RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 TIMM10P62072 90 aa14.29□□□□□ -0.12
CDH1-212ENST00000611625 SPA17Q15506 151 aa14.29□□□□□ -0.12
CDH1-212ENST00000611625 LLPHQ9BRT6 129 aaKnown RBP14.29□□□□□ -0.12
CDH1-212ENST00000611625 CNNM2Q9H8M5 875 aa14.29□□□□□ -0.12
CDH1-212ENST00000611625 ZNF500O60304 480 aaPredicted RBP14.29□□□□□ -0.12
CDH1-212ENST00000611625 ME3Q16798 604 aa14.29□□□□□ -0.12
CDH1-212ENST00000611625 A0A1B0GVL5 298 aa14.28□□□□□ -0.12
CDH1-212ENST00000611625 FKBP15Q5T1M5 1219 aa14.28□□□□□ -0.12
CDH1-212ENST00000611625 DZIP1Q86YF9 867 aaKnown RBP14.28□□□□□ -0.12
CDH1-212ENST00000611625 MYRIPQ8NFW9 859 aa14.28□□□□□ -0.12
CDH1-212ENST00000611625 ZNF287Q9HBT7 754 aa14.28□□□□□ -0.12
CDH1-212ENST00000611625 PTH1RQ03431 593 aa14.28□□□□□ -0.12
CDH1-212ENST00000611625 TSPYL1Q9H0U9 437 aa14.28□□□□□ -0.12
CDH1-212ENST00000611625 TUBB4AP04350 444 aa14.27□□□□□ -0.12
CDH1-212ENST00000611625 TMTC2Q8N394 836 aa14.27□□□□□ -0.12
CDH1-212ENST00000611625 METP08581 1390 aa14.27□□□□□ -0.12
CDH1-212ENST00000611625 GOLGA6L10A6NI86 522 aa14.27□□□□□ -0.12
CDH1-212ENST00000611625 NUTM2BA6NNL0 878 aaPredicted RBP14.27□□□□□ -0.12
CDH1-212ENST00000611625 NUTM2EB1AL46 878 aaPredicted RBP14.27□□□□□ -0.12
CDH1-212ENST00000611625 MAP9Q49MG5 647 aa14.27□□□□□ -0.12
CDH1-212ENST00000611625 UNC5CLQ8IV45 518 aa14.27□□□□□ -0.12
CDH1-212ENST00000611625 NUTM2AQ8IVF1 878 aaPredicted RBP14.27□□□□□ -0.12
CDH1-212ENST00000611625 CDC5LQ99459 802 aaKnown RBP14.27□□□□□ -0.12
CDH1-212ENST00000611625 CFAP74Q9C0B2 1584 aa14.27□□□□□ -0.12
CDH1-212ENST00000611625 ZSWIM4Q9H7M6 989 aa14.27□□□□□ -0.12
CDH1-212ENST00000611625 GCKRQ14397 625 aa14.27□□□□□ -0.13
CDH1-212ENST00000611625 SEC63Q9UGP8 760 aaKnown RBP14.27□□□□□ -0.13
CDH1-212ENST00000611625 EYA2O00167 538 aa14.27□□□□□ -0.13
CDH1-212ENST00000611625 N4BP3O15049 544 aa14.27□□□□□ -0.13
CDH1-212ENST00000611625 ZNF75DP51815 510 aa14.27□□□□□ -0.13
CDH1-212ENST00000611625 KBTBD3Q8NAB2 608 aa14.27□□□□□ -0.13
CDH1-212ENST00000611625 CABLES1Q8TDN4 633 aa14.27□□□□□ -0.13
CDH1-212ENST00000611625 PYM1Q9BRP8 204 aaKnown RBP14.27□□□□□ -0.13
CDH1-212ENST00000611625 CALCOCO1Q9P1Z2 691 aa14.27□□□□□ -0.13
CDH1-212ENST00000611625 MTMR6Q9Y217 621 aa14.27□□□□□ -0.13
CDH1-212ENST00000611625 POTEB2H3BUK9 544 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 JAK2O60674 1132 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 NCOA5Q9HCD5 579 aaKnown RBP14.26□□□□□ -0.13
CDH1-212ENST00000611625 EXOC5O00471 708 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 BEND3Q5T5X7 828 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 A0A1B0GUL7 405 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 KCNQ3O43525 872 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 BMP15O95972 392 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 AFMP43652 599 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 PLBD2Q8NHP8 589 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 NDUFB9Q9Y6M9 179 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 SLC4A4Q9Y6R1 1079 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 CDK12Q9NYV4 1490 aaPredicted RBP14.26□□□□□ -0.13
CDH1-212ENST00000611625 CUL4AQ13619 759 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 MEX3CQ5U5Q3 659 aaKnown RBP14.26□□□□□ -0.13
CDH1-212ENST00000611625 ESR2Q92731 530 aa14.26□□□□□ -0.13
CDH1-212ENST00000611625 PATL2C9JE40 543 aaKnown RBP14.25□□□□□ -0.13
CDH1-212ENST00000611625 RIOK3O14730 519 aaKnown RBP14.25□□□□□ -0.13
CDH1-212ENST00000611625 KIF5BP33176 963 aa14.25□□□□□ -0.13
CDH1-212ENST00000611625 ZNF444Q8N0Y2 327 aaPredicted RBP14.25□□□□□ -0.13
CDH1-212ENST00000611625 UBA7P41226 1012 aa14.25□□□□□ -0.13
CDH1-212ENST00000611625 EAF2Q96CJ1 260 aaPredicted RBP14.25□□□□□ -0.13
CDH1-212ENST00000611625 POLR1AO95602 1720 aaPredicted RBP14.25□□□□□ -0.13
CDH1-212ENST00000611625 SPHKAPQ2M3C7 1700 aa14.25□□□□□ -0.13
CDH1-212ENST00000611625 GTF2F1P35269 517 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDH1-212ENST00000611625 ZSWIM6Q9HCJ5 1215 aa14.25□□□□□ -0.13
CDH1-212ENST00000611625 TSPY2A6NKD2 308 aa14.25□□□□□ -0.13
CDH1-212ENST00000611625 MCM3P25205 808 aa14.25□□□□□ -0.13
CDH1-212ENST00000611625 RASEFQ8IZ41 740 aa14.25□□□□□ -0.13
CDH1-212ENST00000611625 SRRTQ9BXP5 876 aaKnown RBP14.25□□□□□ -0.13
CDH1-212ENST00000611625 RXRAP19793 462 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 CYP7A1P22680 504 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 EDC3Q96F86 508 aaKnown RBP14.24□□□□□ -0.13
CDH1-212ENST00000611625 LSG1Q9H089 658 aaKnown RBP14.24□□□□□ -0.13
CDH1-212ENST00000611625 A0A0D9SFI3 127 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 GIGYF1O75420 1035 aaPredicted RBP14.24□□□□□ -0.13
CDH1-212ENST00000611625 KIAA0754O94854 1291 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 LTKP29376 864 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 MTIF2P46199 727 aaKnown RBP14.24□□□□□ -0.13
CDH1-212ENST00000611625 NAA16Q6N069 864 aaPredicted RBP14.24□□□□□ -0.13
CDH1-212ENST00000611625 SYT10Q6XYQ8 523 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 TAF4BQ92750 862 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 LAMC1P11047 1609 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 TRIM75PA6NK02 468 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 ERLIN2O94905 339 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 ATP5JP18859 108 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 SYCP1Q15431 976 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 CACNA2D4Q7Z3S7 1137 aa14.24□□□□□ -0.13
CDH1-212ENST00000611625 MYL5Q02045 173 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 CTAGE1Q96RT6 745 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 CENPHQ9H3R5 247 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 TPCN1Q9ULQ1 816 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 IGSF1Q8N6C5 1336 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 USO1O60763 962 aaKnown RBP14.23□□□□□ -0.13
CDH1-212ENST00000611625 LIG1P18858 919 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 PDE4BQ07343 736 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 CCDC152Q4G0S7 254 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 SLC52A2Q9HAB3 445 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 TCP11L1Q9NUJ3 509 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 IQSEC3Q9UPP2 1182 aaPredicted RBP14.23□□□□□ -0.13
CDH1-212ENST00000611625 ELP1O95163 1332 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 ABCC3O15438 1527 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 SPAG1Q07617 926 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 GTF3C6Q969F1 213 aa14.23□□□□□ -0.13
CDH1-212ENST00000611625 RAB34Q9BZG1 259 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms