RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 TMEM57Q8N5G2 664 aa16.01■□□□□ 0.15
CD9-212ENST00000610354 SMC1BQ8NDV3 1235 aa16.01■□□□□ 0.15
CD9-212ENST00000610354 LRRFIP2Q9Y608 721 aaKnown RBP16.01■□□□□ 0.15
CD9-212ENST00000610354 VIL1P09327 827 aaKnown RBP16■□□□□ 0.15
CD9-212ENST00000610354 CNNM1Q9NRU3 951 aa16■□□□□ 0.15
CD9-212ENST00000610354 PLIN1O60240 522 aa15.99■□□□□ 0.15
CD9-212ENST00000610354 PTPN12Q05209 780 aaKnown RBP15.99■□□□□ 0.15
CD9-212ENST00000610354 EAPPQ56P03 285 aaPredicted RBP15.99■□□□□ 0.15
CD9-212ENST00000610354 CHADLQ6NUI6 762 aa15.99■□□□□ 0.15
CD9-212ENST00000610354 C15orf52Q6ZUT6 534 aaKnown RBP15.99■□□□□ 0.15
CD9-212ENST00000610354 LMOD1P29536 600 aaPredicted RBP15.98■□□□□ 0.15
CD9-212ENST00000610354 HIRAP54198 1017 aaPredicted RBP15.98■□□□□ 0.15
CD9-212ENST00000610354 LDHDQ86WU2 507 aa15.98■□□□□ 0.15
CD9-212ENST00000610354 CNOT7Q9UIV1 285 aaKnown RBP15.98■□□□□ 0.15
CD9-212ENST00000610354 G3V3G9 751 aa15.97■□□□□ 0.15
CD9-212ENST00000610354 DCAF8Q5TAQ9 597 aa15.97■□□□□ 0.15
CD9-212ENST00000610354 PODNQ7Z5L7 613 aa15.97■□□□□ 0.15
CD9-212ENST00000610354 PNMA8AQ86V59 439 aaPredicted RBP15.97■□□□□ 0.15
CD9-212ENST00000610354 VGLL2Q8N8G2 317 aa15.97■□□□□ 0.15
CD9-212ENST00000610354 DPF2Q92785 391 aa15.97■□□□□ 0.15
CD9-212ENST00000610354 GMLQ99445 158 aa15.97■□□□□ 0.15
CD9-212ENST00000610354 COA1Q9GZY4 146 aa15.97■□□□□ 0.15
CD9-212ENST00000610354 ITGBL1O95965 494 aaPredicted RBP15.96■□□□□ 0.15
CD9-212ENST00000610354 EGFRP00533 1210 aa15.96■□□□□ 0.15
CD9-212ENST00000610354 GNAI3P08754 354 aa15.96■□□□□ 0.15
CD9-212ENST00000610354 KCNJ4P48050 445 aa15.96■□□□□ 0.15
CD9-212ENST00000610354 ATG9AQ7Z3C6 839 aa15.96■□□□□ 0.15
CD9-212ENST00000610354 MICALL2Q8IY33 904 aa15.96■□□□□ 0.15
CD9-212ENST00000610354 DZIP1LQ8IYY4 767 aaKnown RBP15.96■□□□□ 0.15
CD9-212ENST00000610354 TRPM4Q8TD43 1214 aa15.96■□□□□ 0.15
CD9-212ENST00000610354 MXD3Q9BW11 206 aa15.96■□□□□ 0.15
CD9-212ENST00000610354 ADARB2Q9NS39 739 aaKnown RBP15.96■□□□□ 0.15
CD9-212ENST00000610354 POLR2AP24928 1970 aaKnown RBP15.96■□□□□ 0.15
CD9-212ENST00000610354 USP17L3A6NCW0 530 aa15.95■□□□□ 0.14
CD9-212ENST00000610354 USP17L4A6NCW7 530 aa15.95■□□□□ 0.14
CD9-212ENST00000610354 HTRA3P83110 453 aa15.95■□□□□ 0.14
CD9-212ENST00000610354 DACT2Q5SW24 774 aa15.95■□□□□ 0.14
CD9-212ENST00000610354 MAP1SQ66K74 1059 aaPredicted RBP15.95■□□□□ 0.14
CD9-212ENST00000610354 RSBN1LQ6PCB5 846 aaPredicted RBP15.95■□□□□ 0.14
CD9-212ENST00000610354 USP50Q70EL3 339 aaPredicted RBP15.95■□□□□ 0.14
CD9-212ENST00000610354 USP17L1Q7RTZ2 530 aa15.95■□□□□ 0.14
CD9-212ENST00000610354 CD209Q9NNX6 404 aa15.95■□□□□ 0.14
CD9-212ENST00000610354 PA2G4Q9UQ80 394 aaKnown RBP15.95■□□□□ 0.14
CD9-212ENST00000610354 CLEC11AQ9Y240 323 aa15.95■□□□□ 0.14
CD9-212ENST00000610354 MROH5Q6ZUA9 1318 aa15.95■□□□□ 0.14
CD9-212ENST00000610354 ZNF609O15014 1411 aa15.95■□□□□ 0.14
CD9-212ENST00000610354 PASKQ96RG2 1323 aa15.94■□□□□ 0.14
CD9-212ENST00000610354 EYA2O00167 538 aa15.94■□□□□ 0.14
CD9-212ENST00000610354 RPS12P25398 132 aaKnown RBP15.94■□□□□ 0.14
CD9-212ENST00000610354 MTX1Q13505 466 aa15.94■□□□□ 0.14
CD9-212ENST00000610354 UBE4AQ14139 1066 aa15.94■□□□□ 0.14
CD9-212ENST00000610354 SAMD7Q7Z3H4 446 aa15.94■□□□□ 0.14
CD9-212ENST00000610354 PANK1Q8TE04 598 aa15.94■□□□□ 0.14
CD9-212ENST00000610354 RCAN3Q9UKA8 241 aa15.94■□□□□ 0.14
CD9-212ENST00000610354 ZBTB7BO15156 539 aaPredicted RBP15.94■□□□□ 0.14
CD9-212ENST00000610354 FGFR2P21802 821 aa15.94■□□□□ 0.14
CD9-212ENST00000610354 FMR1Q06787 632 aaKnown RBP eCLIP15.94■□□□□ 0.14
CD9-212ENST00000610354 METTL24Q5JXM2 366 aa15.94■□□□□ 0.14
CD9-212ENST00000610354 FAM84BQ96KN1 310 aaPredicted RBP15.94■□□□□ 0.14
CD9-212ENST00000610354 PGAP2Q9UHJ9 254 aa15.94■□□□□ 0.14
CD9-212ENST00000610354 H7C1D1 291 aa15.93■□□□□ 0.14
CD9-212ENST00000610354 PDE8BO95263 885 aa15.93■□□□□ 0.14
CD9-212ENST00000610354 GNAI2P04899 355 aa15.93■□□□□ 0.14
CD9-212ENST00000610354 IL1R1P14778 569 aa15.93■□□□□ 0.14
CD9-212ENST00000610354 GYG1P46976 350 aa15.93■□□□□ 0.14
CD9-212ENST00000610354 APLP1P51693 650 aa15.93■□□□□ 0.14
CD9-212ENST00000610354 TBC1D10BQ4KMP7 808 aaPredicted RBP15.93■□□□□ 0.14
CD9-212ENST00000610354 STRIP1Q5VSL9 837 aa15.93■□□□□ 0.14
CD9-212ENST00000610354 CNTROBQ8N137 903 aa15.93■□□□□ 0.14
CD9-212ENST00000610354 AGBL3Q8NEM8 1001 aa15.93■□□□□ 0.14
CD9-212ENST00000610354 SIL1Q9H173 461 aa15.93■□□□□ 0.14
CD9-212ENST00000610354 COPRSQ9NQ92 184 aa15.93■□□□□ 0.14
CD9-212ENST00000610354 HDAC5Q9UQL6 1122 aa15.93■□□□□ 0.14
CD9-212ENST00000610354 CEP350Q5VT06 3117 aa15.92■□□□□ 0.14
CD9-212ENST00000610354 PNMA6EA0A0J9YXQ4 647 aa15.92■□□□□ 0.14
CD9-212ENST00000610354 ZNF280AP59817 542 aaPredicted RBP15.92■□□□□ 0.14
CD9-212ENST00000610354 GTF2IP78347 998 aa15.92■□□□□ 0.14
CD9-212ENST00000610354 TTLL5Q6EMB2 1281 aa15.92■□□□□ 0.14
CD9-212ENST00000610354 ITPRIPQ8IWB1 547 aa15.92■□□□□ 0.14
CD9-212ENST00000610354 FTSJ3Q8IY81 847 aaKnown RBP15.92■□□□□ 0.14
CD9-212ENST00000610354 CERS5Q8N5B7 392 aa15.92■□□□□ 0.14
CD9-212ENST00000610354 SRGAP3O43295 1099 aa15.91■□□□□ 0.14
CD9-212ENST00000610354 CIAO1O76071 339 aa15.91■□□□□ 0.14
CD9-212ENST00000610354 RBM26Q5T8P6 1007 aaKnown RBP15.91■□□□□ 0.14
CD9-212ENST00000610354 ZNF804AQ7Z570 1209 aa15.91■□□□□ 0.14
CD9-212ENST00000610354 FBXO33Q7Z6M2 555 aa15.91■□□□□ 0.14
CD9-212ENST00000610354 DNAJC5GQ8N7S2 189 aa15.91■□□□□ 0.14
CD9-212ENST00000610354 TDRD7Q8NHU6 1098 aaKnown RBP15.91■□□□□ 0.14
CD9-212ENST00000610354 FBXW7Q969H0 707 aa15.91■□□□□ 0.14
CD9-212ENST00000610354 YTHDC1Q96MU7 727 aaKnown RBP15.91■□□□□ 0.14
CD9-212ENST00000610354 C1orf115Q9H7X2 142 aa15.91■□□□□ 0.14
CD9-212ENST00000610354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.91■□□□□ 0.14
CD9-212ENST00000610354 ASTN2O75129 1339 aaPredicted RBP15.9■□□□□ 0.14
CD9-212ENST00000610354 FBXO3Q9UK99 471 aa15.9■□□□□ 0.14
CD9-212ENST00000610354 JAG2Q9Y219 1238 aa15.9■□□□□ 0.14
CD9-212ENST00000610354 TRPM7Q96QT4 1865 aa15.89■□□□□ 0.13
CD9-212ENST00000610354 TRAF5O00463 557 aa15.89■□□□□ 0.13
CD9-212ENST00000610354 USP17L8P0C7I0 530 aa15.89■□□□□ 0.13
CD9-212ENST00000610354 HIBADHP31937 336 aaKnown RBP15.89■□□□□ 0.13
CD9-212ENST00000610354 POLA2Q14181 598 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms