RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 PXDNLA1KZ92 1463 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 POLR3DP05423 398 aaPredicted RBP10.09□□□□□ -0.79
PDE6A-204ENST00000613228 PUM3Q15397 648 aaKnown RBP10.09□□□□□ -0.79
PDE6A-204ENST00000613228 ARHGAP23Q9P227 1491 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 CIAO1O76071 339 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 RAB3GAP1Q15042 981 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 RUFY3Q7L099 469 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 CREBRFQ8IUR6 639 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 SMARCE1Q969G3 411 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 ZNF496Q96IT1 587 aaPredicted RBP10.09□□□□□ -0.79
PDE6A-204ENST00000613228 C8orf37Q96NL8 207 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 DENND2AQ9ULE3 1009 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 ATP10DQ9P241 1426 aa10.09□□□□□ -0.79
PDE6A-204ENST00000613228 CLSTN1O94985 981 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 BAG4O95429 457 aaKnown RBP10.08□□□□□ -0.8
PDE6A-204ENST00000613228 PLCG2P16885 1265 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 TCIRG1Q13488 830 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 DDX11Q96FC9 970 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 TRERF1Q96PN7 1200 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 ATG3Q9NT62 314 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 PA2G4Q9UQ80 394 aaKnown RBP10.08□□□□□ -0.8
PDE6A-204ENST00000613228 OVOS2A0A0G2JMS6 1433 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 SH3TC1Q8TE82 1336 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 IFIT3O14879 490 aaKnown RBP10.08□□□□□ -0.8
PDE6A-204ENST00000613228 TNNT1P13805 278 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 UBE2HP62256 183 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 CREB3L3Q68CJ9 461 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 SEC63Q9UGP8 760 aaKnown RBP10.08□□□□□ -0.8
PDE6A-204ENST00000613228 ZNF444Q8N0Y2 327 aaPredicted RBP10.08□□□□□ -0.8
PDE6A-204ENST00000613228 RBM17Q96I25 401 aaKnown RBP10.08□□□□□ -0.8
PDE6A-204ENST00000613228 MKNK2Q9HBH9 465 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 MAGEC2Q9UBF1 373 aaPredicted RBP10.08□□□□□ -0.8
PDE6A-204ENST00000613228 PLEKHG2Q9H7P9 1386 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 CDR1P51861 262 aa10.08□□□□□ -0.8
PDE6A-204ENST00000613228 CCDC43Q96MW1 224 aaKnown RBP10.08□□□□□ -0.8
PDE6A-204ENST00000613228 IFT172Q9UG01 1749 aa10.07□□□□□ -0.8
PDE6A-204ENST00000613228 ATP5JP18859 108 aa10.07□□□□□ -0.8
PDE6A-204ENST00000613228 TMEM67Q5HYA8 995 aa10.07□□□□□ -0.8
PDE6A-204ENST00000613228 TRIM5Q9C035 493 aa10.07□□□□□ -0.8
PDE6A-204ENST00000613228 PCCAP05165 728 aaPredicted RBP10.07□□□□□ -0.8
PDE6A-204ENST00000613228 CT47A1Q5JQC4 288 aaPredicted RBP10.07□□□□□ -0.8
PDE6A-204ENST00000613228 HOMER1Q86YM7 354 aa10.07□□□□□ -0.8
PDE6A-204ENST00000613228 RNF214Q8ND24 703 aa10.07□□□□□ -0.8
PDE6A-204ENST00000613228 ZFP91Q96JP5 570 aaPredicted RBP10.07□□□□□ -0.8
PDE6A-204ENST00000613228 USP44Q9H0E7 712 aa10.07□□□□□ -0.8
PDE6A-204ENST00000613228 METAP2P50579 478 aaKnown RBP eCLIP10.07□□□□□ -0.8
PDE6A-204ENST00000613228 ESR2Q92731 530 aa10.07□□□□□ -0.8
PDE6A-204ENST00000613228 LLPHQ9BRT6 129 aaKnown RBP10.07□□□□□ -0.8
PDE6A-204ENST00000613228 TM6SF1Q9BZW5 370 aa10.07□□□□□ -0.8
PDE6A-204ENST00000613228 ANO10Q9NW15 660 aa10.07□□□□□ -0.8
PDE6A-204ENST00000613228 SGSM2O43147 1006 aa10.07□□□□□ -0.8
PDE6A-204ENST00000613228 EIF3JO75822 258 aaKnown RBP10.07□□□□□ -0.8
PDE6A-204ENST00000613228 GTF2F1P35269 517 aaKnown RBP eCLIP10.07□□□□□ -0.8
PDE6A-204ENST00000613228 ACSBG1Q96GR2 724 aa10.07□□□□□ -0.8
PDE6A-204ENST00000613228 GNAQP50148 359 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 CCAR2Q8N163 923 aaKnown RBP10.06□□□□□ -0.8
PDE6A-204ENST00000613228 TRAF1Q13077 416 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 IKQ13123 557 aaPredicted RBP10.06□□□□□ -0.8
PDE6A-204ENST00000613228 TSHZ3Q63HK5 1081 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 PCMTD1Q96MG8 357 aaPredicted RBP10.06□□□□□ -0.8
PDE6A-204ENST00000613228 KIAA0754O94854 1291 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 KANK3Q6NY19 840 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 NEFHP12036 1026 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 IARSP41252 1262 aaKnown RBP10.06□□□□□ -0.8
PDE6A-204ENST00000613228 HEG1Q9ULI3 1381 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 PNMA6EA0A0J9YXQ4 647 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 ITGA6P23229 1130 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 TTC31Q49AM3 519 aaPredicted RBP10.06□□□□□ -0.8
PDE6A-204ENST00000613228 TRAPPC3LQ5T215 181 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 BRINP3Q76B58 766 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 DHX32Q7L7V1 743 aaKnown RBP10.06□□□□□ -0.8
PDE6A-204ENST00000613228 PANK2Q9BZ23 570 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 EHMT1Q9H9B1 1298 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 USP16Q9Y5T5 823 aa10.06□□□□□ -0.8
PDE6A-204ENST00000613228 MAGEB6P1A0A0J9YX57 407 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 MINDY4BA8MYZ0 360 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 HLA-DOAP06340 250 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 LPIN2Q92539 896 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 DSCC1Q9BVC3 393 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 RBM5P52756 815 aaKnown RBP eCLIP10.05□□□□□ -0.8
PDE6A-204ENST00000613228 SARNPP82979 210 aaKnown RBP10.05□□□□□ -0.8
PDE6A-204ENST00000613228 ZBTB38Q8NAP3 1195 aaPredicted RBP10.05□□□□□ -0.8
PDE6A-204ENST00000613228 MAP3K15Q6ZN16 1313 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 CYP7A1P22680 504 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 COPRSQ9NQ92 184 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 ZKSCAN5Q9Y2L8 839 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 SLC4A4Q9Y6R1 1079 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 IVLP07476 585 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 NBPF7P0C2Y1 421 aaPredicted RBP10.05□□□□□ -0.8
PDE6A-204ENST00000613228 BMS1Q14692 1282 aaKnown RBP10.05□□□□□ -0.8
PDE6A-204ENST00000613228 NAA16Q6N069 864 aaPredicted RBP10.05□□□□□ -0.8
PDE6A-204ENST00000613228 KBTBD3Q8NAB2 608 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 EYA3Q99504 573 aa10.05□□□□□ -0.8
PDE6A-204ENST00000613228 ADGRB2O60241 1585 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 A0A1B0GUL7 405 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 LIG1P18858 919 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 RPS6KB1P23443 525 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 WTAPQ15007 396 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 SLC9C2Q5TAH2 1124 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 KAT14Q9H8E8 782 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms