RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 SRRTQ9BXP5 876 aaKnown RBP13.93□□□□□ -0.18
TP53-220ENST00000610623 USP16Q9Y5T5 823 aa13.93□□□□□ -0.18
TP53-220ENST00000610623 EIF4A1P60842 406 aaKnown RBP13.92□□□□□ -0.18
TP53-220ENST00000610623 HDGFL1Q5TGJ6 251 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 CWC27Q6UX04 472 aaKnown RBP13.92□□□□□ -0.18
TP53-220ENST00000610623 KRBA2Q6ZNG9 492 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 SSH3Q8TE77 659 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 UBXN4Q92575 508 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 AKT1S1Q96B36 256 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 RSPH14Q9UHP6 348 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 PXDNQ92626 1479 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 RNMTO43148 476 aaKnown RBP13.92□□□□□ -0.18
TP53-220ENST00000610623 ZKSCAN1P17029 563 aaPredicted RBP13.92□□□□□ -0.18
TP53-220ENST00000610623 FAM173BQ6P4H8 233 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 NUTM1Q86Y26 1132 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
TP53-220ENST00000610623 NEK11Q8NG66 645 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 PGBD1Q96JS3 809 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 IL1RAPL2Q9NP60 686 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 ORC3Q9UBD5 711 aaPredicted RBP13.92□□□□□ -0.18
TP53-220ENST00000610623 SPG7Q9UQ90 795 aa13.92□□□□□ -0.18
TP53-220ENST00000610623 ANKRD1Q15327 319 aa13.91□□□□□ -0.18
TP53-220ENST00000610623 ADCK5Q3MIX3 580 aa13.91□□□□□ -0.18
TP53-220ENST00000610623 E4F1Q66K89 784 aaPredicted RBP13.91□□□□□ -0.18
TP53-220ENST00000610623 SYT10Q6XYQ8 523 aa13.91□□□□□ -0.18
TP53-220ENST00000610623 NECAB1Q8N987 351 aa13.91□□□□□ -0.18
TP53-220ENST00000610623 PPP1R13BQ96KQ4 1090 aa13.91□□□□□ -0.18
TP53-220ENST00000610623 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
TP53-220ENST00000610623 TFIP11Q9UBB9 837 aaKnown RBP13.91□□□□□ -0.18
TP53-220ENST00000610623 TPCN1Q9ULQ1 816 aa13.91□□□□□ -0.18
TP53-220ENST00000610623 LRRFIP2Q9Y608 721 aaKnown RBP13.91□□□□□ -0.18
TP53-220ENST00000610623 CCP110O43303 1012 aa13.91□□□□□ -0.18
TP53-220ENST00000610623 NRDCO43847 1150 aa13.91□□□□□ -0.18
TP53-220ENST00000610623 MAP4K4O95819 1239 aaPredicted RBP13.91□□□□□ -0.18
TP53-220ENST00000610623 ZSCAN26Q16670 478 aa13.91□□□□□ -0.18
TP53-220ENST00000610623 KRI1Q8N9T8 703 aaKnown RBP13.91□□□□□ -0.18
TP53-220ENST00000610623 CCDC150Q8NCX0 1101 aa13.91□□□□□ -0.18
TP53-220ENST00000610623 PSD3Q9NYI0 1048 aa13.91□□□□□ -0.18
TP53-220ENST00000610623 MYO1CO00159 1063 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 NOP2P46087 812 aaKnown RBP13.9□□□□□ -0.18
TP53-220ENST00000610623 PRPF40BQ6NWY9 871 aaKnown RBP13.9□□□□□ -0.18
TP53-220ENST00000610623 C11orf57Q6ZUT1 292 aaPredicted RBP13.9□□□□□ -0.18
TP53-220ENST00000610623 GPIHBP1Q8IV16 184 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 ANO10Q9NW15 660 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 PHLPP2Q6ZVD8 1323 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 SCN11AQ9UI33 1791 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 BTBD11A6QL63 1104 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 POLR3GO15318 223 aaPredicted RBP13.9□□□□□ -0.18
TP53-220ENST00000610623 PSMA5P28066 241 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 CASQ1P31415 396 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 NECTIN1Q15223 517 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 GOLGA5Q8TBA6 731 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 RHPN1Q8TCX5 695 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 SMARCE1Q969G3 411 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 ALDH8A1Q9H2A2 487 aaPredicted RBP13.9□□□□□ -0.18
TP53-220ENST00000610623 GEMIN8Q9NWZ8 242 aaKnown RBP13.9□□□□□ -0.18
TP53-220ENST00000610623 CFAP45Q9UL16 551 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 AXIN2Q9Y2T1 843 aa13.9□□□□□ -0.18
TP53-220ENST00000610623 USP42Q9H9J4 1324 aaKnown RBP13.89□□□□□ -0.19
TP53-220ENST00000610623 PDE4DQ08499 809 aa13.89□□□□□ -0.19
TP53-220ENST00000610623 CCDC158Q5M9N0 1113 aa13.89□□□□□ -0.19
TP53-220ENST00000610623 DHX40Q8IX18 779 aaKnown RBP13.89□□□□□ -0.19
TP53-220ENST00000610623 NFATC2IPQ8NCF5 419 aa13.89□□□□□ -0.19
TP53-220ENST00000610623 RGS22Q8NE09 1264 aa13.89□□□□□ -0.19
TP53-220ENST00000610623 NAT10Q9H0A0 1025 aaKnown RBP13.89□□□□□ -0.19
TP53-220ENST00000610623 TTC41PQ6P2S7 1318 aa13.89□□□□□ -0.19
TP53-220ENST00000610623 EFCAB8A8MWE9 144 aa13.89□□□□□ -0.19
TP53-220ENST00000610623 KCTD17Q8N5Z5 321 aa13.89□□□□□ -0.19
TP53-220ENST00000610623 STRCQ7RTU9 1775 aa13.88□□□□□ -0.19
TP53-220ENST00000610623 DHX16O60231 1041 aaKnown RBP13.88□□□□□ -0.19
TP53-220ENST00000610623 GLRX3O76003 335 aaKnown RBP13.88□□□□□ -0.19
TP53-220ENST00000610623 ETF1P62495 437 aaKnown RBP13.88□□□□□ -0.19
TP53-220ENST00000610623 ST5P78524 1137 aa13.88□□□□□ -0.19
TP53-220ENST00000610623 PTH1RQ03431 593 aa13.88□□□□□ -0.19
TP53-220ENST00000610623 LARP1Q6PKG0 1096 aaKnown RBP13.88□□□□□ -0.19
TP53-220ENST00000610623 MPRIPQ6WCQ1 1025 aa13.88□□□□□ -0.19
TP53-220ENST00000610623 TEX2Q8IWB9 1127 aa13.88□□□□□ -0.19
TP53-220ENST00000610623 CCDC191Q8NCU4 936 aa13.88□□□□□ -0.19
TP53-220ENST00000610623 LRRN4CLQ8ND94 238 aa13.88□□□□□ -0.19
TP53-220ENST00000610623 FBXO18Q8NFZ0 1043 aa13.88□□□□□ -0.19
TP53-220ENST00000610623 EXOC4Q96A65 974 aa13.88□□□□□ -0.19
TP53-220ENST00000610623 CPDO75976 1380 aa13.88□□□□□ -0.19
TP53-220ENST00000610623 PKD1L3Q7Z443 1732 aa13.87□□□□□ -0.19
TP53-220ENST00000610623 SURF6O75683 361 aaKnown RBP13.87□□□□□ -0.19
TP53-220ENST00000610623 UBTFL1P0CB47 393 aaPredicted RBP13.87□□□□□ -0.19
TP53-220ENST00000610623 ZC3H6P61129 1189 aaKnown RBP13.87□□□□□ -0.19
TP53-220ENST00000610623 CEP57L1Q8IYX8 460 aa13.87□□□□□ -0.19
TP53-220ENST00000610623 GOLGA6L1Q8N7Z2 621 aa13.87□□□□□ -0.19
TP53-220ENST00000610623 IQUBQ8NA54 791 aa13.87□□□□□ -0.19
TP53-220ENST00000610623 MNS1Q8NEH6 495 aa13.87□□□□□ -0.19
TP53-220ENST00000610623 RAPGEF4Q8WZA2 1011 aa13.87□□□□□ -0.19
TP53-220ENST00000610623 FAM117AQ9C073 453 aa13.87□□□□□ -0.19
TP53-220ENST00000610623 ZSCAN16Q9H4T2 348 aaPredicted RBP13.87□□□□□ -0.19
TP53-220ENST00000610623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.19
TP53-220ENST00000610623 SPATA31A3Q5VYP0 1347 aa13.87□□□□□ -0.19
TP53-220ENST00000610623 TRIM66O15016 1216 aa13.87□□□□□ -0.19
TP53-220ENST00000610623 OAS2P29728 719 aaKnown RBP13.87□□□□□ -0.19
TP53-220ENST00000610623 NBPF11Q86T75 865 aa13.87□□□□□ -0.19
TP53-220ENST00000610623 HEG1Q9ULI3 1381 aa13.87□□□□□ -0.19
TP53-220ENST00000610623 DTNBO60941 627 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms