RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 TNIP1Q15025 636 aa16.39■□□□□ 0.21
MDC1-209ENST00000613547 CAVIN4Q5BKX8 364 aa16.39■□□□□ 0.21
MDC1-209ENST00000613547 PODNQ7Z5L7 613 aa16.39■□□□□ 0.21
MDC1-209ENST00000613547 VPS37DQ86XT2 251 aa16.39■□□□□ 0.21
MDC1-209ENST00000613547 GLTPD2A6NH11 291 aa16.38■□□□□ 0.21
MDC1-209ENST00000613547 TFCP2Q12800 502 aa16.38■□□□□ 0.21
MDC1-209ENST00000613547 CIAPIN1Q6FI81 312 aa16.38■□□□□ 0.21
MDC1-209ENST00000613547 SIRT2Q8IXJ6 389 aa16.38■□□□□ 0.21
MDC1-209ENST00000613547 GPC2Q8N158 579 aa16.38■□□□□ 0.21
MDC1-209ENST00000613547 TIAM2Q8IVF5 1701 aa16.38■□□□□ 0.21
MDC1-209ENST00000613547 FGFR2P21802 821 aa16.37■□□□□ 0.21
MDC1-209ENST00000613547 KLRK1P26718 216 aa16.37■□□□□ 0.21
MDC1-209ENST00000613547 HIBADHP31937 336 aaKnown RBP16.37■□□□□ 0.21
MDC1-209ENST00000613547 TXNRD3Q86VQ6 643 aa16.37■□□□□ 0.21
MDC1-209ENST00000613547 EXOC6Q8TAG9 804 aa16.37■□□□□ 0.21
MDC1-209ENST00000613547 ZNF526Q8TF50 670 aaPredicted RBP16.37■□□□□ 0.21
MDC1-209ENST00000613547 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
MDC1-209ENST00000613547 GJA3Q9Y6H8 435 aa16.37■□□□□ 0.21
MDC1-209ENST00000613547 ZNF541Q9H0D2 1346 aa16.37■□□□□ 0.21
MDC1-209ENST00000613547 SBF1O95248 1867 aa16.37■□□□□ 0.21
MDC1-209ENST00000613547 COL4A5P29400 1685 aa16.37■□□□□ 0.21
MDC1-209ENST00000613547 RAD17O75943 681 aa16.36■□□□□ 0.21
MDC1-209ENST00000613547 CXCL9Q07325 125 aa16.36■□□□□ 0.21
MDC1-209ENST00000613547 GPBP1L1Q9HC44 474 aaPredicted RBP16.36■□□□□ 0.21
MDC1-209ENST00000613547 CD209Q9NNX6 404 aa16.36■□□□□ 0.21
MDC1-209ENST00000613547 IRS2Q9Y4H2 1338 aa16.36■□□□□ 0.21
MDC1-209ENST00000613547 YDJCA8MPS7 323 aa16.35■□□□□ 0.21
MDC1-209ENST00000613547 RAB11FIP3O75154 756 aa16.35■□□□□ 0.21
MDC1-209ENST00000613547 DDNO94850 711 aaPredicted RBP16.35■□□□□ 0.21
MDC1-209ENST00000613547 SASH1O94885 1247 aa16.35■□□□□ 0.21
MDC1-209ENST00000613547 GYG1P46976 350 aa16.35■□□□□ 0.21
MDC1-209ENST00000613547 IRX6P78412 446 aaPredicted RBP16.35■□□□□ 0.21
MDC1-209ENST00000613547 FAM84BQ96KN1 310 aaPredicted RBP16.35■□□□□ 0.21
MDC1-209ENST00000613547 GPR108Q9NPR9 543 aa16.35■□□□□ 0.21
MDC1-209ENST00000613547 PCDHB15Q9Y5E8 787 aa16.35■□□□□ 0.21
MDC1-209ENST00000613547 A0A1B0GUL7 405 aa16.34■□□□□ 0.21
MDC1-209ENST00000613547 USP17L3A6NCW0 530 aa16.34■□□□□ 0.21
MDC1-209ENST00000613547 USP17L4A6NCW7 530 aa16.34■□□□□ 0.21
MDC1-209ENST00000613547 FRAT2O75474 233 aaPredicted RBP16.34■□□□□ 0.21
MDC1-209ENST00000613547 GORABQ5T7V8 394 aa16.34■□□□□ 0.21
MDC1-209ENST00000613547 USP17L1Q7RTZ2 530 aa16.34■□□□□ 0.21
MDC1-209ENST00000613547 KIF1BPQ96EK5 621 aa16.34■□□□□ 0.21
MDC1-209ENST00000613547 NEUROD6Q96NK8 337 aa16.34■□□□□ 0.21
MDC1-209ENST00000613547 GNL3LQ9NVN8 582 aaKnown RBP16.34■□□□□ 0.21
MDC1-209ENST00000613547 DICER1Q9UPY3 1922 aaKnown RBP16.33■□□□□ 0.21
MDC1-209ENST00000613547 IQCA1LA6NCM1 817 aa16.33■□□□□ 0.2
MDC1-209ENST00000613547 NEFLP07196 543 aa16.33■□□□□ 0.2
MDC1-209ENST00000613547 IL1R1P14778 569 aa16.33■□□□□ 0.2
MDC1-209ENST00000613547 LMOD1P29536 600 aaPredicted RBP16.33■□□□□ 0.2
MDC1-209ENST00000613547 TNNI3KQ59H18 835 aa16.33■□□□□ 0.2
MDC1-209ENST00000613547 STRIP1Q5VSL9 837 aa16.33■□□□□ 0.2
MDC1-209ENST00000613547 ZNF784Q8NCA9 323 aaPredicted RBP16.33■□□□□ 0.2
MDC1-209ENST00000613547 FBXW7Q969H0 707 aa16.33■□□□□ 0.2
MDC1-209ENST00000613547 FPGT-TNNI3KV9GXZ4 949 aa16.33■□□□□ 0.2
MDC1-209ENST00000613547 A0A1B0GUL6 1792 aa16.32■□□□□ 0.2
MDC1-209ENST00000613547 APBB1O00213 710 aa16.32■□□□□ 0.2
MDC1-209ENST00000613547 PSMD14O00487 310 aa16.32■□□□□ 0.2
MDC1-209ENST00000613547 ZNF609O15014 1411 aa16.32■□□□□ 0.2
MDC1-209ENST00000613547 RPS12P25398 132 aaKnown RBP16.32■□□□□ 0.2
MDC1-209ENST00000613547 BCAMP50895 628 aa16.32■□□□□ 0.2
MDC1-209ENST00000613547 TIMM10P62072 90 aa16.32■□□□□ 0.2
MDC1-209ENST00000613547 FBXO33Q7Z6M2 555 aa16.32■□□□□ 0.2
MDC1-209ENST00000613547 RHPN1Q8TCX5 695 aa16.32■□□□□ 0.2
MDC1-209ENST00000613547 L3MBTL3Q96JM7 780 aaPredicted RBP16.32■□□□□ 0.2
MDC1-209ENST00000613547 CCDC88AQ3V6T2 1871 aa16.31■□□□□ 0.2
MDC1-209ENST00000613547 MYO3BQ8WXR4 1341 aa16.31■□□□□ 0.2
MDC1-209ENST00000613547 VEGFAP15692 232 aaPredicted RBP16.31■□□□□ 0.2
MDC1-209ENST00000613547 GTF2IP78347 998 aa16.31■□□□□ 0.2
MDC1-209ENST00000613547 HDAC1Q13547 482 aaPredicted RBP16.31■□□□□ 0.2
MDC1-209ENST00000613547 TTLL5Q6EMB2 1281 aa16.31■□□□□ 0.2
MDC1-209ENST00000613547 RSBN1LQ6PCB5 846 aaPredicted RBP16.31■□□□□ 0.2
MDC1-209ENST00000613547 CLASRPQ8N2M8 674 aaKnown RBP16.31■□□□□ 0.2
MDC1-209ENST00000613547 TDRD7Q8NHU6 1098 aaKnown RBP16.31■□□□□ 0.2
MDC1-209ENST00000613547 XAGE2Q96GT9 111 aa16.31■□□□□ 0.2
MDC1-209ENST00000613547 LRRCC1Q9C099 1032 aa16.31■□□□□ 0.2
MDC1-209ENST00000613547 RWDD1Q9H446 243 aaPredicted RBP16.31■□□□□ 0.2
MDC1-209ENST00000613547 DCTPP1Q9H773 170 aa16.31■□□□□ 0.2
MDC1-209ENST00000613547 KCNQ5Q9NR82 932 aa16.31■□□□□ 0.2
MDC1-209ENST00000613547 SEMA3EO15041 775 aa16.3■□□□□ 0.2
MDC1-209ENST00000613547 VIL1P09327 827 aaKnown RBP16.3■□□□□ 0.2
MDC1-209ENST00000613547 GMPSP49915 693 aaPredicted RBP16.3■□□□□ 0.2
MDC1-209ENST00000613547 AGBL3Q8NEM8 1001 aa16.3■□□□□ 0.2
MDC1-209ENST00000613547 DPF2Q92785 391 aa16.3■□□□□ 0.2
MDC1-209ENST00000613547 RRAGCQ9HB90 399 aa16.3■□□□□ 0.2
MDC1-209ENST00000613547 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
MDC1-209ENST00000613547 HACL1Q9UJ83 578 aa16.3■□□□□ 0.2
MDC1-209ENST00000613547 ADORA1P30542 326 aa16.29■□□□□ 0.2
MDC1-209ENST00000613547 CCDC158Q5M9N0 1113 aa16.29■□□□□ 0.2
MDC1-209ENST00000613547 CCDC102BQ68D86 513 aa16.29■□□□□ 0.2
MDC1-209ENST00000613547 AACSQ86V21 672 aa16.29■□□□□ 0.2
MDC1-209ENST00000613547 IL1RAPL2Q9NP60 686 aa16.29■□□□□ 0.2
MDC1-209ENST00000613547 NMRK2Q9NPI5 230 aa16.29■□□□□ 0.2
MDC1-209ENST00000613547 IQSEC3Q9UPP2 1182 aaPredicted RBP16.29■□□□□ 0.2
MDC1-209ENST00000613547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.29■□□□□ 0.2
MDC1-209ENST00000613547 FAM205AQ6ZU69 1335 aa16.28■□□□□ 0.2
MDC1-209ENST00000613547 IFIT2P09913 472 aaKnown RBP16.28■□□□□ 0.2
MDC1-209ENST00000613547 DACT2Q5SW24 774 aa16.28■□□□□ 0.2
MDC1-209ENST00000613547 C16orf71Q8IYS4 520 aaPredicted RBP16.28■□□□□ 0.2
MDC1-209ENST00000613547 TBC1D22AQ8WUA7 517 aa16.28■□□□□ 0.2
MDC1-209ENST00000613547 GCC1Q96CN9 775 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms