RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 TTLL11Q8NHH1 800 aa18.89■□□□□ 0.62
RTN1-209ENST00000611068 TSPY26PQ9H489 355 aa18.89■□□□□ 0.62
RTN1-209ENST00000611068 CALCOCO1Q9P1Z2 691 aa18.89■□□□□ 0.62
RTN1-209ENST00000611068 GOLGB1Q14789 3259 aaKnown RBP18.89■□□□□ 0.61
RTN1-209ENST00000611068 ERVV-1B6SEH8 477 aa18.89■□□□□ 0.61
RTN1-209ENST00000611068 SLFNL1Q499Z3 407 aa18.89■□□□□ 0.61
RTN1-209ENST00000611068 HELBQ8NG08 1087 aaPredicted RBP18.89■□□□□ 0.61
RTN1-209ENST00000611068 PALD1Q9ULE6 856 aa18.89■□□□□ 0.61
RTN1-209ENST00000611068 AOX1Q06278 1338 aa18.89■□□□□ 0.61
RTN1-209ENST00000611068 FAM227BQ96M60 508 aa18.88■□□□□ 0.61
RTN1-209ENST00000611068 MORC2Q9Y6X9 1032 aaPredicted RBP18.88■□□□□ 0.61
RTN1-209ENST00000611068 COL15A1P39059 1388 aa18.88■□□□□ 0.61
RTN1-209ENST00000611068 ZDHHC9Q9Y397 364 aa18.88■□□□□ 0.61
RTN1-209ENST00000611068 TRIM37O94972 964 aa18.87■□□□□ 0.61
RTN1-209ENST00000611068 CTSWP56202 376 aa18.87■□□□□ 0.61
RTN1-209ENST00000611068 SNAP23O00161 211 aa18.87■□□□□ 0.61
RTN1-209ENST00000611068 CHAF1AQ13111 956 aaPredicted RBP18.87■□□□□ 0.61
RTN1-209ENST00000611068 LDHAL6AQ6ZMR3 332 aa18.87■□□□□ 0.61
RTN1-209ENST00000611068 NOL8Q76FK4 1167 aaKnown RBP18.87■□□□□ 0.61
RTN1-209ENST00000611068 FSD1Q9BTV5 496 aa18.87■□□□□ 0.61
RTN1-209ENST00000611068 SEC31BQ9NQW1 1179 aa18.87■□□□□ 0.61
RTN1-209ENST00000611068 PYCARDQ9ULZ3 195 aa18.87■□□□□ 0.61
RTN1-209ENST00000611068 ADORA1P30542 326 aa18.87■□□□□ 0.61
RTN1-209ENST00000611068 FOXD4L5Q5VV16 416 aaPredicted RBP18.87■□□□□ 0.61
RTN1-209ENST00000611068 USPL1Q5W0Q7 1092 aa18.87■□□□□ 0.61
RTN1-209ENST00000611068 DDX46Q7L014 1031 aaKnown RBP18.87■□□□□ 0.61
RTN1-209ENST00000611068 FOXD4L4Q8WXT5 416 aaPredicted RBP18.87■□□□□ 0.61
RTN1-209ENST00000611068 NUP98P52948 1817 aa18.86■□□□□ 0.61
RTN1-209ENST00000611068 A0A1B0GUL7 405 aa18.86■□□□□ 0.61
RTN1-209ENST00000611068 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
RTN1-209ENST00000611068 PSEN1P49768 467 aa18.86■□□□□ 0.61
RTN1-209ENST00000611068 MMP14P50281 582 aa18.86■□□□□ 0.61
RTN1-209ENST00000611068 ST7Q9NRC1 585 aa18.86■□□□□ 0.61
RTN1-209ENST00000611068 SNRKQ9NRH2 765 aa18.86■□□□□ 0.61
RTN1-209ENST00000611068 CNNM1Q9NRU3 951 aa18.86■□□□□ 0.61
RTN1-209ENST00000611068 KCNG1Q9UIX4 513 aa18.86■□□□□ 0.61
RTN1-209ENST00000611068 USP42Q9H9J4 1324 aaKnown RBP18.86■□□□□ 0.61
RTN1-209ENST00000611068 ADCY5O95622 1261 aa18.86■□□□□ 0.61
RTN1-209ENST00000611068 IL15P40933 162 aaPredicted RBP18.86■□□□□ 0.61
RTN1-209ENST00000611068 ZGPATQ8N5A5 531 aaKnown RBP18.86■□□□□ 0.61
RTN1-209ENST00000611068 KIF18AQ8NI77 898 aa18.86■□□□□ 0.61
RTN1-209ENST00000611068 UTP14AQ9BVJ6 771 aaKnown RBP18.86■□□□□ 0.61
RTN1-209ENST00000611068 CEP126Q9P2H0 1117 aa18.86■□□□□ 0.61
RTN1-209ENST00000611068 CSF1RP07333 972 aa18.85■□□□□ 0.61
RTN1-209ENST00000611068 LRRC4BQ9NT99 713 aa18.85■□□□□ 0.61
RTN1-209ENST00000611068 TBC1D9BQ66K14 1250 aa18.84■□□□□ 0.61
RTN1-209ENST00000611068 KIAA1524Q8TCG1 905 aa18.84■□□□□ 0.61
RTN1-209ENST00000611068 EVI5LQ96CN4 794 aa18.84■□□□□ 0.61
RTN1-209ENST00000611068 ANKRD18BA2A2Z9 1011 aa18.84■□□□□ 0.61
RTN1-209ENST00000611068 PDE8AO60658 829 aa18.84■□□□□ 0.61
RTN1-209ENST00000611068 METTL24Q5JXM2 366 aa18.84■□□□□ 0.61
RTN1-209ENST00000611068 SH3TC1Q8TE82 1336 aa18.84■□□□□ 0.61
RTN1-209ENST00000611068 NMIQ13287 307 aaPredicted RBP18.83■□□□□ 0.61
RTN1-209ENST00000611068 GORABQ5T7V8 394 aa18.83■□□□□ 0.61
RTN1-209ENST00000611068 LOC102724159A0A0B4J2E5 919 aa18.83■□□□□ 0.6
RTN1-209ENST00000611068 SGSM2O43147 1006 aa18.83■□□□□ 0.6
RTN1-209ENST00000611068 ATRNO75882 1429 aa18.83■□□□□ 0.6
RTN1-209ENST00000611068 PTH1RQ03431 593 aa18.83■□□□□ 0.6
RTN1-209ENST00000611068 PWP2Q15269 919 aaKnown RBP18.83■□□□□ 0.6
RTN1-209ENST00000611068 C3orf67Q6ZVT6 689 aa18.83■□□□□ 0.6
RTN1-209ENST00000611068 UPF3BQ9BZI7 483 aaKnown RBP18.83■□□□□ 0.6
RTN1-209ENST00000611068 KCNF1Q9H3M0 494 aa18.83■□□□□ 0.6
RTN1-209ENST00000611068 TUBGCP6Q96RT7 1819 aa18.82■□□□□ 0.6
RTN1-209ENST00000611068 A0A0D9SFI3 127 aa18.82■□□□□ 0.6
RTN1-209ENST00000611068 GOLIM4O00461 696 aa18.82■□□□□ 0.6
RTN1-209ENST00000611068 TAF5LO75529 589 aa18.82■□□□□ 0.6
RTN1-209ENST00000611068 PRR29P0C7W0 189 aa18.82■□□□□ 0.6
RTN1-209ENST00000611068 HNRNPH2P55795 449 aaKnown RBP18.82■□□□□ 0.6
RTN1-209ENST00000611068 ERFEQ4G0M1 354 aa18.82■□□□□ 0.6
RTN1-209ENST00000611068 PI16Q6UXB8 463 aa18.82■□□□□ 0.6
RTN1-209ENST00000611068 ONECUT3O60422 494 aaPredicted RBP18.82■□□□□ 0.6
RTN1-209ENST00000611068 FKBP4Q02790 459 aaKnown RBP eCLIP18.82■□□□□ 0.6
RTN1-209ENST00000611068 KRT222Q8N1A0 295 aa18.82■□□□□ 0.6
RTN1-209ENST00000611068 PLA2G12BQ9BX93 195 aa18.82■□□□□ 0.6
RTN1-209ENST00000611068 CDHR2Q9BYE9 1310 aa18.81■□□□□ 0.6
RTN1-209ENST00000611068 FAM196AQ6ZSG2 479 aa18.81■□□□□ 0.6
RTN1-209ENST00000611068 KRT27Q7Z3Y8 459 aa18.81■□□□□ 0.6
RTN1-209ENST00000611068 ARHGEF1Q92888 912 aaKnown RBP18.81■□□□□ 0.6
RTN1-209ENST00000611068 SEC62Q99442 399 aaKnown RBP18.81■□□□□ 0.6
RTN1-209ENST00000611068 LARP6Q9BRS8 491 aaKnown RBP18.81■□□□□ 0.6
RTN1-209ENST00000611068 TMX1Q9H3N1 280 aa18.81■□□□□ 0.6
RTN1-209ENST00000611068 BTAF1O14981 1849 aa18.81■□□□□ 0.6
RTN1-209ENST00000611068 ATP5JP18859 108 aa18.81■□□□□ 0.6
RTN1-209ENST00000611068 NTSR2O95665 410 aa18.8■□□□□ 0.6
RTN1-209ENST00000611068 NEK4P51957 841 aa18.8■□□□□ 0.6
RTN1-209ENST00000611068 RAD51AP2Q09MP3 1159 aa18.8■□□□□ 0.6
RTN1-209ENST00000611068 CCDC129Q6ZRS4 1044 aa18.8■□□□□ 0.6
RTN1-209ENST00000611068 XAGE2Q96GT9 111 aa18.8■□□□□ 0.6
RTN1-209ENST00000611068 TSPYL1Q9H0U9 437 aa18.8■□□□□ 0.6
RTN1-209ENST00000611068 GEMIN8Q9NWZ8 242 aaKnown RBP18.8■□□□□ 0.6
RTN1-209ENST00000611068 RTCBQ9Y3I0 505 aaKnown RBP18.8■□□□□ 0.6
RTN1-209ENST00000611068 THSD7AQ9UPZ6 1657 aa18.8■□□□□ 0.6
RTN1-209ENST00000611068 ZPR1O75312 459 aa18.8■□□□□ 0.6
RTN1-209ENST00000611068 RIPOR2Q9Y4F9 1068 aa18.8■□□□□ 0.6
RTN1-209ENST00000611068 CPA1P15085 419 aa18.79■□□□□ 0.6
RTN1-209ENST00000611068 YY1AP1Q9H869 796 aa18.79■□□□□ 0.6
RTN1-209ENST00000611068 WTIPA6NIX2 430 aaPredicted RBP18.79■□□□□ 0.6
RTN1-209ENST00000611068 SCARF1Q14162 830 aa18.79■□□□□ 0.6
RTN1-209ENST00000611068 ZNF589Q86UQ0 364 aaPredicted RBP18.79■□□□□ 0.6
RTN1-209ENST00000611068 LSG1Q9H089 658 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms