RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 MINPP1Q9UNW1 487 aa17.11■□□□□ 0.33
HMGB1P24-201ENST00000611897 SALL2Q9Y467 1007 aaPredicted RBP17.11■□□□□ 0.33
HMGB1P24-201ENST00000611897 MED23Q9ULK4 1368 aa17.11■□□□□ 0.33
HMGB1P24-201ENST00000611897 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
HMGB1P24-201ENST00000611897 IGHMBP2P38935 993 aaKnown RBP17.1■□□□□ 0.33
HMGB1P24-201ENST00000611897 CCT4P50991 539 aaKnown RBP17.1■□□□□ 0.33
HMGB1P24-201ENST00000611897 PRAMEF18Q5VWM3 479 aa17.1■□□□□ 0.33
HMGB1P24-201ENST00000611897 MOB2Q70IA6 237 aa17.1■□□□□ 0.33
HMGB1P24-201ENST00000611897 PODNQ7Z5L7 613 aa17.1■□□□□ 0.33
HMGB1P24-201ENST00000611897 ZNF609O15014 1411 aa17.1■□□□□ 0.33
HMGB1P24-201ENST00000611897 FKBP5Q13451 457 aaPredicted RBP17.09■□□□□ 0.33
HMGB1P24-201ENST00000611897 GMLQ99445 158 aa17.09■□□□□ 0.33
HMGB1P24-201ENST00000611897 BSDC1Q9NW68 430 aaPredicted RBP17.09■□□□□ 0.33
HMGB1P24-201ENST00000611897 RNF186Q9NXI6 227 aa17.09■□□□□ 0.33
HMGB1P24-201ENST00000611897 SASH1O94885 1247 aa17.08■□□□□ 0.32
HMGB1P24-201ENST00000611897 KCNJ4P48050 445 aa17.08■□□□□ 0.32
HMGB1P24-201ENST00000611897 NBPF9Q3BBW0 867 aa17.08■□□□□ 0.32
HMGB1P24-201ENST00000611897 RASAL3Q86YV0 1011 aa17.08■□□□□ 0.32
HMGB1P24-201ENST00000611897 WWC1Q8IX03 1113 aa17.08■□□□□ 0.32
HMGB1P24-201ENST00000611897 OGFOD1Q8N543 542 aa17.08■□□□□ 0.32
HMGB1P24-201ENST00000611897 ZNF646O15015 1829 aaPredicted RBP17.07■□□□□ 0.32
HMGB1P24-201ENST00000611897 ITGA6P23229 1130 aa17.07■□□□□ 0.32
HMGB1P24-201ENST00000611897 KLRK1P26718 216 aa17.07■□□□□ 0.32
HMGB1P24-201ENST00000611897 FLIIQ13045 1269 aa17.07■□□□□ 0.32
HMGB1P24-201ENST00000611897 DACT2Q5SW24 774 aa17.07■□□□□ 0.32
HMGB1P24-201ENST00000611897 TXNRD3Q86VQ6 643 aa17.07■□□□□ 0.32
HMGB1P24-201ENST00000611897 MPHOSPH8Q99549 860 aa17.07■□□□□ 0.32
HMGB1P24-201ENST00000611897 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.07■□□□□ 0.32
HMGB1P24-201ENST00000611897 PITPNM2Q9BZ72 1349 aa17.06■□□□□ 0.32
HMGB1P24-201ENST00000611897 FANCIQ9NVI1 1328 aa17.06■□□□□ 0.32
HMGB1P24-201ENST00000611897 UBE2Q2LH0YL09 131 aa17.06■□□□□ 0.32
HMGB1P24-201ENST00000611897 MKRN3Q13064 507 aaKnown RBP17.06■□□□□ 0.32
HMGB1P24-201ENST00000611897 GCKRQ14397 625 aa17.06■□□□□ 0.32
HMGB1P24-201ENST00000611897 KIAA0825Q8IV33 1275 aa17.06■□□□□ 0.32
HMGB1P24-201ENST00000611897 CSRNP1Q96S65 589 aa17.06■□□□□ 0.32
HMGB1P24-201ENST00000611897 MYH16Q9H6N6 1097 aa17.06■□□□□ 0.32
HMGB1P24-201ENST00000611897 SAGE1Q9NXZ1 904 aa17.06■□□□□ 0.32
HMGB1P24-201ENST00000611897 CHMP3Q9Y3E7 222 aa17.06■□□□□ 0.32
HMGB1P24-201ENST00000611897 ZNF804BA4D1E1 1349 aa17.05■□□□□ 0.32
HMGB1P24-201ENST00000611897 H7C1W4 665 aa17.05■□□□□ 0.32
HMGB1P24-201ENST00000611897 PRKG1Q13976 671 aa17.05■□□□□ 0.32
HMGB1P24-201ENST00000611897 DNAAF4Q8WXU2 420 aa17.05■□□□□ 0.32
HMGB1P24-201ENST00000611897 COA1Q9GZY4 146 aa17.05■□□□□ 0.32
HMGB1P24-201ENST00000611897 MRS2Q9HD23 443 aa17.05■□□□□ 0.32
HMGB1P24-201ENST00000611897 MYO3BQ8WXR4 1341 aa17.04■□□□□ 0.32
HMGB1P24-201ENST00000611897 NF2P35240 595 aa17.04■□□□□ 0.32
HMGB1P24-201ENST00000611897 SOX10P56693 466 aa17.04■□□□□ 0.32
HMGB1P24-201ENST00000611897 FKBP1BP68106 108 aa17.04■□□□□ 0.32
HMGB1P24-201ENST00000611897 GTF2IP78347 998 aa17.04■□□□□ 0.32
HMGB1P24-201ENST00000611897 LEMD3Q9Y2U8 911 aa17.04■□□□□ 0.32
HMGB1P24-201ENST00000611897 CACNA1FO60840 1977 aa17.04■□□□□ 0.32
HMGB1P24-201ENST00000611897 WNT10BO00744 389 aa17.03■□□□□ 0.32
HMGB1P24-201ENST00000611897 CCDC27Q2M243 656 aa17.03■□□□□ 0.32
HMGB1P24-201ENST00000611897 STRIP1Q5VSL9 837 aa17.03■□□□□ 0.32
HMGB1P24-201ENST00000611897 TTLL5Q6EMB2 1281 aa17.03■□□□□ 0.32
HMGB1P24-201ENST00000611897 ANKRD2Q9GZV1 360 aa17.03■□□□□ 0.32
HMGB1P24-201ENST00000611897 PDE4DIPQ5VU43 2346 aa17.03■□□□□ 0.32
HMGB1P24-201ENST00000611897 SNAP23O00161 211 aa17.02■□□□□ 0.32
HMGB1P24-201ENST00000611897 CHRNDQ07001 517 aa17.02■□□□□ 0.32
HMGB1P24-201ENST00000611897 HELBQ8NG08 1087 aaPredicted RBP17.02■□□□□ 0.32
HMGB1P24-201ENST00000611897 LINS1Q8NG48 757 aa17.02■□□□□ 0.32
HMGB1P24-201ENST00000611897 HDAC9Q9UKV0 1011 aa17.02■□□□□ 0.32
HMGB1P24-201ENST00000611897 A0A1B0GUL6 1792 aa17.02■□□□□ 0.31
HMGB1P24-201ENST00000611897 IL16Q14005 1332 aa17.01■□□□□ 0.31
HMGB1P24-201ENST00000611897 ANKRD18BA2A2Z9 1011 aa17.01■□□□□ 0.31
HMGB1P24-201ENST00000611897 F6X3S4 739 aa17.01■□□□□ 0.31
HMGB1P24-201ENST00000611897 PLA2G12BQ9BX93 195 aa17.01■□□□□ 0.31
HMGB1P24-201ENST00000611897 JAG2Q9Y219 1238 aa17.01■□□□□ 0.31
HMGB1P24-201ENST00000611897 F8W031 263 aaPredicted RBP17■□□□□ 0.31
HMGB1P24-201ENST00000611897 TAF5LO75529 589 aa17■□□□□ 0.31
HMGB1P24-201ENST00000611897 TBC1D8O95759 1140 aa17■□□□□ 0.31
HMGB1P24-201ENST00000611897 RGS19P49795 217 aa17■□□□□ 0.31
HMGB1P24-201ENST00000611897 CASP7P55210 303 aa17■□□□□ 0.31
HMGB1P24-201ENST00000611897 EXOSC9Q06265 439 aaKnown RBP17■□□□□ 0.31
HMGB1P24-201ENST00000611897 TAF7LQ5H9L4 462 aa17■□□□□ 0.31
HMGB1P24-201ENST00000611897 CTU1Q7Z7A3 348 aaKnown RBP17■□□□□ 0.31
HMGB1P24-201ENST00000611897 PLIN1O60240 522 aa16.99■□□□□ 0.31
HMGB1P24-201ENST00000611897 IFIT5Q13325 482 aaKnown RBP16.99■□□□□ 0.31
HMGB1P24-201ENST00000611897 APOBEC3FQ8IUX4 373 aaKnown RBP16.99■□□□□ 0.31
HMGB1P24-201ENST00000611897 FZD1Q9UP38 647 aa16.99■□□□□ 0.31
HMGB1P24-201ENST00000611897 CSF1RP07333 972 aa16.98■□□□□ 0.31
HMGB1P24-201ENST00000611897 DLGAP5Q15398 846 aa16.98■□□□□ 0.31
HMGB1P24-201ENST00000611897 ARMC9Q7Z3E5 817 aa16.98■□□□□ 0.31
HMGB1P24-201ENST00000611897 REM2Q8IYK8 340 aaPredicted RBP16.98■□□□□ 0.31
HMGB1P24-201ENST00000611897 CD209Q9NNX6 404 aa16.98■□□□□ 0.31
HMGB1P24-201ENST00000611897 ANGEL1Q9UNK9 670 aaKnown RBP16.98■□□□□ 0.31
HMGB1P24-201ENST00000611897 ANP32CO43423 234 aa16.97■□□□□ 0.31
HMGB1P24-201ENST00000611897 VAMP4O75379 141 aa16.97■□□□□ 0.31
HMGB1P24-201ENST00000611897 ZNF804AQ7Z570 1209 aa16.97■□□□□ 0.31
HMGB1P24-201ENST00000611897 ECM29Q5VYK3 1845 aa16.96■□□□□ 0.31
HMGB1P24-201ENST00000611897 CLRN2A0PK11 232 aa16.96■□□□□ 0.31
HMGB1P24-201ENST00000611897 PTPN12Q05209 780 aaKnown RBP16.96■□□□□ 0.31
HMGB1P24-201ENST00000611897 SLC4A10Q6U841 1118 aa16.96■□□□□ 0.31
HMGB1P24-201ENST00000611897 LMBR1LQ6UX01 489 aa16.96■□□□□ 0.31
HMGB1P24-201ENST00000611897 ZNF296Q8WUU4 475 aaPredicted RBP16.96■□□□□ 0.31
HMGB1P24-201ENST00000611897 ZNF594Q96JF6 807 aaPredicted RBP16.96■□□□□ 0.31
HMGB1P24-201ENST00000611897 VEZTQ9HBM0 779 aa16.96■□□□□ 0.31
HMGB1P24-201ENST00000611897 PCDHAC2Q9Y5I4 1007 aa16.96■□□□□ 0.31
HMGB1P24-201ENST00000611897 TNRC18O15417 2968 aaPredicted RBP16.96■□□□□ 0.31
HMGB1P24-201ENST00000611897 RBM5P52756 815 aaKnown RBP eCLIP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms