RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 SCN9AQ15858 1988 aa23.54■■□□□ 1.36
SUSD3-205ENST00000617293 POTEIP0CG38 1075 aa23.53■■□□□ 1.36
SUSD3-205ENST00000617293 POTEJP0CG39 1038 aa23.53■■□□□ 1.36
SUSD3-205ENST00000617293 EYA2O00167 538 aa23.52■■□□□ 1.36
SUSD3-205ENST00000617293 PNMA8AQ86V59 439 aaPredicted RBP23.52■■□□□ 1.36
SUSD3-205ENST00000617293 SIL1Q9H173 461 aa23.52■■□□□ 1.36
SUSD3-205ENST00000617293 CLEC11AQ9Y240 323 aa23.52■■□□□ 1.36
SUSD3-205ENST00000617293 ZBTB7BO15156 539 aaPredicted RBP23.51■■□□□ 1.35
SUSD3-205ENST00000617293 SRGAP3O43295 1099 aa23.51■■□□□ 1.35
SUSD3-205ENST00000617293 VIL1P09327 827 aaKnown RBP23.51■■□□□ 1.35
SUSD3-205ENST00000617293 FSTL1Q12841 308 aa23.51■■□□□ 1.35
SUSD3-205ENST00000617293 UBE4AQ14139 1066 aa23.51■■□□□ 1.35
SUSD3-205ENST00000617293 CNOT7Q9UIV1 285 aaKnown RBP23.51■■□□□ 1.35
SUSD3-205ENST00000617293 USP17L3A6NCW0 530 aa23.5■■□□□ 1.35
SUSD3-205ENST00000617293 USP17L4A6NCW7 530 aa23.5■■□□□ 1.35
SUSD3-205ENST00000617293 C15orf52Q6ZUT6 534 aaKnown RBP23.5■■□□□ 1.35
SUSD3-205ENST00000617293 USP17L1Q7RTZ2 530 aa23.5■■□□□ 1.35
SUSD3-205ENST00000617293 FBXW7Q969H0 707 aa23.5■■□□□ 1.35
SUSD3-205ENST00000617293 PA2G4Q9UQ80 394 aaKnown RBP23.5■■□□□ 1.35
SUSD3-205ENST00000617293 PDE8BO95263 885 aa23.49■■□□□ 1.35
SUSD3-205ENST00000617293 CHADLQ6NUI6 762 aa23.49■■□□□ 1.35
SUSD3-205ENST00000617293 LDHDQ86WU2 507 aa23.49■■□□□ 1.35
SUSD3-205ENST00000617293 DPF2Q92785 391 aa23.49■■□□□ 1.35
SUSD3-205ENST00000617293 CD209Q9NNX6 404 aa23.49■■□□□ 1.35
SUSD3-205ENST00000617293 ADARB2Q9NS39 739 aaKnown RBP23.49■■□□□ 1.35
SUSD3-205ENST00000617293 IRS2Q9Y4H2 1338 aa23.49■■□□□ 1.35
SUSD3-205ENST00000617293 SHTN1A0MZ66 631 aa23.48■■□□□ 1.35
SUSD3-205ENST00000617293 H7C1D1 291 aa23.48■■□□□ 1.35
SUSD3-205ENST00000617293 RPS12P25398 132 aaKnown RBP23.48■■□□□ 1.35
SUSD3-205ENST00000617293 MTX1Q13505 466 aa23.48■■□□□ 1.35
SUSD3-205ENST00000617293 ATG9AQ7Z3C6 839 aa23.48■■□□□ 1.35
SUSD3-205ENST00000617293 ZNF804AQ7Z570 1209 aa23.48■■□□□ 1.35
SUSD3-205ENST00000617293 MICALL2Q8IY33 904 aa23.48■■□□□ 1.35
SUSD3-205ENST00000617293 VGLL2Q8N8G2 317 aa23.48■■□□□ 1.35
SUSD3-205ENST00000617293 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.48■■□□□ 1.35
SUSD3-205ENST00000617293 C1orf115Q9H7X2 142 aa23.48■■□□□ 1.35
SUSD3-205ENST00000617293 COPRSQ9NQ92 184 aa23.48■■□□□ 1.35
SUSD3-205ENST00000617293 FBXO3Q9UK99 471 aa23.48■■□□□ 1.35
SUSD3-205ENST00000617293 RSBN1LQ6PCB5 846 aaPredicted RBP23.47■■□□□ 1.35
SUSD3-205ENST00000617293 USP50Q70EL3 339 aaPredicted RBP23.47■■□□□ 1.35
SUSD3-205ENST00000617293 COG6Q9Y2V7 657 aa23.47■■□□□ 1.35
SUSD3-205ENST00000617293 CIAO1O76071 339 aa23.46■■□□□ 1.35
SUSD3-205ENST00000617293 PSME4Q14997 1843 aa23.46■■□□□ 1.35
SUSD3-205ENST00000617293 TTLL5Q6EMB2 1281 aa23.46■■□□□ 1.35
SUSD3-205ENST00000617293 PNMA6EA0A0J9YXQ4 647 aa23.45■■□□□ 1.34
SUSD3-205ENST00000617293 HSPA6P17066 643 aa23.45■■□□□ 1.34
SUSD3-205ENST00000617293 GYG1P46976 350 aa23.45■■□□□ 1.34
SUSD3-205ENST00000617293 GTF2IP78347 998 aa23.45■■□□□ 1.34
SUSD3-205ENST00000617293 MVPQ14764 893 aaKnown RBP23.45■■□□□ 1.34
SUSD3-205ENST00000617293 STRIP1Q5VSL9 837 aa23.45■■□□□ 1.34
SUSD3-205ENST00000617293 AGBL3Q8NEM8 1001 aa23.45■■□□□ 1.34
SUSD3-205ENST00000617293 MXD3Q9BW11 206 aa23.45■■□□□ 1.34
SUSD3-205ENST00000617293 CEP126Q9P2H0 1117 aa23.45■■□□□ 1.34
SUSD3-205ENST00000617293 HIBADHP31937 336 aaKnown RBP23.44■■□□□ 1.34
SUSD3-205ENST00000617293 IL15P40933 162 aaPredicted RBP23.44■■□□□ 1.34
SUSD3-205ENST00000617293 PUM3Q15397 648 aaKnown RBP23.44■■□□□ 1.34
SUSD3-205ENST00000617293 DACT2Q5SW24 774 aa23.44■■□□□ 1.34
SUSD3-205ENST00000617293 FAM84BQ96KN1 310 aaPredicted RBP23.44■■□□□ 1.34
SUSD3-205ENST00000617293 IL1R1P14778 569 aa23.43■■□□□ 1.34
SUSD3-205ENST00000617293 ATP8B2P98198 1209 aa23.43■■□□□ 1.34
SUSD3-205ENST00000617293 RBM26Q5T8P6 1007 aaKnown RBP23.43■■□□□ 1.34
SUSD3-205ENST00000617293 MAP1SQ66K74 1059 aaPredicted RBP23.43■■□□□ 1.34
SUSD3-205ENST00000617293 SAMD7Q7Z3H4 446 aa23.43■■□□□ 1.34
SUSD3-205ENST00000617293 VPS37DQ86XT2 251 aa23.43■■□□□ 1.34
SUSD3-205ENST00000617293 IFIT1P09914 478 aaKnown RBP23.42■■□□□ 1.34
SUSD3-205ENST00000617293 CAVIN4Q5BKX8 364 aa23.42■■□□□ 1.34
SUSD3-205ENST00000617293 C20orf194Q5TEA3 1177 aa23.42■■□□□ 1.34
SUSD3-205ENST00000617293 TRPM4Q8TD43 1214 aa23.42■■□□□ 1.34
SUSD3-205ENST00000617293 DDX19BQ9UMR2 479 aa23.42■■□□□ 1.34
SUSD3-205ENST00000617293 SLC5A1P13866 664 aa23.41■■□□□ 1.34
SUSD3-205ENST00000617293 FGFR2P21802 821 aa23.41■■□□□ 1.34
SUSD3-205ENST00000617293 HIRAP54198 1017 aaPredicted RBP23.41■■□□□ 1.34
SUSD3-205ENST00000617293 PDE3AQ14432 1141 aa23.41■■□□□ 1.34
SUSD3-205ENST00000617293 TBC1D10BQ4KMP7 808 aaPredicted RBP23.41■■□□□ 1.34
SUSD3-205ENST00000617293 LPIN2Q92539 896 aa23.41■■□□□ 1.34
SUSD3-205ENST00000617293 GMLQ99445 158 aa23.41■■□□□ 1.34
SUSD3-205ENST00000617293 ADAMTSL1Q8N6G6 1762 aa23.41■■□□□ 1.34
SUSD3-205ENST00000617293 USP17L8P0C7I0 530 aa23.4■■□□□ 1.34
SUSD3-205ENST00000617293 FBXO33Q7Z6M2 555 aa23.4■■□□□ 1.34
SUSD3-205ENST00000617293 CNTROBQ8N137 903 aa23.4■■□□□ 1.34
SUSD3-205ENST00000617293 JAG2Q9Y219 1238 aa23.4■■□□□ 1.34
SUSD3-205ENST00000617293 MYO3BQ8WXR4 1341 aa23.39■■□□□ 1.34
SUSD3-205ENST00000617293 SASH1O94885 1247 aa23.39■■□□□ 1.33
SUSD3-205ENST00000617293 EGFRP00533 1210 aa23.39■■□□□ 1.33
SUSD3-205ENST00000617293 BCAMP50895 628 aa23.39■■□□□ 1.33
SUSD3-205ENST00000617293 G3BP1Q13283 466 aaKnown RBP eCLIP23.39■■□□□ 1.33
SUSD3-205ENST00000617293 TDRD7Q8NHU6 1098 aaKnown RBP23.39■■□□□ 1.33
SUSD3-205ENST00000617293 SSH3Q8TE77 659 aa23.39■■□□□ 1.33
SUSD3-205ENST00000617293 FRAT2O75474 233 aaPredicted RBP23.38■■□□□ 1.33
SUSD3-205ENST00000617293 POLA2Q14181 598 aa23.38■■□□□ 1.33
SUSD3-205ENST00000617293 ATP2B3Q16720 1220 aa23.38■■□□□ 1.33
SUSD3-205ENST00000617293 IQSEC3Q9UPP2 1182 aaPredicted RBP23.38■■□□□ 1.33
SUSD3-205ENST00000617293 ZNF609O15014 1411 aa23.38■■□□□ 1.33
SUSD3-205ENST00000617293 ZNF646O15015 1829 aaPredicted RBP23.38■■□□□ 1.33
SUSD3-205ENST00000617293 ITGBL1O95965 494 aaPredicted RBP23.37■■□□□ 1.33
SUSD3-205ENST00000617293 APLP1P51693 650 aa23.37■■□□□ 1.33
SUSD3-205ENST00000617293 ZNF280AP59817 542 aaPredicted RBP23.37■■□□□ 1.33
SUSD3-205ENST00000617293 TFCP2Q12800 502 aa23.37■■□□□ 1.33
SUSD3-205ENST00000617293 KIF4BQ2VIQ3 1234 aa23.37■■□□□ 1.33
SUSD3-205ENST00000617293 CEP85Q6P2H3 762 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms