RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 SCN9AQ15858 1988 aa13.48□□□□□ -0.25
COL4A1-205ENST00000615732 RPS8P62241 208 aaKnown RBP13.47□□□□□ -0.25
COL4A1-205ENST00000615732 TRIM28Q13263 835 aaKnown RBP13.47□□□□□ -0.25
COL4A1-205ENST00000615732 KRT26Q7Z3Y9 468 aa13.47□□□□□ -0.25
COL4A1-205ENST00000615732 ARHGAP45Q92619 1136 aa13.47□□□□□ -0.25
COL4A1-205ENST00000615732 EYA3Q99504 573 aa13.47□□□□□ -0.25
COL4A1-205ENST00000615732 CHMP4BQ9H444 224 aaKnown RBP13.47□□□□□ -0.25
COL4A1-205ENST00000615732 ASTN2O75129 1339 aaPredicted RBP13.46□□□□□ -0.25
COL4A1-205ENST00000615732 RGMBQ6NW40 437 aa13.46□□□□□ -0.25
COL4A1-205ENST00000615732 GBA2Q9HCG7 927 aaPredicted RBP13.46□□□□□ -0.25
COL4A1-205ENST00000615732 CWC25Q9NXE8 425 aaPredicted RBP13.46□□□□□ -0.25
COL4A1-205ENST00000615732 ANKIB1Q9P2G1 1089 aa13.46□□□□□ -0.25
COL4A1-205ENST00000615732 GGA1Q9UJY5 639 aa13.46□□□□□ -0.25
COL4A1-205ENST00000615732 POLR2AP24928 1970 aaKnown RBP13.45□□□□□ -0.26
COL4A1-205ENST00000615732 PCCAP05165 728 aaPredicted RBP13.45□□□□□ -0.26
COL4A1-205ENST00000615732 RPS12P25398 132 aaKnown RBP13.45□□□□□ -0.26
COL4A1-205ENST00000615732 KIF4BQ2VIQ3 1234 aa13.45□□□□□ -0.26
COL4A1-205ENST00000615732 CCDC152Q4G0S7 254 aa13.45□□□□□ -0.26
COL4A1-205ENST00000615732 TMEM57Q8N5G2 664 aa13.45□□□□□ -0.26
COL4A1-205ENST00000615732 CCDC191Q8NCU4 936 aa13.45□□□□□ -0.26
COL4A1-205ENST00000615732 GGA3Q9NZ52 723 aa13.45□□□□□ -0.26
COL4A1-205ENST00000615732 MAP3K2Q9Y2U5 619 aa13.45□□□□□ -0.26
COL4A1-205ENST00000615732 PSME4Q14997 1843 aa13.44□□□□□ -0.26
COL4A1-205ENST00000615732 PDE8AO60658 829 aa13.44□□□□□ -0.26
COL4A1-205ENST00000615732 DCPSQ96C86 337 aaKnown RBP13.44□□□□□ -0.26
COL4A1-205ENST00000615732 METTL22Q9BUU2 404 aaPredicted RBP13.44□□□□□ -0.26
COL4A1-205ENST00000615732 STK31Q9BXU1 1019 aa13.44□□□□□ -0.26
COL4A1-205ENST00000615732 ZC3H12CQ9C0D7 883 aaKnown RBP13.44□□□□□ -0.26
COL4A1-205ENST00000615732 SAGE1Q9NXZ1 904 aa13.44□□□□□ -0.26
COL4A1-205ENST00000615732 PODXL2Q9NZ53 605 aa13.44□□□□□ -0.26
COL4A1-205ENST00000615732 WTIPA6NIX2 430 aaPredicted RBP13.43□□□□□ -0.26
COL4A1-205ENST00000615732 G3V3G9 751 aa13.43□□□□□ -0.26
COL4A1-205ENST00000615732 DDX58O95786 925 aaKnown RBP13.43□□□□□ -0.26
COL4A1-205ENST00000615732 IGKV5-2P06315 115 aa13.43□□□□□ -0.26
COL4A1-205ENST00000615732 ZNF157P51786 506 aaPredicted RBP13.43□□□□□ -0.26
COL4A1-205ENST00000615732 CTSWP56202 376 aa13.43□□□□□ -0.26
COL4A1-205ENST00000615732 KIF23Q02241 960 aaPredicted RBP13.43□□□□□ -0.26
COL4A1-205ENST00000615732 DCAF8Q5TAQ9 597 aa13.43□□□□□ -0.26
COL4A1-205ENST00000615732 CCDC30Q5VVM6 783 aa13.43□□□□□ -0.26
COL4A1-205ENST00000615732 ANKRD18AQ8IVF6 992 aa13.43□□□□□ -0.26
COL4A1-205ENST00000615732 C2orf69Q8N8R5 385 aa13.43□□□□□ -0.26
COL4A1-205ENST00000615732 PTPRCP08575 1304 aa13.42□□□□□ -0.26
COL4A1-205ENST00000615732 ZNF609O15014 1411 aa13.42□□□□□ -0.26
COL4A1-205ENST00000615732 PI4KAP2A4QPH2 592 aa13.42□□□□□ -0.26
COL4A1-205ENST00000615732 SLC10A3P09131 477 aa13.42□□□□□ -0.26
COL4A1-205ENST00000615732 VIL1P09327 827 aaKnown RBP13.42□□□□□ -0.26
COL4A1-205ENST00000615732 CWF19L2Q2TBE0 894 aaKnown RBP13.42□□□□□ -0.26
COL4A1-205ENST00000615732 PI4KAP1Q8N8J0 262 aa13.42□□□□□ -0.26
COL4A1-205ENST00000615732 CCDC102AQ96A19 550 aa13.42□□□□□ -0.26
COL4A1-205ENST00000615732 CDCA5Q96FF9 252 aa13.42□□□□□ -0.26
COL4A1-205ENST00000615732 CHMP4AQ9BY43 222 aa13.42□□□□□ -0.26
COL4A1-205ENST00000615732 RWDD1Q9H446 243 aaPredicted RBP13.42□□□□□ -0.26
COL4A1-205ENST00000615732 SCAF8Q9UPN6 1271 aaKnown RBP13.42□□□□□ -0.26
COL4A1-205ENST00000615732 XDHP47989 1333 aa13.41□□□□□ -0.26
COL4A1-205ENST00000615732 HSP90B1P14625 803 aaKnown RBP13.41□□□□□ -0.26
COL4A1-205ENST00000615732 G2E3Q7L622 706 aa13.41□□□□□ -0.26
COL4A1-205ENST00000615732 SULF1Q8IWU6 871 aa13.41□□□□□ -0.26
COL4A1-205ENST00000615732 GREM2Q9H772 168 aa13.41□□□□□ -0.26
COL4A1-205ENST00000615732 RNF186Q9NXI6 227 aa13.41□□□□□ -0.26
COL4A1-205ENST00000615732 AKAP11Q9UKA4 1901 aa13.41□□□□□ -0.26
COL4A1-205ENST00000615732 PAPPA2Q9BXP8 1791 aa13.4□□□□□ -0.26
COL4A1-205ENST00000615732 TRPA1O75762 1119 aa13.4□□□□□ -0.26
COL4A1-205ENST00000615732 RSBN1LQ6PCB5 846 aaPredicted RBP13.4□□□□□ -0.26
COL4A1-205ENST00000615732 RASAL3Q86YV0 1011 aa13.4□□□□□ -0.26
COL4A1-205ENST00000615732 FBXW7Q969H0 707 aa13.4□□□□□ -0.26
COL4A1-205ENST00000615732 MXD3Q9BW11 206 aa13.4□□□□□ -0.26
COL4A1-205ENST00000615732 ZNF646O15015 1829 aaPredicted RBP13.4□□□□□ -0.26
COL4A1-205ENST00000615732 NEURL1BA8MQ27 555 aa13.39□□□□□ -0.27
COL4A1-205ENST00000615732 SLC4A2P04920 1241 aa13.39□□□□□ -0.27
COL4A1-205ENST00000615732 SOX10P56693 466 aa13.39□□□□□ -0.27
COL4A1-205ENST00000615732 ZNF280AP59817 542 aaPredicted RBP13.39□□□□□ -0.27
COL4A1-205ENST00000615732 ANGEL2Q5VTE6 544 aaKnown RBP13.39□□□□□ -0.27
COL4A1-205ENST00000615732 KSR2Q6VAB6 950 aa13.39□□□□□ -0.27
COL4A1-205ENST00000615732 UBE3BQ7Z3V4 1068 aa13.39□□□□□ -0.27
COL4A1-205ENST00000615732 CSRNP1Q96S65 589 aa13.39□□□□□ -0.27
COL4A1-205ENST00000615732 CDC5LQ99459 802 aaKnown RBP13.39□□□□□ -0.27
COL4A1-205ENST00000615732 PCDHB15Q9Y5E8 787 aa13.39□□□□□ -0.27
COL4A1-205ENST00000615732 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
COL4A1-205ENST00000615732 IGHDP01880 384 aa13.38□□□□□ -0.27
COL4A1-205ENST00000615732 ATP2B4P23634 1241 aa13.38□□□□□ -0.27
COL4A1-205ENST00000615732 NEXNQ0ZGT2 675 aa13.38□□□□□ -0.27
COL4A1-205ENST00000615732 SCARF1Q14162 830 aa13.38□□□□□ -0.27
COL4A1-205ENST00000615732 TTLL11Q8NHH1 800 aa13.38□□□□□ -0.27
COL4A1-205ENST00000615732 MED23Q9ULK4 1368 aa13.37□□□□□ -0.27
COL4A1-205ENST00000615732 USP17L3A6NCW0 530 aa13.37□□□□□ -0.27
COL4A1-205ENST00000615732 USP17L4A6NCW7 530 aa13.37□□□□□ -0.27
COL4A1-205ENST00000615732 KLRK1P26718 216 aa13.37□□□□□ -0.27
COL4A1-205ENST00000615732 USP17L1Q7RTZ2 530 aa13.37□□□□□ -0.27
COL4A1-205ENST00000615732 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
COL4A1-205ENST00000615732 GMLQ99445 158 aa13.37□□□□□ -0.27
COL4A1-205ENST00000615732 MYOZ2Q9NPC6 264 aa13.37□□□□□ -0.27
COL4A1-205ENST00000615732 ZBTB40Q9NUA8 1239 aa13.37□□□□□ -0.27
COL4A1-205ENST00000615732 CACNA1FO60840 1977 aa13.37□□□□□ -0.27
COL4A1-205ENST00000615732 USP17L8P0C7I0 530 aa13.36□□□□□ -0.27
COL4A1-205ENST00000615732 FLIIQ13045 1269 aa13.36□□□□□ -0.27
COL4A1-205ENST00000615732 MOB2Q70IA6 237 aa13.36□□□□□ -0.27
COL4A1-205ENST00000615732 BSDC1Q9NW68 430 aaPredicted RBP13.36□□□□□ -0.27
COL4A1-205ENST00000615732 MINPP1Q9UNW1 487 aa13.36□□□□□ -0.27
COL4A1-205ENST00000615732 RBM19Q9Y4C8 960 aaKnown RBP13.36□□□□□ -0.27
COL4A1-205ENST00000615732 PITPNM2Q9BZ72 1349 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms