RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 MAP3K2Q9Y2U5 619 aa30.29■■■□□ 2.44
MMP28-203ENST00000612672 TXNRD3Q86VQ6 643 aa30.28■■■□□ 2.44
MMP28-203ENST00000612672 TTLL11Q8NHH1 800 aa30.28■■■□□ 2.44
MMP28-203ENST00000612672 MINPP1Q9UNW1 487 aa30.28■■■□□ 2.44
MMP28-203ENST00000612672 HPS5Q9UPZ3 1129 aa30.28■■■□□ 2.44
MMP28-203ENST00000612672 CENPFP49454 3210 aa30.28■■■□□ 2.44
MMP28-203ENST00000612672 TBC1D8O95759 1140 aa30.27■■■□□ 2.44
MMP28-203ENST00000612672 GNAI1P63096 354 aa30.27■■■□□ 2.44
MMP28-203ENST00000612672 MKI67P46013 3256 aaKnown RBP30.27■■■□□ 2.44
MMP28-203ENST00000612672 ZNF296Q8WUU4 475 aaPredicted RBP30.26■■■□□ 2.43
MMP28-203ENST00000612672 A0A1B0GUL6 1792 aa30.26■■■□□ 2.43
MMP28-203ENST00000612672 WNT10BO00744 389 aa30.25■■■□□ 2.43
MMP28-203ENST00000612672 SASH1O94885 1247 aa30.25■■■□□ 2.43
MMP28-203ENST00000612672 KLRK1P26718 216 aa30.25■■■□□ 2.43
MMP28-203ENST00000612672 REM2Q8IYK8 340 aaPredicted RBP30.25■■■□□ 2.43
MMP28-203ENST00000612672 CCT4P50991 539 aaKnown RBP30.24■■■□□ 2.43
MMP28-203ENST00000612672 MKRN3Q13064 507 aaKnown RBP30.24■■■□□ 2.43
MMP28-203ENST00000612672 CWF19L2Q2TBE0 894 aaKnown RBP30.24■■■□□ 2.43
MMP28-203ENST00000612672 CDC5LQ99459 802 aaKnown RBP30.24■■■□□ 2.43
MMP28-203ENST00000612672 BSDC1Q9NW68 430 aaPredicted RBP30.24■■■□□ 2.43
MMP28-203ENST00000612672 PI4KAP2A4QPH2 592 aa30.23■■■□□ 2.43
MMP28-203ENST00000612672 PI4KAP1Q8N8J0 262 aa30.23■■■□□ 2.43
MMP28-203ENST00000612672 BRCA2P51587 3418 aa30.22■■■□□ 2.43
MMP28-203ENST00000612672 FBXW7Q969H0 707 aa30.22■■■□□ 2.43
MMP28-203ENST00000612672 R3HDMLQ9H3Y0 253 aa30.22■■■□□ 2.43
MMP28-203ENST00000612672 DDX58O95786 925 aaKnown RBP30.21■■■□□ 2.43
MMP28-203ENST00000612672 KSR2Q6VAB6 950 aa30.21■■■□□ 2.43
MMP28-203ENST00000612672 CCDC30Q5VVM6 783 aa30.2■■■□□ 2.43
MMP28-203ENST00000612672 G2E3Q7L622 706 aa30.2■■■□□ 2.43
MMP28-203ENST00000612672 PRKRIP1Q9H875 184 aaPredicted RBP30.2■■■□□ 2.43
MMP28-203ENST00000612672 FZD1Q9UP38 647 aa30.2■■■□□ 2.43
MMP28-203ENST00000612672 LAMB1P07942 1786 aa30.19■■■□□ 2.42
MMP28-203ENST00000612672 TM4SF4P48230 202 aa30.19■■■□□ 2.42
MMP28-203ENST00000612672 TTLL12Q14166 644 aaPredicted RBP30.19■■■□□ 2.42
MMP28-203ENST00000612672 TSR2Q969E8 191 aaKnown RBP30.19■■■□□ 2.42
MMP28-203ENST00000612672 ECM29Q5VYK3 1845 aa30.19■■■□□ 2.42
MMP28-203ENST00000612672 NEURL1BA8MQ27 555 aa30.18■■■□□ 2.42
MMP28-203ENST00000612672 PTPN12Q05209 780 aaKnown RBP30.18■■■□□ 2.42
MMP28-203ENST00000612672 STRIP1Q5VSL9 837 aa30.18■■■□□ 2.42
MMP28-203ENST00000612672 SSC5DA1L4H1 1573 aa30.17■■■□□ 2.42
MMP28-203ENST00000612672 PRKG1Q13976 671 aa30.17■■■□□ 2.42
MMP28-203ENST00000612672 ZBED3Q96IU2 234 aaPredicted RBP30.17■■■□□ 2.42
MMP28-203ENST00000612672 COA1Q9GZY4 146 aa30.17■■■□□ 2.42
MMP28-203ENST00000612672 GPR25O00155 361 aa30.16■■■□□ 2.42
MMP28-203ENST00000612672 UBE3BQ7Z3V4 1068 aa30.16■■■□□ 2.42
MMP28-203ENST00000612672 HDAC9Q9UKV0 1011 aa30.16■■■□□ 2.42
MMP28-203ENST00000612672 H7C1W4 665 aa30.15■■■□□ 2.42
MMP28-203ENST00000612672 CALD1Q05682 793 aaKnown RBP30.15■■■□□ 2.42
MMP28-203ENST00000612672 KIAA0825Q8IV33 1275 aa30.15■■■□□ 2.42
MMP28-203ENST00000612672 MYO3BQ8WXR4 1341 aa30.15■■■□□ 2.42
MMP28-203ENST00000612672 CASP7P55210 303 aa30.14■■■□□ 2.42
MMP28-203ENST00000612672 OGFOD1Q8N543 542 aa30.14■■■□□ 2.42
MMP28-203ENST00000612672 PCDHAC2Q9Y5I4 1007 aa30.14■■■□□ 2.42
MMP28-203ENST00000612672 SNAP23O00161 211 aa30.13■■■□□ 2.41
MMP28-203ENST00000612672 PRPF38BQ5VTL8 546 aaKnown RBP30.13■■■□□ 2.41
MMP28-203ENST00000612672 PCDH10Q9P2E7 1040 aa30.13■■■□□ 2.41
MMP28-203ENST00000612672 ZNF804BA4D1E1 1349 aa30.13■■■□□ 2.41
MMP28-203ENST00000612672 IRS2Q9Y4H2 1338 aa30.13■■■□□ 2.41
MMP28-203ENST00000612672 PKN2Q16513 984 aaKnown RBP30.12■■■□□ 2.41
MMP28-203ENST00000612672 TTLL5Q6EMB2 1281 aa30.12■■■□□ 2.41
MMP28-203ENST00000612672 LEMD3Q9Y2U8 911 aa30.12■■■□□ 2.41
MMP28-203ENST00000612672 ITGA6P23229 1130 aa30.11■■■□□ 2.41
MMP28-203ENST00000612672 NOM1Q5C9Z4 860 aaKnown RBP30.11■■■□□ 2.41
MMP28-203ENST00000612672 LDLRAD1Q5T700 205 aa30.11■■■□□ 2.41
MMP28-203ENST00000612672 GTF2IP78347 998 aa30.1■■■□□ 2.41
MMP28-203ENST00000612672 CERS5Q8N5B7 392 aa30.1■■■□□ 2.41
MMP28-203ENST00000612672 CFHR5Q9BXR6 569 aa30.1■■■□□ 2.41
MMP28-203ENST00000612672 AOX1Q06278 1338 aa30.1■■■□□ 2.41
MMP28-203ENST00000612672 NF2P35240 595 aa30.09■■■□□ 2.41
MMP28-203ENST00000612672 IGHMBP2P38935 993 aaKnown RBP30.09■■■□□ 2.41
MMP28-203ENST00000612672 NEXNQ0ZGT2 675 aa30.09■■■□□ 2.41
MMP28-203ENST00000612672 SPRYD7Q5W111 196 aa30.09■■■□□ 2.41
MMP28-203ENST00000612672 APOBEC3FQ8IUX4 373 aaKnown RBP30.09■■■□□ 2.41
MMP28-203ENST00000612672 PLA2G12BQ9BX93 195 aa30.09■■■□□ 2.41
MMP28-203ENST00000612672 OTOFQ9HC10 1997 aa30.08■■■□□ 2.41
MMP28-203ENST00000612672 GCKRQ14397 625 aa30.08■■■□□ 2.41
MMP28-203ENST00000612672 FBXO46Q6PJ61 603 aaPredicted RBP30.08■■■□□ 2.41
MMP28-203ENST00000612672 ANGEL1Q9UNK9 670 aaKnown RBP30.08■■■□□ 2.41
MMP28-203ENST00000612672 SREBF2Q12772 1141 aa30.07■■■□□ 2.4
MMP28-203ENST00000612672 ARMC9Q7Z3E5 817 aa30.07■■■□□ 2.4
MMP28-203ENST00000612672 COL1A1P02452 1464 aaPredicted RBP30.06■■■□□ 2.4
MMP28-203ENST00000612672 CSF1RP07333 972 aa30.06■■■□□ 2.4
MMP28-203ENST00000612672 CHRNDQ07001 517 aa30.06■■■□□ 2.4
MMP28-203ENST00000612672 CLMNQ96JQ2 1002 aa30.06■■■□□ 2.4
MMP28-203ENST00000612672 FKTNO75072 461 aa30.05■■■□□ 2.4
MMP28-203ENST00000612672 CCDC184Q52MB2 194 aa30.05■■■□□ 2.4
MMP28-203ENST00000612672 STK31Q9BXU1 1019 aa30.05■■■□□ 2.4
MMP28-203ENST00000612672 CD209Q9NNX6 404 aa30.05■■■□□ 2.4
MMP28-203ENST00000612672 TWISTNBQ3B726 338 aaPredicted RBP30.04■■■□□ 2.4
MMP28-203ENST00000612672 ANKRD2Q9GZV1 360 aa30.04■■■□□ 2.4
MMP28-203ENST00000612672 DEFB129Q9H1M3 183 aa30.04■■■□□ 2.4
MMP28-203ENST00000612672 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.04■■■□□ 2.4
MMP28-203ENST00000612672 SLC4A2P04920 1241 aa30.03■■■□□ 2.4
MMP28-203ENST00000612672 CACNA1FO60840 1977 aa30.03■■■□□ 2.4
MMP28-203ENST00000612672 IGF2BP3O00425 579 aaKnown RBP eCLIP30.02■■■□□ 2.4
MMP28-203ENST00000612672 TAF5LO75529 589 aa30.02■■■□□ 2.4
MMP28-203ENST00000612672 HELBQ8NG08 1087 aaPredicted RBP30.02■■■□□ 2.4
MMP28-203ENST00000612672 MPHOSPH8Q99549 860 aa30.02■■■□□ 2.4
MMP28-203ENST00000612672 MMP14P50281 582 aa30.01■■■□□ 2.39
MMP28-203ENST00000612672 FLIIQ13045 1269 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms