RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 PLIN1O60240 522 aa22.6■■□□□ 1.21
SEMA3B-211ENST00000612509 RLBP1P12271 317 aa22.6■■□□□ 1.21
SEMA3B-211ENST00000612509 RPS12P25398 132 aaKnown RBP22.6■■□□□ 1.21
SEMA3B-211ENST00000612509 LRRC24Q50LG9 513 aa22.6■■□□□ 1.21
SEMA3B-211ENST00000612509 C15orf52Q6ZUT6 534 aaKnown RBP22.6■■□□□ 1.21
SEMA3B-211ENST00000612509 ADARB2Q9NS39 739 aaKnown RBP22.6■■□□□ 1.21
SEMA3B-211ENST00000612509 VIL1P09327 827 aaKnown RBP22.59■■□□□ 1.21
SEMA3B-211ENST00000612509 MICALL2Q8IY33 904 aa22.59■■□□□ 1.21
SEMA3B-211ENST00000612509 SHTN1A0MZ66 631 aa22.58■■□□□ 1.21
SEMA3B-211ENST00000612509 PTPN12Q05209 780 aaKnown RBP22.58■■□□□ 1.21
SEMA3B-211ENST00000612509 METTL24Q5JXM2 366 aa22.58■■□□□ 1.21
SEMA3B-211ENST00000612509 USP50Q70EL3 339 aaPredicted RBP22.58■■□□□ 1.21
SEMA3B-211ENST00000612509 DPF2Q92785 391 aa22.58■■□□□ 1.21
SEMA3B-211ENST00000612509 RCAN3Q9UKA8 241 aa22.58■■□□□ 1.21
SEMA3B-211ENST00000612509 UBE4AQ14139 1066 aa22.57■■□□□ 1.2
SEMA3B-211ENST00000612509 RSBN1LQ6PCB5 846 aaPredicted RBP22.57■■□□□ 1.2
SEMA3B-211ENST00000612509 ITPRIPQ8IWB1 547 aa22.57■■□□□ 1.2
SEMA3B-211ENST00000612509 VGLL2Q8N8G2 317 aa22.57■■□□□ 1.2
SEMA3B-211ENST00000612509 CNOT7Q9UIV1 285 aaKnown RBP22.57■■□□□ 1.2
SEMA3B-211ENST00000612509 CLEC11AQ9Y240 323 aa22.57■■□□□ 1.2
SEMA3B-211ENST00000612509 USP17L3A6NCW0 530 aa22.56■■□□□ 1.2
SEMA3B-211ENST00000612509 USP17L4A6NCW7 530 aa22.56■■□□□ 1.2
SEMA3B-211ENST00000612509 EYA2O00167 538 aa22.56■■□□□ 1.2
SEMA3B-211ENST00000612509 GNAI2P04899 355 aa22.56■■□□□ 1.2
SEMA3B-211ENST00000612509 USP17L1Q7RTZ2 530 aa22.56■■□□□ 1.2
SEMA3B-211ENST00000612509 MTX1Q13505 466 aa22.55■■□□□ 1.2
SEMA3B-211ENST00000612509 ZNF804AQ7Z570 1209 aa22.55■■□□□ 1.2
SEMA3B-211ENST00000612509 TRPM4Q8TD43 1214 aa22.55■■□□□ 1.2
SEMA3B-211ENST00000612509 FBXW7Q969H0 707 aa22.55■■□□□ 1.2
SEMA3B-211ENST00000612509 CD209Q9NNX6 404 aa22.55■■□□□ 1.2
SEMA3B-211ENST00000612509 H7C1D1 291 aa22.54■■□□□ 1.2
SEMA3B-211ENST00000612509 APLP1P51693 650 aa22.54■■□□□ 1.2
SEMA3B-211ENST00000612509 DACT2Q5SW24 774 aa22.54■■□□□ 1.2
SEMA3B-211ENST00000612509 AGBL3Q8NEM8 1001 aa22.54■■□□□ 1.2
SEMA3B-211ENST00000612509 PANK1Q8TE04 598 aa22.54■■□□□ 1.2
SEMA3B-211ENST00000612509 YTHDC1Q96MU7 727 aaKnown RBP22.54■■□□□ 1.2
SEMA3B-211ENST00000612509 SIL1Q9H173 461 aa22.54■■□□□ 1.2
SEMA3B-211ENST00000612509 FBXO3Q9UK99 471 aa22.54■■□□□ 1.2
SEMA3B-211ENST00000612509 SRGAP3O43295 1099 aa22.53■■□□□ 1.2
SEMA3B-211ENST00000612509 CIAO1O76071 339 aa22.53■■□□□ 1.2
SEMA3B-211ENST00000612509 PDE8BO95263 885 aa22.53■■□□□ 1.2
SEMA3B-211ENST00000612509 STRIP1Q5VSL9 837 aa22.53■■□□□ 1.2
SEMA3B-211ENST00000612509 MAP1SQ66K74 1059 aaPredicted RBP22.53■■□□□ 1.2
SEMA3B-211ENST00000612509 ATG9AQ7Z3C6 839 aa22.53■■□□□ 1.2
SEMA3B-211ENST00000612509 PA2G4Q9UQ80 394 aaKnown RBP22.53■■□□□ 1.2
SEMA3B-211ENST00000612509 ARAP2Q8WZ64 1704 aa22.53■■□□□ 1.2
SEMA3B-211ENST00000612509 GMLQ99445 158 aa22.52■■□□□ 1.2
SEMA3B-211ENST00000612509 COPRSQ9NQ92 184 aa22.52■■□□□ 1.2
SEMA3B-211ENST00000612509 MYO3BQ8WXR4 1341 aa22.52■■□□□ 1.2
SEMA3B-211ENST00000612509 MS4A1P11836 297 aa22.51■■□□□ 1.19
SEMA3B-211ENST00000612509 IL1R1P14778 569 aa22.51■■□□□ 1.19
SEMA3B-211ENST00000612509 PUM3Q15397 648 aaKnown RBP22.51■■□□□ 1.19
SEMA3B-211ENST00000612509 SAMD7Q7Z3H4 446 aa22.51■■□□□ 1.19
SEMA3B-211ENST00000612509 MXD3Q9BW11 206 aa22.51■■□□□ 1.19
SEMA3B-211ENST00000612509 PASKQ96RG2 1323 aa22.51■■□□□ 1.19
SEMA3B-211ENST00000612509 EGFRP00533 1210 aa22.5■■□□□ 1.19
SEMA3B-211ENST00000612509 GYG1P46976 350 aa22.5■■□□□ 1.19
SEMA3B-211ENST00000612509 HIRAP54198 1017 aaPredicted RBP22.5■■□□□ 1.19
SEMA3B-211ENST00000612509 GTF2IP78347 998 aa22.5■■□□□ 1.19
SEMA3B-211ENST00000612509 TBC1D10BQ4KMP7 808 aaPredicted RBP22.5■■□□□ 1.19
SEMA3B-211ENST00000612509 TTLL5Q6EMB2 1281 aa22.5■■□□□ 1.19
SEMA3B-211ENST00000612509 CNTROBQ8N137 903 aa22.5■■□□□ 1.19
SEMA3B-211ENST00000612509 C1orf115Q9H7X2 142 aa22.5■■□□□ 1.19
SEMA3B-211ENST00000612509 ITGBL1O95965 494 aaPredicted RBP22.49■■□□□ 1.19
SEMA3B-211ENST00000612509 FGFR2P21802 821 aa22.49■■□□□ 1.19
SEMA3B-211ENST00000612509 IL15P40933 162 aaPredicted RBP22.49■■□□□ 1.19
SEMA3B-211ENST00000612509 ZNF280AP59817 542 aaPredicted RBP22.49■■□□□ 1.19
SEMA3B-211ENST00000612509 KIF4BQ2VIQ3 1234 aa22.49■■□□□ 1.19
SEMA3B-211ENST00000612509 PNMA6EA0A0J9YXQ4 647 aa22.48■■□□□ 1.19
SEMA3B-211ENST00000612509 ZBTB7BO15156 539 aaPredicted RBP22.48■■□□□ 1.19
SEMA3B-211ENST00000612509 USP17L8P0C7I0 530 aa22.48■■□□□ 1.19
SEMA3B-211ENST00000612509 HIBADHP31937 336 aaKnown RBP22.48■■□□□ 1.19
SEMA3B-211ENST00000612509 FAM84BQ96KN1 310 aaPredicted RBP22.48■■□□□ 1.19
SEMA3B-211ENST00000612509 MYH13Q9UKX3 1938 aa22.47■■□□□ 1.19
SEMA3B-211ENST00000612509 IFIT1P09914 478 aaKnown RBP22.47■■□□□ 1.19
SEMA3B-211ENST00000612509 HTRA3P83110 453 aa22.47■■□□□ 1.19
SEMA3B-211ENST00000612509 ZC3H15Q8WU90 426 aaKnown RBP22.47■■□□□ 1.19
SEMA3B-211ENST00000612509 PGAP2Q9UHJ9 254 aa22.47■■□□□ 1.19
SEMA3B-211ENST00000612509 CEP350Q5VT06 3117 aa22.46■■□□□ 1.19
SEMA3B-211ENST00000612509 TRPM7Q96QT4 1865 aa22.46■■□□□ 1.19
SEMA3B-211ENST00000612509 SLC5A1P13866 664 aa22.46■■□□□ 1.19
SEMA3B-211ENST00000612509 MVPQ14764 893 aaKnown RBP22.46■■□□□ 1.19
SEMA3B-211ENST00000612509 RBM26Q5T8P6 1007 aaKnown RBP22.46■■□□□ 1.19
SEMA3B-211ENST00000612509 TDRD7Q8NHU6 1098 aaKnown RBP22.46■■□□□ 1.19
SEMA3B-211ENST00000612509 LPIN2Q92539 896 aa22.46■■□□□ 1.19
SEMA3B-211ENST00000612509 CEP126Q9P2H0 1117 aa22.46■■□□□ 1.19
SEMA3B-211ENST00000612509 JAG2Q9Y219 1238 aa22.46■■□□□ 1.19
SEMA3B-211ENST00000612509 CAVIN4Q5BKX8 364 aa22.45■■□□□ 1.18
SEMA3B-211ENST00000612509 FBXO33Q7Z6M2 555 aa22.45■■□□□ 1.18
SEMA3B-211ENST00000612509 VPS37DQ86XT2 251 aa22.45■■□□□ 1.18
SEMA3B-211ENST00000612509 MYOZ2Q9NPC6 264 aa22.45■■□□□ 1.18
SEMA3B-211ENST00000612509 FKBP1AP62942 108 aaKnown RBP22.44■■□□□ 1.18
SEMA3B-211ENST00000612509 ATP2B3Q16720 1220 aa22.44■■□□□ 1.18
SEMA3B-211ENST00000612509 FAM205AQ6ZU69 1335 aa22.44■■□□□ 1.18
SEMA3B-211ENST00000612509 KIAA0825Q8IV33 1275 aa22.44■■□□□ 1.18
SEMA3B-211ENST00000612509 CERS5Q8N5B7 392 aa22.44■■□□□ 1.18
SEMA3B-211ENST00000612509 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.44■■□□□ 1.18
SEMA3B-211ENST00000612509 COG6Q9Y2V7 657 aa22.44■■□□□ 1.18
SEMA3B-211ENST00000612509 SASH1O94885 1247 aa22.43■■□□□ 1.18
SEMA3B-211ENST00000612509 POLA2Q14181 598 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms