RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 NOP56O00567 594 aaKnown RBP16.37■□□□□ 0.21
SYNRG-217ENST00000612223 UQCRHP07919 91 aa16.37■□□□□ 0.21
SYNRG-217ENST00000612223 TTC6Q86TZ1 520 aa16.37■□□□□ 0.21
SYNRG-217ENST00000612223 MYCLP12524 364 aaPredicted RBP16.37■□□□□ 0.21
SYNRG-217ENST00000612223 MCM4P33991 863 aa16.37■□□□□ 0.21
SYNRG-217ENST00000612223 KRT79Q5XKE5 535 aa16.37■□□□□ 0.21
SYNRG-217ENST00000612223 ARHGAP27Q6ZUM4 889 aa16.37■□□□□ 0.21
SYNRG-217ENST00000612223 GSTA5Q7RTV2 222 aa16.37■□□□□ 0.21
SYNRG-217ENST00000612223 STX1AQ16623 288 aa16.37■□□□□ 0.21
SYNRG-217ENST00000612223 IFI16Q16666 785 aaKnown RBP16.37■□□□□ 0.21
SYNRG-217ENST00000612223 FCHSD1Q86WN1 690 aa16.37■□□□□ 0.21
SYNRG-217ENST00000612223 RNF34Q969K3 372 aa16.37■□□□□ 0.21
SYNRG-217ENST00000612223 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 SYKP43405 635 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 CHST3Q7LGC8 479 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 MAATS1Q7Z4T9 603 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 PLIN2Q99541 437 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 PLCH2O75038 1416 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 RIMS2Q9UQ26 1411 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 CHMP2AO43633 222 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 AKR1B10O60218 316 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 SH3BP5O60239 455 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 CCDC50Q8IVM0 306 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 NKTRP30414 1462 aaKnown RBP16.36■□□□□ 0.21
SYNRG-217ENST00000612223 TTC12Q9H892 705 aaPredicted RBP16.36■□□□□ 0.21
SYNRG-217ENST00000612223 Q6ZUG5 572 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 PARP1P09874 1014 aaKnown RBP16.36■□□□□ 0.21
SYNRG-217ENST00000612223 NIM1KQ8IY84 436 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 GNAT2P19087 354 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 ARHGEF10LQ9HCE6 1279 aa16.36■□□□□ 0.21
SYNRG-217ENST00000612223 SHTN1A0MZ66 631 aa16.35■□□□□ 0.21
SYNRG-217ENST00000612223 GCP02774 474 aa16.35■□□□□ 0.21
SYNRG-217ENST00000612223 MCM7P33993 719 aa16.35■□□□□ 0.21
SYNRG-217ENST00000612223 HCLS1P14317 486 aaPredicted RBP16.35■□□□□ 0.21
SYNRG-217ENST00000612223 FNBP4Q8N3X1 1017 aaPredicted RBP16.35■□□□□ 0.21
SYNRG-217ENST00000612223 SREK1Q8WXA9 508 aaKnown RBP16.35■□□□□ 0.21
SYNRG-217ENST00000612223 DDX23Q9BUQ8 820 aaKnown RBP16.35■□□□□ 0.21
SYNRG-217ENST00000612223 MCM3P25205 808 aa16.35■□□□□ 0.21
SYNRG-217ENST00000612223 SKAP1Q86WV1 359 aa16.35■□□□□ 0.21
SYNRG-217ENST00000612223 ZKSCAN3Q9BRR0 538 aa16.35■□□□□ 0.21
SYNRG-217ENST00000612223 CWF19L2Q2TBE0 894 aaKnown RBP16.35■□□□□ 0.21
SYNRG-217ENST00000612223 MEIS3Q99687 375 aa16.35■□□□□ 0.21
SYNRG-217ENST00000612223 RTL9Q8NET4 1388 aa16.35■□□□□ 0.21
SYNRG-217ENST00000612223 A0A1W2PRG0 241 aa16.35■□□□□ 0.21
SYNRG-217ENST00000612223 SSFA2P28290 1259 aa16.35■□□□□ 0.21
SYNRG-217ENST00000612223 MARCKSP29966 332 aaPredicted RBP16.35■□□□□ 0.21
SYNRG-217ENST00000612223 TRIM6Q9C030 488 aaPredicted RBP16.35■□□□□ 0.21
SYNRG-217ENST00000612223 DDX19AQ9NUU7 478 aaKnown RBP16.35■□□□□ 0.21
SYNRG-217ENST00000612223 PLCB3Q01970 1234 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 MTHFSDQ2M296 383 aaKnown RBP16.34■□□□□ 0.21
SYNRG-217ENST00000612223 DCAF5Q96JK2 942 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 TFCP2Q12800 502 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 DHX58Q96C10 678 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 PLVAPQ9BX97 442 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 ERICH4A6NGS2 130 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 EIF4A2Q14240 407 aaKnown RBP16.34■□□□□ 0.21
SYNRG-217ENST00000612223 KIF22Q14807 665 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 KRT2P35908 639 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 TCP10Q12799 353 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 SMCR8Q8TEV9 937 aaPredicted RBP16.34■□□□□ 0.21
SYNRG-217ENST00000612223 CEP83Q9Y592 693 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 BRPF3Q9ULD4 1205 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 DENND2AQ9ULE3 1009 aa16.34■□□□□ 0.21
SYNRG-217ENST00000612223 PAIP2Q9BPZ3 127 aaKnown RBP16.33■□□□□ 0.21
SYNRG-217ENST00000612223 ALDH1L1O75891 902 aa16.33■□□□□ 0.21
SYNRG-217ENST00000612223 HIBADHP31937 336 aaKnown RBP16.33■□□□□ 0.21
SYNRG-217ENST00000612223 CCDC63Q8NA47 563 aa16.33■□□□□ 0.21
SYNRG-217ENST00000612223 TBC1D9Q6ZT07 1266 aa16.33■□□□□ 0.2
SYNRG-217ENST00000612223 ZNF526Q8TF50 670 aaPredicted RBP16.33■□□□□ 0.2
SYNRG-217ENST00000612223 RBM8AQ9Y5S9 174 aaKnown RBP16.33■□□□□ 0.2
SYNRG-217ENST00000612223 NSD2O96028 1365 aa16.33■□□□□ 0.2
SYNRG-217ENST00000612223 SCAF11Q99590 1463 aaKnown RBP16.33■□□□□ 0.2
SYNRG-217ENST00000612223 BMP15O95972 392 aa16.33■□□□□ 0.2
SYNRG-217ENST00000612223 RXRAP19793 462 aa16.33■□□□□ 0.2
SYNRG-217ENST00000612223 CCDC169A6NNP5 214 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 H7C1D1 291 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 SUPT20HQ8NEM7 779 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 NACA2Q9H009 215 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.32■□□□□ 0.2
SYNRG-217ENST00000612223 RNF113AO15541 343 aaKnown RBP16.32■□□□□ 0.2
SYNRG-217ENST00000612223 CNGA1P29973 690 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 RNF187Q5TA31 235 aaPredicted RBP16.32■□□□□ 0.2
SYNRG-217ENST00000612223 DPY19L2Q6NUT2 758 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 MSANTD4Q8NCY6 345 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 KIF18AQ8NI77 898 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 ANKRD36BQ8N2N9 1353 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 DDX39AO00148 427 aaKnown RBP16.32■□□□□ 0.2
SYNRG-217ENST00000612223 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.32■□□□□ 0.2
SYNRG-217ENST00000612223 TTC22Q5TAA0 569 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 HS2ST1Q7LGA3 356 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 CDCA7Q9BWT1 371 aaPredicted RBP16.32■□□□□ 0.2
SYNRG-217ENST00000612223 IQCGQ9H095 443 aaKnown RBP16.32■□□□□ 0.2
SYNRG-217ENST00000612223 M0QZ92 97 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 IRX3P78415 501 aaPredicted RBP16.32■□□□□ 0.2
SYNRG-217ENST00000612223 NMIQ13287 307 aaPredicted RBP16.32■□□□□ 0.2
SYNRG-217ENST00000612223 CPXCR1Q8N123 301 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 FAM89AQ96GI7 184 aa16.32■□□□□ 0.2
SYNRG-217ENST00000612223 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 519.7 ms