RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 LDHAL6AQ6ZMR3 332 aa13.51□□□□□ -0.25
MMP28-206ENST00000616383 DDX46Q7L014 1031 aaKnown RBP13.51□□□□□ -0.25
MMP28-206ENST00000616383 KLRG2A4D1S0 409 aaPredicted RBP13.5□□□□□ -0.25
MMP28-206ENST00000616383 PDE6BP35913 854 aa13.5□□□□□ -0.25
MMP28-206ENST00000616383 VASPP50552 380 aaPredicted RBP13.5□□□□□ -0.25
MMP28-206ENST00000616383 ANKRD18AQ8IVF6 992 aa13.5□□□□□ -0.25
MMP28-206ENST00000616383 OTUD7AQ8TE49 926 aaPredicted RBP13.5□□□□□ -0.25
MMP28-206ENST00000616383 CELF1Q92879 486 aaKnown RBP13.5□□□□□ -0.25
MMP28-206ENST00000616383 MARVELD3Q96A59 401 aa13.5□□□□□ -0.25
MMP28-206ENST00000616383 MPHOSPH8Q99549 860 aa13.5□□□□□ -0.25
MMP28-206ENST00000616383 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
MMP28-206ENST00000616383 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.5□□□□□ -0.25
MMP28-206ENST00000616383 BRCA1P38398 1863 aaKnown RBP13.49□□□□□ -0.25
MMP28-206ENST00000616383 POLD1P28340 1107 aa13.49□□□□□ -0.25
MMP28-206ENST00000616383 C16orf71Q8IYS4 520 aaPredicted RBP13.49□□□□□ -0.25
MMP28-206ENST00000616383 CLASRPQ8N2M8 674 aaKnown RBP13.49□□□□□ -0.25
MMP28-206ENST00000616383 RBM17Q96I25 401 aaKnown RBP13.49□□□□□ -0.25
MMP28-206ENST00000616383 MYH13Q9UKX3 1938 aa13.49□□□□□ -0.25
MMP28-206ENST00000616383 LTBP1Q14766 1721 aa13.48□□□□□ -0.25
MMP28-206ENST00000616383 MROH5Q6ZUA9 1318 aa13.48□□□□□ -0.25
MMP28-206ENST00000616383 HOXA10P31260 410 aaPredicted RBP13.48□□□□□ -0.25
MMP28-206ENST00000616383 RPS8P62241 208 aaKnown RBP13.48□□□□□ -0.25
MMP28-206ENST00000616383 GRAPQ13588 217 aa13.48□□□□□ -0.25
MMP28-206ENST00000616383 TNNI3KQ59H18 835 aa13.48□□□□□ -0.25
MMP28-206ENST00000616383 METTL24Q5JXM2 366 aa13.48□□□□□ -0.25
MMP28-206ENST00000616383 AACSQ86V21 672 aa13.48□□□□□ -0.25
MMP28-206ENST00000616383 GRAPLQ8TC17 118 aaPredicted RBP13.48□□□□□ -0.25
MMP28-206ENST00000616383 CEP126Q9P2H0 1117 aa13.48□□□□□ -0.25
MMP28-206ENST00000616383 PPP1R1BQ9UD71 204 aaPredicted RBP13.48□□□□□ -0.25
MMP28-206ENST00000616383 FPGT-TNNI3KV9GXZ4 949 aa13.48□□□□□ -0.25
MMP28-206ENST00000616383 SLX4Q8IY92 1834 aa13.48□□□□□ -0.25
MMP28-206ENST00000616383 SALL3Q9BXA9 1300 aa13.47□□□□□ -0.25
MMP28-206ENST00000616383 SRGNP10124 158 aa13.47□□□□□ -0.25
MMP28-206ENST00000616383 NPR1P16066 1061 aa13.47□□□□□ -0.25
MMP28-206ENST00000616383 C2CD5Q86YS7 1000 aa13.47□□□□□ -0.25
MMP28-206ENST00000616383 PLEKHM2Q8IWE5 1019 aa13.47□□□□□ -0.25
MMP28-206ENST00000616383 VGLL2Q8N8G2 317 aa13.47□□□□□ -0.25
MMP28-206ENST00000616383 EAF2Q96CJ1 260 aaPredicted RBP13.47□□□□□ -0.25
MMP28-206ENST00000616383 L3MBTL3Q96JM7 780 aaPredicted RBP13.47□□□□□ -0.25
MMP28-206ENST00000616383 CRAMP1Q96RY5 1269 aa13.47□□□□□ -0.25
MMP28-206ENST00000616383 GPR108Q9NPR9 543 aa13.47□□□□□ -0.25
MMP28-206ENST00000616383 BSDC1Q9NW68 430 aaPredicted RBP13.47□□□□□ -0.25
MMP28-206ENST00000616383 H0YIN7 160 aa13.46□□□□□ -0.25
MMP28-206ENST00000616383 IFIT2P09913 472 aaKnown RBP13.46□□□□□ -0.25
MMP28-206ENST00000616383 MX1P20591 662 aa13.46□□□□□ -0.25
MMP28-206ENST00000616383 HELBQ8NG08 1087 aaPredicted RBP13.46□□□□□ -0.25
MMP28-206ENST00000616383 TLR7Q9NYK1 1049 aaKnown RBP13.46□□□□□ -0.25
MMP28-206ENST00000616383 CHRNA5P30532 468 aa13.45□□□□□ -0.26
MMP28-206ENST00000616383 PDE1AP54750 535 aa13.45□□□□□ -0.26
MMP28-206ENST00000616383 CHRNDQ07001 517 aa13.45□□□□□ -0.26
MMP28-206ENST00000616383 ATP2B3Q16720 1220 aa13.45□□□□□ -0.26
MMP28-206ENST00000616383 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
MMP28-206ENST00000616383 CCDC8Q9H0W5 538 aaPredicted RBP13.45□□□□□ -0.26
MMP28-206ENST00000616383 DBNLQ9UJU6 430 aaKnown RBP13.45□□□□□ -0.26
MMP28-206ENST00000616383 AKAP2Q9Y2D5 859 aa13.45□□□□□ -0.26
MMP28-206ENST00000616383 A0A1B0GUL7 405 aa13.44□□□□□ -0.26
MMP28-206ENST00000616383 TAF5LO75529 589 aa13.44□□□□□ -0.26
MMP28-206ENST00000616383 PDE8BO95263 885 aa13.44□□□□□ -0.26
MMP28-206ENST00000616383 PTGER2P43116 358 aa13.44□□□□□ -0.26
MMP28-206ENST00000616383 TSHZ3Q63HK5 1081 aa13.44□□□□□ -0.26
MMP28-206ENST00000616383 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
MMP28-206ENST00000616383 SLC51AQ86UW1 340 aa13.44□□□□□ -0.26
MMP28-206ENST00000616383 NEUROD6Q96NK8 337 aa13.44□□□□□ -0.26
MMP28-206ENST00000616383 DBNDD2Q9BQY9 259 aa13.44□□□□□ -0.26
MMP28-206ENST00000616383 STAP2Q9UGK3 403 aa13.44□□□□□ -0.26
MMP28-206ENST00000616383 MINPP1Q9UNW1 487 aa13.44□□□□□ -0.26
MMP28-206ENST00000616383 AKAP11Q9UKA4 1901 aa13.44□□□□□ -0.26
MMP28-206ENST00000616383 AOX1Q06278 1338 aa13.43□□□□□ -0.26
MMP28-206ENST00000616383 PPEF1O14829 653 aaPredicted RBP13.43□□□□□ -0.26
MMP28-206ENST00000616383 BBOX1O75936 387 aa13.43□□□□□ -0.26
MMP28-206ENST00000616383 ALDH1B1P30837 517 aa13.43□□□□□ -0.26
MMP28-206ENST00000616383 PSEN1P49768 467 aa13.43□□□□□ -0.26
MMP28-206ENST00000616383 PUM3Q15397 648 aaKnown RBP13.43□□□□□ -0.26
MMP28-206ENST00000616383 ZNF622Q969S3 477 aaKnown RBP eCLIP13.43□□□□□ -0.26
MMP28-206ENST00000616383 GPATCH3Q96I76 525 aa13.43□□□□□ -0.26
MMP28-206ENST00000616383 ANKRD2Q9GZV1 360 aa13.43□□□□□ -0.26
MMP28-206ENST00000616383 OSBPL3Q9H4L5 887 aa13.43□□□□□ -0.26
MMP28-206ENST00000616383 DUOX1Q9NRD9 1551 aa13.43□□□□□ -0.26
MMP28-206ENST00000616383 MYH7P12883 1935 aa13.43□□□□□ -0.26
MMP28-206ENST00000616383 TTC41PQ6P2S7 1318 aa13.42□□□□□ -0.26
MMP28-206ENST00000616383 FGFR2P21802 821 aa13.42□□□□□ -0.26
MMP28-206ENST00000616383 ADORA1P30542 326 aa13.42□□□□□ -0.26
MMP28-206ENST00000616383 TIMM10P62072 90 aa13.42□□□□□ -0.26
MMP28-206ENST00000616383 TTC22Q5TAA0 569 aa13.42□□□□□ -0.26
MMP28-206ENST00000616383 TMC4Q7Z404 712 aa13.42□□□□□ -0.26
MMP28-206ENST00000616383 PDCD7Q8N8D1 485 aaKnown RBP13.42□□□□□ -0.26
MMP28-206ENST00000616383 ECHDC1Q9NTX5 307 aa13.42□□□□□ -0.26
MMP28-206ENST00000616383 SNAP23O00161 211 aa13.41□□□□□ -0.26
MMP28-206ENST00000616383 SLC5A1P13866 664 aa13.41□□□□□ -0.26
MMP28-206ENST00000616383 GSPT1P15170 499 aaKnown RBP13.41□□□□□ -0.26
MMP28-206ENST00000616383 DPEP1P16444 411 aa13.41□□□□□ -0.26
MMP28-206ENST00000616383 PRPF40BQ6NWY9 871 aaKnown RBP13.41□□□□□ -0.26
MMP28-206ENST00000616383 PI4K2BQ8TCG2 481 aa13.41□□□□□ -0.26
MMP28-206ENST00000616383 LPIN2Q92539 896 aa13.41□□□□□ -0.26
MMP28-206ENST00000616383 XAGE2Q96GT9 111 aa13.41□□□□□ -0.26
MMP28-206ENST00000616383 SPON1Q9HCB6 807 aa13.41□□□□□ -0.26
MMP28-206ENST00000616383 MYO5AQ9Y4I1 1855 aaKnown RBP13.41□□□□□ -0.26
MMP28-206ENST00000616383 ARFGEF1Q9Y6D6 1849 aa13.41□□□□□ -0.26
MMP28-206ENST00000616383 XDHP47989 1333 aa13.4□□□□□ -0.26
MMP28-206ENST00000616383 KCNJ4P48050 445 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms