RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 BCL11BQ9C0K0 894 aaPredicted RBP14.74□□□□□ -0.05
CIITA-212ENST00000618207 RBSNQ9H1K0 784 aa14.74□□□□□ -0.05
CIITA-212ENST00000618207 NUP98P52948 1817 aa14.74□□□□□ -0.05
CIITA-212ENST00000618207 PDE8AO60658 829 aa14.74□□□□□ -0.05
CIITA-212ENST00000618207 PTF1AQ7RTS3 328 aa14.74□□□□□ -0.05
CIITA-212ENST00000618207 NGLY1Q96IV0 654 aa14.74□□□□□ -0.05
CIITA-212ENST00000618207 PUS7LQ9H0K6 701 aaKnown RBP14.74□□□□□ -0.05
CIITA-212ENST00000618207 SH3TC1Q8TE82 1336 aa14.74□□□□□ -0.05
CIITA-212ENST00000618207 APOBRQ0VD83 1088 aa14.73□□□□□ -0.05
CIITA-212ENST00000618207 RAB11FIP4Q86YS3 637 aa14.73□□□□□ -0.05
CIITA-212ENST00000618207 PLA2G12BQ9BX93 195 aa14.73□□□□□ -0.05
CIITA-212ENST00000618207 HELLSQ9NRZ9 838 aa14.73□□□□□ -0.05
CIITA-212ENST00000618207 NIP7Q9Y221 180 aaKnown RBP eCLIP14.73□□□□□ -0.05
CIITA-212ENST00000618207 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
CIITA-212ENST00000618207 PHKA1P46020 1223 aa14.73□□□□□ -0.05
CIITA-212ENST00000618207 EIF5P55010 431 aaKnown RBP14.73□□□□□ -0.05
CIITA-212ENST00000618207 KRT32Q14532 448 aa14.73□□□□□ -0.05
CIITA-212ENST00000618207 ANKRD1Q15327 319 aa14.73□□□□□ -0.05
CIITA-212ENST00000618207 GPHNQ9NQX3 736 aaPredicted RBP14.72□□□□□ -0.05
CIITA-212ENST00000618207 MBD3O95983 291 aa14.72□□□□□ -0.05
CIITA-212ENST00000618207 NCOA5Q9HCD5 579 aaKnown RBP14.72□□□□□ -0.05
CIITA-212ENST00000618207 RRAGDQ9NQL2 400 aaPredicted RBP14.72□□□□□ -0.05
CIITA-212ENST00000618207 TFIP11Q9UBB9 837 aaKnown RBP14.72□□□□□ -0.05
CIITA-212ENST00000618207 CDHR2Q9BYE9 1310 aa14.71□□□□□ -0.05
CIITA-212ENST00000618207 E7EWF7 191 aa14.71□□□□□ -0.05
CIITA-212ENST00000618207 ZNF445P59923 1031 aa14.71□□□□□ -0.05
CIITA-212ENST00000618207 ZNF34Q8IZ26 560 aa14.71□□□□□ -0.05
CIITA-212ENST00000618207 MPHOSPH8Q99549 860 aa14.71□□□□□ -0.05
CIITA-212ENST00000618207 IQSEC3Q9UPP2 1182 aaPredicted RBP14.71□□□□□ -0.05
CIITA-212ENST00000618207 PHLPP1O60346 1717 aa14.71□□□□□ -0.05
CIITA-212ENST00000618207 PDE8BO95263 885 aa14.71□□□□□ -0.05
CIITA-212ENST00000618207 RIC1Q4ADV7 1423 aa14.71□□□□□ -0.06
CIITA-212ENST00000618207 JCADQ9P266 1359 aa14.71□□□□□ -0.06
CIITA-212ENST00000618207 SPATA31A5Q5VU36 1347 aa14.71□□□□□ -0.06
CIITA-212ENST00000618207 SPATA31A7Q8IWB4 1347 aa14.71□□□□□ -0.06
CIITA-212ENST00000618207 UBAP1LF5GYI3 381 aa14.7□□□□□ -0.06
CIITA-212ENST00000618207 APPP05067 770 aa14.7□□□□□ -0.06
CIITA-212ENST00000618207 TSGA10IPQ3SY00 556 aa14.7□□□□□ -0.06
CIITA-212ENST00000618207 SLC9C2Q5TAH2 1124 aa14.7□□□□□ -0.06
CIITA-212ENST00000618207 CCDC24Q8N4L8 307 aa14.7□□□□□ -0.06
CIITA-212ENST00000618207 TRIM44Q96DX7 344 aaPredicted RBP14.7□□□□□ -0.06
CIITA-212ENST00000618207 ERVV-1B6SEH8 477 aa14.7□□□□□ -0.06
CIITA-212ENST00000618207 DSCC1Q9BVC3 393 aa14.7□□□□□ -0.06
CIITA-212ENST00000618207 ISY1Q9ULR0 285 aaKnown RBP14.7□□□□□ -0.06
CIITA-212ENST00000618207 PLCH1Q4KWH8 1693 aa14.7□□□□□ -0.06
CIITA-212ENST00000618207 MYH14Q7Z406 1995 aaKnown RBP14.7□□□□□ -0.06
CIITA-212ENST00000618207 LRP6O75581 1613 aa14.7□□□□□ -0.06
CIITA-212ENST00000618207 SCRN1Q12765 414 aa14.7□□□□□ -0.06
CIITA-212ENST00000618207 CCDC102BQ68D86 513 aa14.7□□□□□ -0.06
CIITA-212ENST00000618207 ANP32BQ92688 251 aaKnown RBP14.7□□□□□ -0.06
CIITA-212ENST00000618207 UTP14AQ9BVJ6 771 aaKnown RBP14.7□□□□□ -0.06
CIITA-212ENST00000618207 ATP6V1DQ9Y5K8 247 aa14.7□□□□□ -0.06
CIITA-212ENST00000618207 TOM1O60784 492 aa14.69□□□□□ -0.06
CIITA-212ENST00000618207 FGAP02671 866 aa14.69□□□□□ -0.06
CIITA-212ENST00000618207 DHX32Q7L7V1 743 aaKnown RBP14.69□□□□□ -0.06
CIITA-212ENST00000618207 CDCA7Q9BWT1 371 aaPredicted RBP14.69□□□□□ -0.06
CIITA-212ENST00000618207 AHDC1Q5TGY3 1603 aaPredicted RBP14.69□□□□□ -0.06
CIITA-212ENST00000618207 MYO5AQ9Y4I1 1855 aaKnown RBP14.69□□□□□ -0.06
CIITA-212ENST00000618207 GPAA1O43292 621 aa14.69□□□□□ -0.06
CIITA-212ENST00000618207 CEBPZQ03701 1054 aaKnown RBP14.69□□□□□ -0.06
CIITA-212ENST00000618207 LRSAM1Q6UWE0 723 aa14.69□□□□□ -0.06
CIITA-212ENST00000618207 STK11IPQ8N1F8 1099 aa14.69□□□□□ -0.06
CIITA-212ENST00000618207 GTF3C6Q969F1 213 aa14.69□□□□□ -0.06
CIITA-212ENST00000618207 PIH1D3Q9NQM4 214 aaKnown RBP14.69□□□□□ -0.06
CIITA-212ENST00000618207 DENND2AQ9ULE3 1009 aa14.69□□□□□ -0.06
CIITA-212ENST00000618207 WTIPA6NIX2 430 aaPredicted RBP14.68□□□□□ -0.06
CIITA-212ENST00000618207 CAMTA2O94983 1202 aa14.68□□□□□ -0.06
CIITA-212ENST00000618207 GUCY1B3Q02153 619 aa14.68□□□□□ -0.06
CIITA-212ENST00000618207 AEBP2Q6ZN18 517 aaPredicted RBP14.68□□□□□ -0.06
CIITA-212ENST00000618207 FAM184AQ8NB25 1140 aa14.68□□□□□ -0.06
CIITA-212ENST00000618207 THRAP3Q9Y2W1 955 aaKnown RBP14.68□□□□□ -0.06
CIITA-212ENST00000618207 RFX7Q2KHR2 1363 aa14.68□□□□□ -0.06
CIITA-212ENST00000618207 MYH3P11055 1940 aa14.68□□□□□ -0.06
CIITA-212ENST00000618207 VGLL2Q8N8G2 317 aa14.68□□□□□ -0.06
CIITA-212ENST00000618207 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
CIITA-212ENST00000618207 SLIT2O94813 1529 aa14.67□□□□□ -0.06
CIITA-212ENST00000618207 H3BQV1 296 aa14.67□□□□□ -0.06
CIITA-212ENST00000618207 FOXP2O15409 715 aa14.67□□□□□ -0.06
CIITA-212ENST00000618207 IFFO2Q5TF58 517 aa14.67□□□□□ -0.06
CIITA-212ENST00000618207 APPBP2Q92624 585 aa14.67□□□□□ -0.06
CIITA-212ENST00000618207 WWC3Q9ULE0 1092 aa14.67□□□□□ -0.06
CIITA-212ENST00000618207 KDM4AO75164 1064 aa14.67□□□□□ -0.06
CIITA-212ENST00000618207 GTF2E1P29083 439 aaPredicted RBP14.67□□□□□ -0.06
CIITA-212ENST00000618207 LAMA4Q16363 1823 aa14.67□□□□□ -0.06
CIITA-212ENST00000618207 BCAMP50895 628 aa14.66□□□□□ -0.06
CIITA-212ENST00000618207 IMMTQ16891 758 aaKnown RBP14.66□□□□□ -0.06
CIITA-212ENST00000618207 SYAP1Q96A49 352 aaPredicted RBP14.66□□□□□ -0.06
CIITA-212ENST00000618207 ZNF532Q9HCE3 1301 aa14.66□□□□□ -0.06
CIITA-212ENST00000618207 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.65□□□□□ -0.06
CIITA-212ENST00000618207 PDCP20941 246 aa14.65□□□□□ -0.06
CIITA-212ENST00000618207 LRRFIP1Q32MZ4 808 aaKnown RBP14.65□□□□□ -0.06
CIITA-212ENST00000618207 TTC6Q86TZ1 520 aa14.65□□□□□ -0.06
CIITA-212ENST00000618207 FAM43AQ8N2R8 423 aa14.65□□□□□ -0.06
CIITA-212ENST00000618207 LINC00116Q8NCU8 138 aa14.65□□□□□ -0.06
CIITA-212ENST00000618207 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.65□□□□□ -0.06
CIITA-212ENST00000618207 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.65□□□□□ -0.06
CIITA-212ENST00000618207 INCENPQ9NQS7 918 aa14.65□□□□□ -0.06
CIITA-212ENST00000618207 UBE2HP62256 183 aa14.65□□□□□ -0.06
CIITA-212ENST00000618207 PUM3Q15397 648 aaKnown RBP14.65□□□□□ -0.06
CIITA-212ENST00000618207 GIMAP6Q6P9H5 292 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms