RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 LTV1Q96GA3 475 aaPredicted RBP9.34□□□□□ -0.91
CHD7-212ENST00000618450 CLIP2Q9UDT6 1046 aa9.34□□□□□ -0.91
CHD7-212ENST00000618450 EID1Q9Y6B2 187 aa9.34□□□□□ -0.91
CHD7-212ENST00000618450 KCNH5Q8NCM2 988 aa9.34□□□□□ -0.91
CHD7-212ENST00000618450 C16orf45Q96MC5 204 aaPredicted RBP9.34□□□□□ -0.91
CHD7-212ENST00000618450 DSCC1Q9BVC3 393 aa9.34□□□□□ -0.91
CHD7-212ENST00000618450 XIRP1Q702N8 1843 aaKnown RBP9.34□□□□□ -0.91
CHD7-212ENST00000618450 BCL9LQ86UU0 1499 aa9.34□□□□□ -0.91
CHD7-212ENST00000618450 PDIA3P30101 505 aaKnown RBP9.34□□□□□ -0.91
CHD7-212ENST00000618450 ZMYM1Q5SVZ6 1142 aa9.34□□□□□ -0.91
CHD7-212ENST00000618450 TRIM65Q6PJ69 517 aa9.34□□□□□ -0.91
CHD7-212ENST00000618450 NBPF3Q9H094 633 aa9.34□□□□□ -0.91
CHD7-212ENST00000618450 SLC52A2Q9HAB3 445 aa9.34□□□□□ -0.91
CHD7-212ENST00000618450 RTEL1Q9NZ71 1219 aa9.34□□□□□ -0.91
CHD7-212ENST00000618450 ZHX1Q9UKY1 873 aaPredicted RBP9.34□□□□□ -0.91
CHD7-212ENST00000618450 MYH3P11055 1940 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 TNNT1P13805 278 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 KRT32Q14532 448 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 PLEKHO1Q53GL0 409 aaPredicted RBP9.33□□□□□ -0.92
CHD7-212ENST00000618450 KBTBD3Q8NAB2 608 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 GPATCH3Q96I76 525 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 C9orf78Q9NZ63 289 aaPredicted RBP9.33□□□□□ -0.92
CHD7-212ENST00000618450 ABCA3Q99758 1704 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 ZRANB2O95218 330 aaKnown RBP eCLIP9.33□□□□□ -0.92
CHD7-212ENST00000618450 MCMDC2Q4G0Z9 681 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 ZNF274Q96GC6 653 aaPredicted RBP9.33□□□□□ -0.92
CHD7-212ENST00000618450 TNS2Q63HR2 1409 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 A0A1W2PQ27 194 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 A0A1W2PQ64 194 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 A0A1W2PQD8 194 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 GOLGA6L6A8MZA4 724 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 H7C1W4 665 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 ADRA2BP18089 450 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 DBNDD2Q9BQY9 259 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 PCDHA7Q9UN72 937 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 A0A1B0GUL6 1792 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 DLEC1Q9Y238 1755 aa9.33□□□□□ -0.92
CHD7-212ENST00000618450 ZBTB7CA1YPR0 619 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 FAM160A1Q05DH4 1040 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 THEMISQ8N1K5 641 aaPredicted RBP9.32□□□□□ -0.92
CHD7-212ENST00000618450 LINC00301Q8NCQ3 95 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 GPR108Q9NPR9 543 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 ZNF215Q9UL58 517 aaPredicted RBP9.32□□□□□ -0.92
CHD7-212ENST00000618450 HPSEQ9Y251 543 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 FHOD1Q9Y613 1164 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 ATRNO75882 1429 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 RNF20Q5VTR2 975 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 FBXO38Q6PIJ6 1188 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 DHX32Q7L7V1 743 aaKnown RBP9.32□□□□□ -0.92
CHD7-212ENST00000618450 U3KPZ7 1027 aaPredicted RBP9.32□□□□□ -0.92
CHD7-212ENST00000618450 STK3Q13188 491 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 CTAGE5O15320 804 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 NEMFO60524 1076 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 GABPB1Q06547 395 aaPredicted RBP9.32□□□□□ -0.92
CHD7-212ENST00000618450 TERF2Q15554 542 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 DNTTIP2Q5QJE6 756 aaKnown RBP9.32□□□□□ -0.92
CHD7-212ENST00000618450 CEP135Q66GS9 1140 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 ADALQ6DHV7 355 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 FSD1Q9BTV5 496 aa9.32□□□□□ -0.92
CHD7-212ENST00000618450 E7EWF7 191 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 HSPD1P10809 573 aaKnown RBP9.31□□□□□ -0.92
CHD7-212ENST00000618450 PHKG2P15735 406 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 STX1AQ16623 288 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 ANKRD24Q8TF21 1146 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 HELLSQ9NRZ9 838 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 TUBE1Q9UJT0 475 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 MROH7-TTC4A0A0A0MT08 1334 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 CASZ1Q86V15 1759 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 MAST3O60307 1309 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 PTPDC1A2A3K4 754 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 ANTXR2P58335 489 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 CCAR1Q8IX12 1150 aaKnown RBP9.31□□□□□ -0.92
CHD7-212ENST00000618450 XAGE3Q8WTP9 111 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.31□□□□□ -0.92
CHD7-212ENST00000618450 IMPACTQ9P2X3 320 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 CFAP45Q9UL16 551 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 CHMP3Q9Y3E7 222 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 SLIT2O94813 1529 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 NDUFA8P51970 172 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 TEFQ10587 303 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 G3BP1Q13283 466 aaKnown RBP eCLIP9.31□□□□□ -0.929e-7■□□□□ 8
CHD7-212ENST00000618450 ZNF496Q96IT1 587 aaPredicted RBP9.31□□□□□ -0.92
CHD7-212ENST00000618450 ARID3AQ99856 593 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 TRIM5Q9C035 493 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 SIL1Q9H173 461 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 INTS13Q9NVM9 706 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 POLR3EQ9NVU0 708 aa9.31□□□□□ -0.92
CHD7-212ENST00000618450 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.31□□□□□ -0.922e-6■■■■□ 22.8
CHD7-212ENST00000618450 KIF28PB7ZC32 967 aa9.3□□□□□ -0.92
CHD7-212ENST00000618450 MDM2Q00987 491 aaPredicted RBP9.3□□□□□ -0.92
CHD7-212ENST00000618450 DPCR1Q3MIW9 517 aa9.3□□□□□ -0.92
CHD7-212ENST00000618450 COPS6Q7L5N1 327 aa9.3□□□□□ -0.92
CHD7-212ENST00000618450 CGNQ9P2M7 1197 aaKnown RBP9.3□□□□□ -0.92
CHD7-212ENST00000618450 PLCH1Q4KWH8 1693 aa9.3□□□□□ -0.92
CHD7-212ENST00000618450 NID2Q14112 1375 aa9.3□□□□□ -0.92
CHD7-212ENST00000618450 NBPF26B4DH59 902 aa9.3□□□□□ -0.92
CHD7-212ENST00000618450 NBPF14Q5TI25 921 aa9.3□□□□□ -0.92
CHD7-212ENST00000618450 NBPF10Q6P3W6 841 aaKnown RBP9.3□□□□□ -0.92
CHD7-212ENST00000618450 NBPF15Q8N660 670 aa9.3□□□□□ -0.92
CHD7-212ENST00000618450 MAP3K14Q99558 947 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms