RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.17□□□□□ -1.58
SEC22B-202ENST00000618538 ZNF609O15014 1411 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 KIF1AQ12756 1690 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 PKD1L3Q7Z443 1732 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 ECM2O94769 699 aaPredicted RBP5.17□□□□□ -1.58
SEC22B-202ENST00000618538 CASP7P55210 303 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 PTPN12Q05209 780 aaKnown RBP5.17□□□□□ -1.58
SEC22B-202ENST00000618538 GIMAP6Q6P9H5 292 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 COPS6Q7L5N1 327 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 TTC6Q86TZ1 520 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 CABLES1Q8TDN4 633 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 ZNF830Q96NB3 372 aaPredicted RBP5.17□□□□□ -1.58
SEC22B-202ENST00000618538 MYD88Q99836 296 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 SMC3Q9UQE7 1217 aa5.17□□□□□ -1.58
SEC22B-202ENST00000618538 AFDNP55196 1824 aaKnown RBP5.17□□□□□ -1.58
SEC22B-202ENST00000618538 A0A0G2JLW4 131 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 MSNP26038 577 aaKnown RBP5.16□□□□□ -1.58
SEC22B-202ENST00000618538 UBE2HP62256 183 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 INSM1Q01101 510 aaPredicted RBP5.16□□□□□ -1.58
SEC22B-202ENST00000618538 TFCP2Q12800 502 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 TJAP1Q5JTD0 557 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 CCDC183Q5T5S1 534 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 CCDC129Q6ZRS4 1044 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 FERMT3Q86UX7 667 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 ERC1Q8IUD2 1116 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 C17orf53Q8N3J3 647 aaPredicted RBP5.16□□□□□ -1.58
SEC22B-202ENST00000618538 UBE2Q2Q8WVN8 375 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 ANP32BQ92688 251 aaKnown RBP5.16□□□□□ -1.58
SEC22B-202ENST00000618538 SEC62Q99442 399 aaKnown RBP5.16□□□□□ -1.58
SEC22B-202ENST00000618538 METTL22Q9BUU2 404 aaPredicted RBP5.16□□□□□ -1.58
SEC22B-202ENST00000618538 KIAA1468Q9P260 1216 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 CYP46A1Q9Y6A2 500 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 LAMB4A4D0S4 1761 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 ABCC6O95255 1503 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 NUP188Q5SRE5 1749 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 VPS37CA5D8V6 355 aaPredicted RBP5.16□□□□□ -1.58
SEC22B-202ENST00000618538 JAK2O60674 1132 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 TAF5LO75529 589 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 PHF14O94880 888 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 LIG1P18858 919 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 RPS6KB1P23443 525 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 CHRNA2Q15822 529 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 RABL6Q3YEC7 729 aaPredicted RBP5.16□□□□□ -1.58
SEC22B-202ENST00000618538 PPP1R15BQ5SWA1 713 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 STOX1Q6ZVD7 989 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 RIC3Q7Z5B4 369 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 RUFY2Q8WXA3 655 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 UPF1Q92900 1129 aaKnown RBP eCLIP5.16□□□□□ -1.58
SEC22B-202ENST00000618538 EPAS1Q99814 870 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 FSD1Q9BTV5 496 aa5.16□□□□□ -1.58
SEC22B-202ENST00000618538 R3HCC1Q9Y3T6 440 aaKnown RBP5.16□□□□□ -1.58
SEC22B-202ENST00000618538 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.16□□□□□ -1.58
SEC22B-202ENST00000618538 LAMA4Q16363 1823 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 NBPF26B4DH59 902 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 ATP5J2-PTCD1G3V325 749 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 PTCD1O75127 700 aaKnown RBP5.15□□□□□ -1.58
SEC22B-202ENST00000618538 TPM2P07951 284 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 PPP4CP60510 307 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 TNNI3KQ59H18 835 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 NBPF14Q5TI25 921 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 USPL1Q5W0Q7 1092 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 NBPF10Q6P3W6 841 aaKnown RBP5.15□□□□□ -1.58
SEC22B-202ENST00000618538 LARP1Q6PKG0 1096 aaKnown RBP5.15□□□□□ -1.58
SEC22B-202ENST00000618538 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.15□□□□□ -1.58
SEC22B-202ENST00000618538 UBE3BQ7Z3V4 1068 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 NBPF15Q8N660 670 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 GPATCH3Q96I76 525 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 DBNDD2Q9BQY9 259 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 CRISPLD2Q9H0B8 497 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 COPRSQ9NQ92 184 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 SH2B1Q9NRF2 756 aaPredicted RBP5.15□□□□□ -1.58
SEC22B-202ENST00000618538 NLRP2Q9NX02 1062 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 CCDC39Q9UFE4 941 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 FPGT-TNNI3KV9GXZ4 949 aa5.15□□□□□ -1.58
SEC22B-202ENST00000618538 PARP4Q9UKK3 1724 aaKnown RBP5.15□□□□□ -1.58
SEC22B-202ENST00000618538 ADCY5O95622 1261 aa5.15□□□□□ -1.59
SEC22B-202ENST00000618538 STK3Q13188 491 aa5.15□□□□□ -1.59
SEC22B-202ENST00000618538 G3BP1Q13283 466 aaKnown RBP eCLIP5.15□□□□□ -1.59
SEC22B-202ENST00000618538 PPP1R18Q6NYC8 613 aa5.15□□□□□ -1.59
SEC22B-202ENST00000618538 ATG9AQ7Z3C6 839 aa5.15□□□□□ -1.59
SEC22B-202ENST00000618538 SYAP1Q96A49 352 aaPredicted RBP5.15□□□□□ -1.59
SEC22B-202ENST00000618538 ZSCAN31Q96LW9 406 aaPredicted RBP5.15□□□□□ -1.59
SEC22B-202ENST00000618538 KCNF1Q9H3M0 494 aa5.15□□□□□ -1.59
SEC22B-202ENST00000618538 TTC12Q9H892 705 aaPredicted RBP5.15□□□□□ -1.59
SEC22B-202ENST00000618538 KCPQ6ZWJ8 1503 aa5.15□□□□□ -1.59
SEC22B-202ENST00000618538 UBR2Q8IWV8 1755 aa5.15□□□□□ -1.59
SEC22B-202ENST00000618538 SHANK3Q9BYB0 1731 aa5.14□□□□□ -1.59
SEC22B-202ENST00000618538 RRP9O43818 475 aaKnown RBP5.14□□□□□ -1.59
SEC22B-202ENST00000618538 DDX58O95786 925 aaKnown RBP5.14□□□□□ -1.59
SEC22B-202ENST00000618538 CYP21A2P08686 494 aa5.14□□□□□ -1.59
SEC22B-202ENST00000618538 ATP5JP18859 108 aa5.14□□□□□ -1.59
SEC22B-202ENST00000618538 MCM5P33992 734 aa5.14□□□□□ -1.59
SEC22B-202ENST00000618538 PRR20EP86478 221 aa5.14□□□□□ -1.59
SEC22B-202ENST00000618538 PRR20CP86479 221 aa5.14□□□□□ -1.59
SEC22B-202ENST00000618538 PRR20DP86480 221 aa5.14□□□□□ -1.59
SEC22B-202ENST00000618538 PRR20BP86481 221 aa5.14□□□□□ -1.59
SEC22B-202ENST00000618538 PRR20AP86496 221 aa5.14□□□□□ -1.59
SEC22B-202ENST00000618538 RBM10P98175 930 aaKnown RBP5.14□□□□□ -1.59
SEC22B-202ENST00000618538 FOXO4P98177 505 aa5.14□□□□□ -1.59
SEC22B-202ENST00000618538 TSGA10IPQ3SY00 556 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms