RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 MTRQ99707 1265 aa9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 BCL2L13Q9BXK5 485 aa9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 CNOT7Q9UIV1 285 aaKnown RBP9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 PTPN22Q9Y2R2 807 aa9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 ASTN2O75129 1339 aaPredicted RBP9.62□□□□□ -0.87
SCAMP1-206ENST00000618166 WASHC2AQ641Q2 1341 aa9.62□□□□□ -0.87
SCAMP1-206ENST00000618166 A0A087WZG4 1122 aa9.62□□□□□ -0.87
SCAMP1-206ENST00000618166 FAM177BA6PVY3 158 aa9.62□□□□□ -0.87
SCAMP1-206ENST00000618166 EIF4A2Q14240 407 aaKnown RBP9.62□□□□□ -0.87
SCAMP1-206ENST00000618166 TBC1D10BQ4KMP7 808 aaPredicted RBP9.62□□□□□ -0.87
SCAMP1-206ENST00000618166 PLEKHO1Q53GL0 409 aaPredicted RBP9.62□□□□□ -0.87
SCAMP1-206ENST00000618166 PACS2Q86VP3 889 aa9.62□□□□□ -0.87
SCAMP1-206ENST00000618166 PRUNE2Q8WUY3 3088 aa9.62□□□□□ -0.87
SCAMP1-206ENST00000618166 L3MBTL2Q969R5 705 aa9.62□□□□□ -0.87
SCAMP1-206ENST00000618166 TM4SF4P48230 202 aa9.61□□□□□ -0.87
SCAMP1-206ENST00000618166 ZNF333Q96JL9 665 aa9.61□□□□□ -0.87
SCAMP1-206ENST00000618166 LGR6Q9HBX8 967 aa9.61□□□□□ -0.87
SCAMP1-206ENST00000618166 ALDH1B1P30837 517 aa9.6□□□□□ -0.87
SCAMP1-206ENST00000618166 FAM122AQ96E09 287 aa9.6□□□□□ -0.87
SCAMP1-206ENST00000618166 CDCA5Q96FF9 252 aa9.6□□□□□ -0.87
SCAMP1-206ENST00000618166 SLC52A2Q9HAB3 445 aa9.6□□□□□ -0.87
SCAMP1-206ENST00000618166 MTMR10Q9NXD2 777 aa9.6□□□□□ -0.87
SCAMP1-206ENST00000618166 ZNRF3Q9ULT6 936 aa9.6□□□□□ -0.87
SCAMP1-206ENST00000618166 GTPBP6O43824 516 aaPredicted RBP9.59□□□□□ -0.87
SCAMP1-206ENST00000618166 C1orf141Q5JVX7 400 aa9.59□□□□□ -0.87
SCAMP1-206ENST00000618166 RBM26Q5T8P6 1007 aaKnown RBP9.59□□□□□ -0.87
SCAMP1-206ENST00000618166 AEBP1Q8IUX7 1158 aa9.59□□□□□ -0.87
SCAMP1-206ENST00000618166 CD99L2Q8TCZ2 262 aa9.59□□□□□ -0.87
SCAMP1-206ENST00000618166 CDHR2Q9BYE9 1310 aa9.58□□□□□ -0.88
SCAMP1-206ENST00000618166 UBE2Q2LH0YL09 131 aa9.58□□□□□ -0.88
SCAMP1-206ENST00000618166 PIP4K2AP48426 406 aaPredicted RBP9.58□□□□□ -0.88
SCAMP1-206ENST00000618166 SLC4A8Q2Y0W8 1093 aa9.58□□□□□ -0.88
SCAMP1-206ENST00000618166 DCPSQ96C86 337 aaKnown RBP9.58□□□□□ -0.88
SCAMP1-206ENST00000618166 CFHR5Q9BXR6 569 aa9.58□□□□□ -0.88
SCAMP1-206ENST00000618166 SCAF8Q9UPN6 1271 aaKnown RBP9.58□□□□□ -0.88
SCAMP1-206ENST00000618166 ZNF609O15014 1411 aa9.57□□□□□ -0.88
SCAMP1-206ENST00000618166 ABCC12Q96J65 1359 aa9.57□□□□□ -0.88
SCAMP1-206ENST00000618166 PRAMEF22A3QJZ6 481 aa9.57□□□□□ -0.88
SCAMP1-206ENST00000618166 YDJCA8MPS7 323 aa9.57□□□□□ -0.88
SCAMP1-206ENST00000618166 H7C1D1 291 aa9.57□□□□□ -0.88
SCAMP1-206ENST00000618166 A1BGP04217 495 aa9.57□□□□□ -0.88
SCAMP1-206ENST00000618166 ZNF516Q92618 1163 aa9.57□□□□□ -0.88
SCAMP1-206ENST00000618166 SHISA4Q96DD7 197 aa9.57□□□□□ -0.88
SCAMP1-206ENST00000618166 GGA3Q9NZ52 723 aa9.57□□□□□ -0.88
SCAMP1-206ENST00000618166 STAP2Q9UGK3 403 aa9.57□□□□□ -0.88
SCAMP1-206ENST00000618166 KIF20BQ96Q89 1820 aa9.57□□□□□ -0.88
SCAMP1-206ENST00000618166 LAMA2P24043 3122 aaKnown RBP9.57□□□□□ -0.88
SCAMP1-206ENST00000618166 TNNT2P45379 298 aaPredicted RBP9.56□□□□□ -0.88
SCAMP1-206ENST00000618166 CAMK2BQ13554 666 aa9.56□□□□□ -0.88
SCAMP1-206ENST00000618166 CRY2Q49AN0 593 aa9.56□□□□□ -0.88
SCAMP1-206ENST00000618166 AMOTQ4VCS5 1084 aa9.56□□□□□ -0.88
SCAMP1-206ENST00000618166 CC2D2BQ6DHV5 1058 aa9.56□□□□□ -0.88
SCAMP1-206ENST00000618166 DZIP3Q86Y13 1208 aaKnown RBP9.56□□□□□ -0.88
SCAMP1-206ENST00000618166 VSIG10Q8N0Z9 540 aa9.56□□□□□ -0.88
SCAMP1-206ENST00000618166 PUS7Q96PZ0 661 aaKnown RBP9.56□□□□□ -0.88
SCAMP1-206ENST00000618166 POLKQ9UBT6 870 aa9.56□□□□□ -0.88
SCAMP1-206ENST00000618166 A0A1W2PPC1 479 aa9.55□□□□□ -0.88
SCAMP1-206ENST00000618166 PPEF1O14829 653 aaPredicted RBP9.55□□□□□ -0.88
SCAMP1-206ENST00000618166 ZBTB7BO15156 539 aaPredicted RBP9.55□□□□□ -0.88
SCAMP1-206ENST00000618166 STARD3NLO95772 234 aa9.55□□□□□ -0.88
SCAMP1-206ENST00000618166 IL6STP40189 918 aaPredicted RBP9.55□□□□□ -0.88
SCAMP1-206ENST00000618166 POLR2AP24928 1970 aaKnown RBP9.54□□□□□ -0.88
SCAMP1-206ENST00000618166 TNIP1Q15025 636 aa9.54□□□□□ -0.88
SCAMP1-206ENST00000618166 PRAMEF18Q5VWM3 479 aa9.54□□□□□ -0.88
SCAMP1-206ENST00000618166 TPTE2Q6XPS3 522 aa9.54□□□□□ -0.88
SCAMP1-206ENST00000618166 NUTM1Q86Y26 1132 aa9.54□□□□□ -0.88
SCAMP1-206ENST00000618166 SULF1Q8IWU6 871 aa9.54□□□□□ -0.88
SCAMP1-206ENST00000618166 SNX27Q96L92 541 aa9.54□□□□□ -0.88
SCAMP1-206ENST00000618166 EFCC1Q9HA90 598 aa9.54□□□□□ -0.88
SCAMP1-206ENST00000618166 PTCH2Q9Y6C5 1203 aa9.54□□□□□ -0.88
SCAMP1-206ENST00000618166 SLC9C1Q4G0N8 1177 aa9.53□□□□□ -0.88
SCAMP1-206ENST00000618166 SH3TC2Q8TF17 1288 aa9.53□□□□□ -0.88
SCAMP1-206ENST00000618166 NIP7Q9Y221 180 aaKnown RBP eCLIP9.53□□□□□ -0.88
SCAMP1-206ENST00000618166 UBR2Q8IWV8 1755 aa9.53□□□□□ -0.88
SCAMP1-206ENST00000618166 TTC28Q96AY4 2481 aa9.53□□□□□ -0.88
SCAMP1-206ENST00000618166 PSMD14O00487 310 aa9.52□□□□□ -0.88
SCAMP1-206ENST00000618166 DPYSL4O14531 572 aa9.52□□□□□ -0.88
SCAMP1-206ENST00000618166 RNMTO43148 476 aaKnown RBP9.52□□□□□ -0.88
SCAMP1-206ENST00000618166 SREBF2Q12772 1141 aa9.52□□□□□ -0.88
SCAMP1-206ENST00000618166 KIF4BQ2VIQ3 1234 aa9.52□□□□□ -0.88
SCAMP1-206ENST00000618166 ZNF496Q96IT1 587 aaPredicted RBP9.52□□□□□ -0.88
SCAMP1-206ENST00000618166 GUCD1Q96NT3 240 aa9.52□□□□□ -0.88
SCAMP1-206ENST00000618166 TESK2Q96S53 571 aa9.52□□□□□ -0.88
SCAMP1-206ENST00000618166 CARD11Q9BXL7 1154 aa9.52□□□□□ -0.88
SCAMP1-206ENST00000618166 RPTORQ8N122 1335 aa9.52□□□□□ -0.89
SCAMP1-206ENST00000618166 TMEM265A0A087WTH1 108 aa9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 SMAPO00193 183 aa9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 IGF2BP3O00425 579 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 HOXA10P31260 410 aaPredicted RBP9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 FKBP1BP68106 108 aa9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 KIAA2012Q0VF49 1180 aa9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 TSR1Q2NL82 804 aaKnown RBP9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 ANGEL2Q5VTE6 544 aaKnown RBP9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 UBE2Q1Q7Z7E8 422 aa9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 NKX2-3Q8TAU0 364 aa9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 DDX12PQ92771 950 aa9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 RPGRQ92834 1020 aaKnown RBP9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 ERO1AQ96HE7 468 aa9.51□□□□□ -0.89
SCAMP1-206ENST00000618166 CARD14Q9BXL6 1004 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms