61□□□□□ -1.35
TARDBP-220ENST00000618606 FAM69CQ0P6D2 419 aa6.61□□□□□ -1.35
TARDBP-220ENST00000618606 ELOAQ14241 798 aaKnown RBP6.61□□□□□ -1.35
TARDBP-220ENST00000618606 CPSF6Q16630 551 aaKnown RBP eCLIP6.61□□□□□ -1.35
TARDBP-220ENST00000618606 PIK3R5Q8WYR1 880 aa6.61□□□□□ -1.35
TARDBP-220ENST00000618606 MFSD14AQ96MC6 490 aa6.61□□□□□ -1.35
TARDBP-220ENST00000618606 OSGEPQ9NPF4 335 aa6.61□□□□□ -1.35
TARDBP-220ENST00000618606 CCDC39Q9UFE4 941 aa6.61□□□□□ -1.35
TARDBP-220ENST00000618606 FOSL1P15407 271 aa6.6□□□□□ -1.35
TARDBP-220ENST00000618606 PIP4K2BP78356 416 aa6.6□□□□□ -1.35
TARDBP-220ENST00000618606 OCLNQ16625 522 aa6.6□□□□□ -1.35
TARDBP-220ENST00000618606 TTC39BQ5VTQ0 682 aaPredicted RBP6.6□□□□□ -1.35
TARDBP-220ENST00000618606 CEP120Q8N960 986 aa6.6□□□□□ -1.35
TARDBP-220ENST00000618606 COL26A1Q96A83 441 aa6.6□□□□□ -1.35
TARDBP-220ENST00000618606 PRIMPOLQ96LW4 560 aa6.6□□□□□ -1.35
TARDBP-220ENST00000618606 FBXL18Q96ME1 805 aa6.6□□□□□ -1.35
TARDBP-220ENST00000618606 ATG3Q9NT62 314 aa6.6□□□□□ -1.35
TARDBP-220ENST00000618606 LEMD3Q9Y2U8 911 aa6.6□□□□□ -1.35
TARDBP-220ENST00000618606 MEGF11A6BM72 1044 aa6.59□□□□□ -1.35
TARDBP-220ENST00000618606 FAM177BA6PVY3 158 aa6.59□□□□□ -1.35
TARDBP-220ENST00000618606 H3BRJ5 948 aa6.59□□□□□ -1.35
TARDBP-220ENST00000618606 F13BP05160 661 aa6.59□□□□□ -1.35
TARDBP-220ENST00000618606 ITGB5P18084 799 aa6.59□□□□□ -1.35
TARDBP-220ENST00000618606 MAP4P27816 1152 aaKnown RBP6.59□□□□□ -1.35
TARDBP-220ENST00000618606 FDX2Q6P4F2 183 aa6.59□□□□□ -1.35
TARDBP-220ENST00000618606 POP1Q99575 1024 aaKnown RBP6.59□□□□□ -1.35
TARDBP-220ENST00000618606 RUSC1Q9BVN2 902 aa6.59□□□□□ -1.35
TARDBP-220ENST00000618606 ZMIZ1Q9ULJ6 1067 aa6.59□□□□□ -1.35
TARDBP-220ENST00000618606 FNDC3AQ9Y2H6 1198 aaKnown RBP6.59□□□□□ -1.35
TARDBP-220ENST00000618606 JUNBP17275 347 aaPredicted RBP6.58□□□□□ -1.36
TARDBP-220ENST00000618606 FAM26DQ5JW98 314 aa6.58□□□□□ -1.36
TARDBP-220ENST00000618606 C16orf46Q6P387 395 aa6.58□□□□□ -1.36
TARDBP-220ENST00000618606 NFXL1Q6ZNB6 911 aa6.58□□□□□ -1.36
TARDBP-220ENST00000618606 VSIG10LQ86VR7 867 aa6.58□□□□□ -1.36
TARDBP-220ENST00000618606 KRTAP4-2Q9BYR5 136 aa6.58□□□□□ -1.36
TARDBP-220ENST00000618606 SAP130Q9H0E3 1048 aa6.58□□□□□ -1.36
TARDBP-220ENST00000618606 ABI2Q9NYB9 513 aaPredicted RBP6.58□□□□□ -1.36
TARDBP-220ENST00000618606 GAS2O43903 313 aaKnown RBP6.57□□□□□ -1.36
TARDBP-220ENST00000618606 PRMT3O60678 531 aa6.57□□□□□ -1.36
TARDBP-220ENST00000618606 CABP4P57796 275 aa6.57□□□□□ -1.36
TARDBP-220ENST00000618606 OSBPL1AQ9BXW6 950 aa6.57□□□□□ -1.36
TARDBP-220ENST00000618606 ZMYND15Q9H091 742 aa6.57□□□□□ -1.36
TARDBP-220ENST00000618606 NLRP12P59046 1061 aa6.56□□□□□ -1.36
TARDBP-220ENST00000618606 NCAPG2Q86XI2 1143 aa6.56□□□□□ -1.36
TARDBP-220ENST00000618606 FBXL6Q8N531 539 aa6.56□□□□□ -1.36
TARDBP-220ENST00000618606 TNFRSF10BO14763 440 aa6.55□□□□□ -1.36
TARDBP-220ENST00000618606 ATG7O95352 703 aa6.55□□□□□ -1.36
TARDBP-220ENST00000618606 CYP2E1P05181 493 aaPredicted RBP6.55□□□□□ -1.36
TARDBP-220ENST00000618606 COL19A1Q14993 1142 aa6.55□□□□□ -1.36
TARDBP-220ENST00000618606 SGO2Q562F6 1265 aa6.55□□□□□ -1.36
TARDBP-220ENST00000618606 TP53INP2Q8IXH6 220 aa6.55□□□□□ -1.36
TARDBP-220ENST00000618606 METTL22Q9BUU2 404 aaPredicted RBP6.55□□□□□ -1.36
TARDBP-220ENST00000618606 ZAP70P43403 619 aa6.54□□□□□ -1.36
TARDBP-220ENST00000618606 CAPN12Q6ZSI9 719 aa6.54□□□□□ -1.36
TARDBP-220ENST00000618606 STK32AQ8WU08 396 aa6.54□□□□□ -1.36
TARDBP-220ENST00000618606 BSDC1Q9NW68 430 aaPredicted RBP6.54□□□□□ -1.36
TARDBP-220ENST00000618606 CXXC1Q9P0U4 656 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms