RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
CBWD1-226ENST00000618061 LOC102724428A0A0B4J2F2 783 aa16.53■□□□□ 0.24
CBWD1-226ENST00000618061 PDE8AO60658 829 aa16.53■□□□□ 0.24
CBWD1-226ENST00000618061 EIF5P55010 431 aaKnown RBP16.53■□□□□ 0.24
CBWD1-226ENST00000618061 SIK1P57059 783 aa16.53■□□□□ 0.24
CBWD1-226ENST00000618061 FGD1P98174 961 aa16.53■□□□□ 0.24
CBWD1-226ENST00000618061 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
CBWD1-226ENST00000618061 FAM43AQ8N2R8 423 aa16.53■□□□□ 0.24
CBWD1-226ENST00000618061 PUS7LQ9H0K6 701 aaKnown RBP16.53■□□□□ 0.24
CBWD1-226ENST00000618061 ALDH8A1Q9H2A2 487 aaPredicted RBP16.53■□□□□ 0.24
CBWD1-226ENST00000618061 MYO5AQ9Y4I1 1855 aaKnown RBP16.53■□□□□ 0.24
CBWD1-226ENST00000618061 FOXP2O15409 715 aa16.53■□□□□ 0.24
CBWD1-226ENST00000618061 LRSAM1Q6UWE0 723 aa16.53■□□□□ 0.24
CBWD1-226ENST00000618061 RNF214Q8ND24 703 aa16.53■□□□□ 0.24
CBWD1-226ENST00000618061 DDX11Q96FC9 970 aa16.53■□□□□ 0.24
CBWD1-226ENST00000618061 DSCC1Q9BVC3 393 aa16.53■□□□□ 0.24
CBWD1-226ENST00000618061 CCDC87Q9NVE4 849 aa16.53■□□□□ 0.24
CBWD1-226ENST00000618061 ERVV-1B6SEH8 477 aa16.52■□□□□ 0.24
CBWD1-226ENST00000618061 E7EWF7 191 aa16.52■□□□□ 0.24
CBWD1-226ENST00000618061 FOSBP53539 338 aa16.52■□□□□ 0.24
CBWD1-226ENST00000618061 APOBRQ0VD83 1088 aa16.52■□□□□ 0.24
CBWD1-226ENST00000618061 VGLL2Q8N8G2 317 aa16.52■□□□□ 0.24
CBWD1-226ENST00000618061 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.52■□□□□ 0.24
CBWD1-226ENST00000618061 SEC31BQ9NQW1 1179 aa16.52■□□□□ 0.24
CBWD1-226ENST00000618061 FBXO3Q9UK99 471 aa16.52■□□□□ 0.24
CBWD1-226ENST00000618061 MYH14Q7Z406 1995 aaKnown RBP16.52■□□□□ 0.23
CBWD1-226ENST00000618061 SPATA31A5Q5VU36 1347 aa16.52■□□□□ 0.23
CBWD1-226ENST00000618061 SPATA31A7Q8IWB4 1347 aa16.52■□□□□ 0.23
CBWD1-226ENST00000618061 GTF3C6Q969F1 213 aa16.51■□□□□ 0.23
CBWD1-226ENST00000618061 NAP1L2Q9ULW6 460 aaPredicted RBP16.51■□□□□ 0.23
CBWD1-226ENST00000618061 PHKA1P46020 1223 aa16.51■□□□□ 0.23
CBWD1-226ENST00000618061 SCRN1Q12765 414 aa16.51■□□□□ 0.23
CBWD1-226ENST00000618061 PDE8BO95263 885 aa16.5■□□□□ 0.23
CBWD1-226ENST00000618061 CCT2P78371 535 aaKnown RBP16.5■□□□□ 0.23
CBWD1-226ENST00000618061 FAM98CQ17RN3 349 aaKnown RBP16.5■□□□□ 0.23
CBWD1-226ENST00000618061 TMEM87AQ8NBN3 555 aa16.5■□□□□ 0.23
CBWD1-226ENST00000618061 GPHNQ9NQX3 736 aaPredicted RBP16.5■□□□□ 0.23
CBWD1-226ENST00000618061 THRAP3Q9Y2W1 955 aaKnown RBP16.5■□□□□ 0.23
CBWD1-226ENST00000618061 AKAP11Q9UKA4 1901 aa16.5■□□□□ 0.23
CBWD1-226ENST00000618061 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
CBWD1-226ENST00000618061 NWD2Q9ULI1 1742 aa16.5■□□□□ 0.23
CBWD1-226ENST00000618061 DHX32Q7L7V1 743 aaKnown RBP16.5■□□□□ 0.23
CBWD1-226ENST00000618061 CDCA7Q9BWT1 371 aaPredicted RBP16.5■□□□□ 0.23
CBWD1-226ENST00000618061 PTF1AQ7RTS3 328 aa16.49■□□□□ 0.23
CBWD1-226ENST00000618061 NCOA5Q9HCD5 579 aaKnown RBP16.49■□□□□ 0.23
CBWD1-226ENST00000618061 PIH1D3Q9NQM4 214 aaKnown RBP16.49■□□□□ 0.23
CBWD1-226ENST00000618061 ATP6V1DQ9Y5K8 247 aa16.49■□□□□ 0.23
CBWD1-226ENST00000618061 CAMTA2O94983 1202 aa16.48■□□□□ 0.23
CBWD1-226ENST00000618061 CCDC102BQ68D86 513 aa16.48■□□□□ 0.23
CBWD1-226ENST00000618061 TFIP11Q9UBB9 837 aaKnown RBP16.48■□□□□ 0.23
CBWD1-226ENST00000618061 IDH1O75874 414 aaKnown RBP16.48■□□□□ 0.23
CBWD1-226ENST00000618061 FGAP02671 866 aa16.48■□□□□ 0.23
CBWD1-226ENST00000618061 UBE2HP62256 183 aa16.48■□□□□ 0.23
CBWD1-226ENST00000618061 EXOSC10Q01780 885 aaKnown RBP16.48■□□□□ 0.23
CBWD1-226ENST00000618061 NIP7Q9Y221 180 aaKnown RBP eCLIP16.48■□□□□ 0.23
CBWD1-226ENST00000618061 MYH7P12883 1935 aa16.47■□□□□ 0.23
CBWD1-226ENST00000618061 GPAA1O43292 621 aa16.47■□□□□ 0.23
CBWD1-226ENST00000618061 SLC9C2Q5TAH2 1124 aa16.47■□□□□ 0.23
CBWD1-226ENST00000618061 APPBP2Q92624 585 aa16.47■□□□□ 0.23
CBWD1-226ENST00000618061 TRIM44Q96DX7 344 aaPredicted RBP16.47■□□□□ 0.23
CBWD1-226ENST00000618061 C8orf37Q96NL8 207 aa16.47■□□□□ 0.23
CBWD1-226ENST00000618061 UTP14AQ9BVJ6 771 aaKnown RBP16.47■□□□□ 0.23
CBWD1-226ENST00000618061 DENND2AQ9ULE3 1009 aa16.47■□□□□ 0.23
CBWD1-226ENST00000618061 CTDNEP1O95476 244 aa16.46■□□□□ 0.23
CBWD1-226ENST00000618061 CCDC173Q0VFZ6 552 aa16.46■□□□□ 0.23
CBWD1-226ENST00000618061 TTC6Q86TZ1 520 aa16.46■□□□□ 0.23
CBWD1-226ENST00000618061 RAB11FIP4Q86YS3 637 aa16.46■□□□□ 0.23
CBWD1-226ENST00000618061 SYAP1Q96A49 352 aaPredicted RBP16.46■□□□□ 0.23
CBWD1-226ENST00000618061 COL4A1P02462 1669 aa16.46■□□□□ 0.22
CBWD1-226ENST00000618061 HMGB1P09429 215 aaKnown RBP16.45■□□□□ 0.22
CBWD1-226ENST00000618061 FAM182BQ5T319 152 aa16.45■□□□□ 0.22
CBWD1-226ENST00000618061 ANP32BQ92688 251 aaKnown RBP16.45■□□□□ 0.22
CBWD1-226ENST00000618061 WWC3Q9ULE0 1092 aa16.45■□□□□ 0.22
CBWD1-226ENST00000618061 ZFYP08048 801 aaPredicted RBP16.45■□□□□ 0.22
CBWD1-226ENST00000618061 PDCP20941 246 aa16.45■□□□□ 0.22
CBWD1-226ENST00000618061 NKX2-3Q8TAU0 364 aa16.45■□□□□ 0.22
CBWD1-226ENST00000618061 MPHOSPH8Q99549 860 aa16.45■□□□□ 0.22
CBWD1-226ENST00000618061 TSPY26PQ9H489 355 aa16.45■□□□□ 0.22
CBWD1-226ENST00000618061 PFKFB2O60825 505 aa16.44■□□□□ 0.22
CBWD1-226ENST00000618061 ADD2P35612 726 aa16.44■□□□□ 0.22
CBWD1-226ENST00000618061 PUM3Q15397 648 aaKnown RBP16.44■□□□□ 0.22
CBWD1-226ENST00000618061 DDX60Q8IY21 1712 aaKnown RBP16.44■□□□□ 0.22
CBWD1-226ENST00000618061 PPP1R9BQ96SB3 815 aa16.44■□□□□ 0.22
CBWD1-226ENST00000618061 ZNF532Q9HCE3 1301 aa16.44■□□□□ 0.22
CBWD1-226ENST00000618061 WTIPA6NIX2 430 aaPredicted RBP16.44■□□□□ 0.22
CBWD1-226ENST00000618061 NTSR2O95665 410 aa16.44■□□□□ 0.22
CBWD1-226ENST00000618061 FGFR2P21802 821 aa16.44■□□□□ 0.22
CBWD1-226ENST00000618061 IMMTQ16891 758 aaKnown RBP16.44■□□□□ 0.22
CBWD1-226ENST00000618061 LRRFIP1Q32MZ4 808 aaKnown RBP16.44■□□□□ 0.22
CBWD1-226ENST00000618061 CCDC183Q5T5S1 534 aa16.44■□□□□ 0.22
CBWD1-226ENST00000618061 GIMAP6Q6P9H5 292 aa16.44■□□□□ 0.22
CBWD1-226ENST00000618061 BICDL1Q6ZP65 573 aa16.44■□□□□ 0.22
CBWD1-226ENST00000618061 FAM184AQ8NB25 1140 aa16.44■□□□□ 0.22
CBWD1-226ENST00000618061 LINC00116Q8NCU8 138 aa16.44■□□□□ 0.22
CBWD1-226ENST00000618061 NSUN7Q8NE18 718 aaKnown RBP16.44■□□□□ 0.22
CBWD1-226ENST00000618061 KRT85P78386 507 aa16.43■□□□□ 0.22
CBWD1-226ENST00000618061 BARGINQ6ZT62 677 aa16.43■□□□□ 0.22
CBWD1-226ENST00000618061 LPIN2Q92539 896 aa16.43■□□□□ 0.22
CBWD1-226ENST00000618061 NGLY1Q96IV0 654 aa16.43■□□□□ 0.22
CBWD1-226ENST00000618061 TAF1P21675 1872 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms