RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ADAMTSL1Q8N6G6 1762 aa15.42■□□□□ 0.06
CBWD3-208ENST00000612050 TMEM88BA6NKF7 163 aa15.42■□□□□ 0.06
CBWD3-208ENST00000612050 MMP14P50281 582 aa15.42■□□□□ 0.06
CBWD3-208ENST00000612050 ZKSCAN2Q63HK3 967 aa15.42■□□□□ 0.06
CBWD3-208ENST00000612050 ZNF594Q96JF6 807 aaPredicted RBP15.42■□□□□ 0.06
CBWD3-208ENST00000612050 HDAC9Q9UKV0 1011 aa15.42■□□□□ 0.06
CBWD3-208ENST00000612050 PSME4Q14997 1843 aa15.41■□□□□ 0.06
CBWD3-208ENST00000612050 TAF5LO75529 589 aa15.41■□□□□ 0.06
CBWD3-208ENST00000612050 METTL24Q5JXM2 366 aa15.41■□□□□ 0.06
CBWD3-208ENST00000612050 STRIP1Q5VSL9 837 aa15.41■□□□□ 0.06
CBWD3-208ENST00000612050 ATF7IPQ6VMQ6 1270 aa15.41■□□□□ 0.06
CBWD3-208ENST00000612050 VPS37DQ86XT2 251 aa15.41■□□□□ 0.06
CBWD3-208ENST00000612050 FTSJ3Q8IY81 847 aaKnown RBP15.41■□□□□ 0.06
CBWD3-208ENST00000612050 HELBQ8NG08 1087 aaPredicted RBP15.41■□□□□ 0.06
CBWD3-208ENST00000612050 DCPSQ96C86 337 aaKnown RBP15.41■□□□□ 0.06
CBWD3-208ENST00000612050 KLRG1Q96E93 195 aa15.41■□□□□ 0.06
CBWD3-208ENST00000612050 USP17L8P0C7I0 530 aa15.4■□□□□ 0.06
CBWD3-208ENST00000612050 UBE4AQ14139 1066 aa15.4■□□□□ 0.06
CBWD3-208ENST00000612050 KIF4BQ2VIQ3 1234 aa15.4■□□□□ 0.06
CBWD3-208ENST00000612050 RBM26Q5T8P6 1007 aaKnown RBP15.4■□□□□ 0.06
CBWD3-208ENST00000612050 TTLL5Q6EMB2 1281 aa15.4■□□□□ 0.06
CBWD3-208ENST00000612050 CDC37L1Q7L3B6 337 aa15.4■□□□□ 0.06
CBWD3-208ENST00000612050 PASKQ96RG2 1323 aa15.39■□□□□ 0.05
CBWD3-208ENST00000612050 ITGBL1O95965 494 aaPredicted RBP15.39■□□□□ 0.05
CBWD3-208ENST00000612050 TBC1D10BQ4KMP7 808 aaPredicted RBP15.39■□□□□ 0.05
CBWD3-208ENST00000612050 CAVIN4Q5BKX8 364 aa15.39■□□□□ 0.05
CBWD3-208ENST00000612050 INTS3Q68E01 1043 aaKnown RBP15.39■□□□□ 0.05
CBWD3-208ENST00000612050 C15orf52Q6ZUT6 534 aaKnown RBP15.39■□□□□ 0.05
CBWD3-208ENST00000612050 KCNQ5Q9NR82 932 aa15.39■□□□□ 0.05
CBWD3-208ENST00000612050 ABT1Q9ULW3 272 aaKnown RBP15.39■□□□□ 0.05
CBWD3-208ENST00000612050 ZNF609O15014 1411 aa15.39■□□□□ 0.05
CBWD3-208ENST00000612050 A0A1B0GUL6 1792 aa15.39■□□□□ 0.05
CBWD3-208ENST00000612050 SCN9AQ15858 1988 aa15.38■□□□□ 0.05
CBWD3-208ENST00000612050 FRAT2O75474 233 aaPredicted RBP15.38■□□□□ 0.05
CBWD3-208ENST00000612050 BCAR3O75815 825 aa15.38■□□□□ 0.05
CBWD3-208ENST00000612050 HTRA3P83110 453 aa15.38■□□□□ 0.05
CBWD3-208ENST00000612050 SAMD7Q7Z3H4 446 aa15.38■□□□□ 0.05
CBWD3-208ENST00000612050 KAZALD1Q96I82 304 aa15.38■□□□□ 0.05
CBWD3-208ENST00000612050 CD209Q9NNX6 404 aa15.38■□□□□ 0.05
CBWD3-208ENST00000612050 MS4A1P11836 297 aa15.37■□□□□ 0.05
CBWD3-208ENST00000612050 GTF2IP78347 998 aa15.37■□□□□ 0.05
CBWD3-208ENST00000612050 SULF1Q8IWU6 871 aa15.37■□□□□ 0.05
CBWD3-208ENST00000612050 ANKRD44Q8N8A2 993 aa15.37■□□□□ 0.05
CBWD3-208ENST00000612050 TRPM4Q8TD43 1214 aa15.37■□□□□ 0.05
CBWD3-208ENST00000612050 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
CBWD3-208ENST00000612050 TRPM7Q96QT4 1865 aa15.37■□□□□ 0.05
CBWD3-208ENST00000612050 IFIT1P09914 478 aaKnown RBP15.36■□□□□ 0.05
CBWD3-208ENST00000612050 TRIM27P14373 513 aa15.36■□□□□ 0.05
CBWD3-208ENST00000612050 HIBADHP31937 336 aaKnown RBP15.36■□□□□ 0.05
CBWD3-208ENST00000612050 CLUAP1Q96AJ1 413 aa15.36■□□□□ 0.05
CBWD3-208ENST00000612050 MYOZ2Q9NPC6 264 aa15.36■□□□□ 0.05
CBWD3-208ENST00000612050 PGAP2Q9UHJ9 254 aa15.36■□□□□ 0.05
CBWD3-208ENST00000612050 LRRFIP2Q9Y608 721 aaKnown RBP15.36■□□□□ 0.05
CBWD3-208ENST00000612050 PDE8BO95263 885 aa15.35■□□□□ 0.05
CBWD3-208ENST00000612050 DACT2Q5SW24 774 aa15.35■□□□□ 0.05
CBWD3-208ENST00000612050 KRT26Q7Z3Y9 468 aa15.35■□□□□ 0.05
CBWD3-208ENST00000612050 TXNRD3Q86VQ6 643 aa15.35■□□□□ 0.05
CBWD3-208ENST00000612050 DNAJC5GQ8N7S2 189 aa15.35■□□□□ 0.05
CBWD3-208ENST00000612050 RIPOR2Q9Y4F9 1068 aa15.35■□□□□ 0.05
CBWD3-208ENST00000612050 WTIPA6NIX2 430 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-208ENST00000612050 EYA2O00167 538 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 GNAI2P04899 355 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 SLC5A1P13866 664 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 IL1R1P14778 569 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 ZNF280AP59817 542 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-208ENST00000612050 PUM3Q15397 648 aaKnown RBP15.34■□□□□ 0.05
CBWD3-208ENST00000612050 PAXIP1Q6ZW49 1069 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-208ENST00000612050 MEIS3Q99687 375 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 PUS3Q9BZE2 481 aaKnown RBP15.34■□□□□ 0.05
CBWD3-208ENST00000612050 ZNF408Q9H9D4 720 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 MKRN1Q9UHC7 482 aaKnown RBP15.34■□□□□ 0.05
CBWD3-208ENST00000612050 SHTN1A0MZ66 631 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 MYO1BO43795 1136 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 CELF2O95319 508 aaKnown RBP15.34■□□□□ 0.05
CBWD3-208ENST00000612050 KLRK1P26718 216 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 ECE1P42892 770 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 LRRC24Q50LG9 513 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 DZIP1LQ8IYY4 767 aaKnown RBP15.34■□□□□ 0.05
CBWD3-208ENST00000612050 GLIS2Q9BZE0 524 aaPredicted RBP15.34■□□□□ 0.05
CBWD3-208ENST00000612050 GGA3Q9NZ52 723 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 CEP126Q9P2H0 1117 aa15.34■□□□□ 0.05
CBWD3-208ENST00000612050 CIAO1O76071 339 aa15.33■□□□□ 0.04
CBWD3-208ENST00000612050 HIRAP54198 1017 aaPredicted RBP15.33■□□□□ 0.04
CBWD3-208ENST00000612050 FKBP1AP62942 108 aaKnown RBP15.33■□□□□ 0.04
CBWD3-208ENST00000612050 SCARF1Q14162 830 aa15.33■□□□□ 0.04
CBWD3-208ENST00000612050 KIAA0825Q8IV33 1275 aa15.33■□□□□ 0.04
CBWD3-208ENST00000612050 ITPRIPQ8IWB1 547 aa15.33■□□□□ 0.04
CBWD3-208ENST00000612050 KLHDC4Q8TBB5 520 aa15.33■□□□□ 0.04
CBWD3-208ENST00000612050 GMLQ99445 158 aa15.33■□□□□ 0.04
CBWD3-208ENST00000612050 SIL1Q9H173 461 aa15.33■□□□□ 0.04
CBWD3-208ENST00000612050 CNTNAP1P78357 1384 aa15.32■□□□□ 0.04
CBWD3-208ENST00000612050 SNAP23O00161 211 aa15.32■□□□□ 0.04
CBWD3-208ENST00000612050 TRAF5O00463 557 aa15.32■□□□□ 0.04
CBWD3-208ENST00000612050 SRGAP3O43295 1099 aa15.32■□□□□ 0.04
CBWD3-208ENST00000612050 SASH1O94885 1247 aa15.32■□□□□ 0.04
CBWD3-208ENST00000612050 IL15P40933 162 aaPredicted RBP15.32■□□□□ 0.04
CBWD3-208ENST00000612050 PTPN12Q05209 780 aaKnown RBP15.32■□□□□ 0.04
CBWD3-208ENST00000612050 USP48Q86UV5 1035 aa15.32■□□□□ 0.04
CBWD3-208ENST00000612050 PITPNM2Q9BZ72 1349 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms