RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 MAN1A1P33908 653 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SF3A3Q12874 501 aaKnown RBP eCLIP12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 CEP85LQ5SZL2 805 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 POMGNT1Q8WZA1 660 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 RAPGEF4Q8WZA2 1011 aa12.23□□□□□ -0.45
CNTNAP3B-211ENST00000612828 E7EVH7 732 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SULT6B1Q6IMI4 303 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 PPP1R14AQ96A00 147 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ZNF396Q96N95 335 aaPredicted RBP12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 SMARCA5O60264 1052 aaPredicted RBP12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 DNAJC7Q99615 494 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ZBTB21Q9ULJ3 1066 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 NEUROG2Q9H2A3 272 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 MCM6Q14566 821 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ERMNQ8TAM6 284 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 DISP3Q9P2K9 1392 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 CCDC196A0A1B0GTZ2 297 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 MYL6BP14649 208 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 PHEXP78562 749 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 NBPF20Q3BBV1 942 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 NUP88Q99567 741 aaPredicted RBP12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 IL1RAPL2Q9NP60 686 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 RRS1Q15050 365 aaKnown RBP12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 RBM26Q5T8P6 1007 aaKnown RBP12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 GANCQ8TET4 914 aa12.22□□□□□ -0.45
CNTNAP3B-211ENST00000612828 STX6O43752 255 aa12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 FGFR1OPO95684 399 aaKnown RBP12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 TMPOP42166 694 aaKnown RBP12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 UBAC1Q9BSL1 405 aa12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ZKSCAN5Q9Y2L8 839 aa12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 CTAGE8P0CG41 777 aa12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 MCCD1P59942 119 aaPredicted RBP12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 CTAGE4Q8IX94 777 aa12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 ATP6V0A1Q93050 837 aa12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 PCF11O94913 1555 aaKnown RBP12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 TRIM14Q14142 442 aa12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 PANK2Q9BZ23 570 aa12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 KCNK9Q9NPC2 374 aa12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 CCDC85BQ15834 202 aaPredicted RBP12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 UPF3BQ9BZI7 483 aaKnown RBP12.21□□□□□ -0.45
CNTNAP3B-211ENST00000612828 CCT6AP40227 531 aaKnown RBP12.21□□□□□ -0.46
CNTNAP3B-211ENST00000612828 TXNDC2Q86VQ3 553 aa12.21□□□□□ -0.46
CNTNAP3B-211ENST00000612828 N4BP2L2Q92802 583 aaPredicted RBP12.21□□□□□ -0.46
CNTNAP3B-211ENST00000612828 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.46
CNTNAP3B-211ENST00000612828 CCDC155Q8N6L0 562 aa12.21□□□□□ -0.46
CNTNAP3B-211ENST00000612828 TSPY26PQ9H489 355 aa12.21□□□□□ -0.46
CNTNAP3B-211ENST00000612828 GTPBP10A4D1E9 387 aaKnown RBP12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 TNMDQ9H2S6 317 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 SYNPO2Q9UMS6 1093 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 CFAP100Q494V2 611 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 C8orf34Q49A92 452 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 TRIML2Q8N7C3 387 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ASZ1Q8WWH4 475 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 EPRSP07814 1512 aaKnown RBP12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 PSMA5P28066 241 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 SLC12A1Q13621 1099 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 TNPO1Q92973 898 aaKnown RBP12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 IFRD2Q12894 506 aaPredicted RBP12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 PCDHB15Q9Y5E8 787 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ZBBXA8MT70 800 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 HLA-DPA1P20036 260 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 KIAA0753Q2KHM9 967 aa12.2□□□□□ -0.46
CNTNAP3B-211ENST00000612828 NBNO60934 754 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ZC3H6P61129 1189 aaKnown RBP12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 CYB5RLQ6IPT4 315 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 EFCAB5A4FU69 1503 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 PYGLP06737 847 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 CETN1Q12798 172 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 SNX1Q13596 522 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 TOPBP1Q92547 1522 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 SYCE3A1L190 88 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 ROCK1Q13464 1354 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 NINLQ9Y2I6 1382 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 NSD3Q9BZ95 1437 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 TBCAO75347 108 aaKnown RBP12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 HSPA4P34932 840 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 KRT9P35527 623 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 GTF2A1P52655 376 aaPredicted RBP12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 CNTROBQ8N137 903 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 SEC24BO95487 1268 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 MBD3O95983 291 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 KSR1Q8IVT5 923 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 MOSPD1Q9UJG1 213 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 SCAPERQ9BY12 1400 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 FAM170AA1A519 330 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 HIP1RO75146 1068 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 TRIM27P14373 513 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 GKAP1Q5VSY0 366 aaPredicted RBP12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 NACAP1Q9BZK3 213 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 USP25Q9UHP3 1055 aa12.19□□□□□ -0.46
CNTNAP3B-211ENST00000612828 LRPPRCP42704 1394 aaKnown RBP12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 SPDL1Q96EA4 605 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 TRIM37O94972 964 aa12.18□□□□□ -0.46
CNTNAP3B-211ENST00000612828 FBLN1P23142 703 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms