RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 HIF3AQ9Y2N7 669 aa7.17□□□□□ -1.26
CCDC144B-206ENST00000609959 BEND4Q6ZU67 534 aa7.16□□□□□ -1.26
CCDC144B-206ENST00000609959 NCAPG2Q86XI2 1143 aa7.16□□□□□ -1.26
CCDC144B-206ENST00000609959 WNT8BQ93098 351 aa7.16□□□□□ -1.26
CCDC144B-206ENST00000609959 PRIMPOLQ96LW4 560 aa7.16□□□□□ -1.26
CCDC144B-206ENST00000609959 CARD10Q9BWT7 1032 aa7.16□□□□□ -1.26
CCDC144B-206ENST00000609959 PBX4Q9BYU1 374 aa7.16□□□□□ -1.26
CCDC144B-206ENST00000609959 RASSF4Q9H2L5 321 aa7.16□□□□□ -1.26
CCDC144B-206ENST00000609959 ABI2Q9NYB9 513 aaPredicted RBP7.16□□□□□ -1.26
CCDC144B-206ENST00000609959 KCNK4Q9NYG8 393 aa7.16□□□□□ -1.26
CCDC144B-206ENST00000609959 ACIN1Q9UKV3 1341 aaKnown RBP7.16□□□□□ -1.26
CCDC144B-206ENST00000609959 PRR19A6NJB7 356 aa7.15□□□□□ -1.26
CCDC144B-206ENST00000609959 KIF4AO95239 1232 aa7.15□□□□□ -1.26
CCDC144B-206ENST00000609959 BMP3P12645 472 aa7.15□□□□□ -1.26
CCDC144B-206ENST00000609959 RNF208Q9H0X6 261 aa7.15□□□□□ -1.26
CCDC144B-206ENST00000609959 OSGEPQ9NPF4 335 aa7.15□□□□□ -1.26
CCDC144B-206ENST00000609959 PRMT3O60678 531 aa7.14□□□□□ -1.27
CCDC144B-206ENST00000609959 ZAP70P43403 619 aa7.14□□□□□ -1.27
CCDC144B-206ENST00000609959 ARL4DP49703 201 aa7.14□□□□□ -1.27
CCDC144B-206ENST00000609959 PIP4K2BP78356 416 aa7.14□□□□□ -1.27
CCDC144B-206ENST00000609959 COL13A1Q5TAT6 717 aaPredicted RBP7.14□□□□□ -1.27
CCDC144B-206ENST00000609959 FDX2Q6P4F2 183 aa7.14□□□□□ -1.27
CCDC144B-206ENST00000609959 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.14□□□□□ -1.27
CCDC144B-206ENST00000609959 ARID1BQ8NFD5 2236 aaPredicted RBP7.14□□□□□ -1.27
CCDC144B-206ENST00000609959 SHKBP1Q8TBC3 707 aa7.14□□□□□ -1.27
CCDC144B-206ENST00000609959 H3BRJ5 948 aa7.13□□□□□ -1.27
CCDC144B-206ENST00000609959 FZD5Q13467 585 aa7.13□□□□□ -1.27
CCDC144B-206ENST00000609959 ABTB2Q8N961 1025 aa7.13□□□□□ -1.27
CCDC144B-206ENST00000609959 KLHDC7BQ96G42 594 aa7.13□□□□□ -1.27
CCDC144B-206ENST00000609959 ADAM19Q9H013 955 aa7.13□□□□□ -1.27
CCDC144B-206ENST00000609959 SAP130Q9H0E3 1048 aa7.13□□□□□ -1.27
CCDC144B-206ENST00000609959 SH2B1Q9NRF2 756 aaPredicted RBP7.13□□□□□ -1.27
CCDC144B-206ENST00000609959 ATG3Q9NT62 314 aa7.13□□□□□ -1.27
CCDC144B-206ENST00000609959 WDR64B1ANS9 1081 aa7.12□□□□□ -1.27
CCDC144B-206ENST00000609959 GAS2O43903 313 aaKnown RBP7.12□□□□□ -1.27
CCDC144B-206ENST00000609959 RPLP1P05386 114 aaKnown RBP7.12□□□□□ -1.27
CCDC144B-206ENST00000609959 EPHA1P21709 976 aa7.12□□□□□ -1.27
CCDC144B-206ENST00000609959 CDCA8Q53HL2 280 aa7.12□□□□□ -1.27
CCDC144B-206ENST00000609959 CFAP70Q5T0N1 1121 aa7.12□□□□□ -1.27
CCDC144B-206ENST00000609959 PDE12Q6L8Q7 609 aaKnown RBP7.12□□□□□ -1.27
CCDC144B-206ENST00000609959 CEP120Q8N960 986 aa7.12□□□□□ -1.27
CCDC144B-206ENST00000609959 GPR152Q8TDT2 470 aa7.12□□□□□ -1.27
CCDC144B-206ENST00000609959 FOXD4L4Q8WXT5 416 aaPredicted RBP7.12□□□□□ -1.27
CCDC144B-206ENST00000609959 RUSC1Q9BVN2 902 aa7.12□□□□□ -1.27
CCDC144B-206ENST00000609959 ANGEL1Q9UNK9 670 aaKnown RBP7.12□□□□□ -1.27
CCDC144B-206ENST00000609959 TM4SF5O14894 197 aa7.11□□□□□ -1.27
CCDC144B-206ENST00000609959 DDX3YO15523 660 aaKnown RBP7.11□□□□□ -1.27
CCDC144B-206ENST00000609959 ADAMTS4O75173 837 aa7.11□□□□□ -1.27
CCDC144B-206ENST00000609959 ELOAQ14241 798 aaKnown RBP7.11□□□□□ -1.27
CCDC144B-206ENST00000609959 UBASH3BQ8TF42 649 aa7.11□□□□□ -1.27
CCDC144B-206ENST00000609959 POP1Q99575 1024 aaKnown RBP7.11□□□□□ -1.27
CCDC144B-206ENST00000609959 PIM2Q9P1W9 311 aa7.11□□□□□ -1.27
CCDC144B-206ENST00000609959 STIM2Q9P246 746 aa7.11□□□□□ -1.27
CCDC144B-206ENST00000609959 ADAM11O75078 769 aa7.1□□□□□ -1.27
CCDC144B-206ENST00000609959 OCLNQ16625 522 aa7.1□□□□□ -1.27
CCDC144B-206ENST00000609959 CPSF6Q16630 551 aaKnown RBP eCLIP7.1□□□□□ -1.27
CCDC144B-206ENST00000609959 TMEM132AQ24JP5 1023 aa7.1□□□□□ -1.27
CCDC144B-206ENST00000609959 ADGRE2Q9UHX3 823 aa7.1□□□□□ -1.27
CCDC144B-206ENST00000609959 LEMD3Q9Y2U8 911 aa7.1□□□□□ -1.27
CCDC144B-206ENST00000609959 MEGF11A6BM72 1044 aa7.09□□□□□ -1.27
CCDC144B-206ENST00000609959 PREPP48147 710 aa7.09□□□□□ -1.27
CCDC144B-206ENST00000609959 NAA30Q147X3 362 aaPredicted RBP7.09□□□□□ -1.27
CCDC144B-206ENST00000609959 TTC16Q8NEE8 873 aa7.09□□□□□ -1.27
CCDC144B-206ENST00000609959 MFSD14AQ96MC6 490 aa7.09□□□□□ -1.27
CCDC144B-206ENST00000609959 ELP3Q9H9T3 547 aa7.09□□□□□ -1.27
CCDC144B-206ENST00000609959 TNFRSF10BO14763 440 aa7.08□□□□□ -1.28
CCDC144B-206ENST00000609959 PCSK2P16519 638 aa7.08□□□□□ -1.28
CCDC144B-206ENST00000609959 RXRBP28702 533 aa7.08□□□□□ -1.28
CCDC144B-206ENST00000609959 NLRP12P59046 1061 aa7.08□□□□□ -1.28
CCDC144B-206ENST00000609959 NUTM2GQ5VZR2 741 aa7.08□□□□□ -1.28
CCDC144B-206ENST00000609959 ZNF438Q7Z4V0 828 aa7.08□□□□□ -1.28
CCDC144B-206ENST00000609959 PMEPA1Q969W9 287 aa7.08□□□□□ -1.28
CCDC144B-206ENST00000609959 MKNK1Q9BUB5 465 aa7.08□□□□□ -1.28
CCDC144B-206ENST00000609959 OSBPL1AQ9BXW6 950 aa7.08□□□□□ -1.28
CCDC144B-206ENST00000609959 CXXC1Q9P0U4 656 aaPredicted RBP7.08□□□□□ -1.28
CCDC144B-206ENST00000609959 CYP2E1P05181 493 aaPredicted RBP7.07□□□□□ -1.28
CCDC144B-206ENST00000609959 MAP4P27816 1152 aaKnown RBP7.07□□□□□ -1.28
CCDC144B-206ENST00000609959 C19orf57Q0VDD7 668 aa7.07□□□□□ -1.28
CCDC144B-206ENST00000609959 SLC7A3Q8WY07 619 aa7.07□□□□□ -1.28
CCDC144B-206ENST00000609959 FBXL18Q96ME1 805 aa7.07□□□□□ -1.28
CCDC144B-206ENST00000609959 METTL22Q9BUU2 404 aaPredicted RBP7.07□□□□□ -1.28
CCDC144B-206ENST00000609959 CYP4F12Q9HCS2 524 aa7.07□□□□□ -1.28
CCDC144B-206ENST00000609959 PDE2AO00408 941 aaPredicted RBP7.06□□□□□ -1.28
CCDC144B-206ENST00000609959 EIF4EBP3O60516 100 aaPredicted RBP7.06□□□□□ -1.28
CCDC144B-206ENST00000609959 CES1P23141 567 aa7.06□□□□□ -1.28
CCDC144B-206ENST00000609959 FAM26DQ5JW98 314 aa7.06□□□□□ -1.28
CCDC144B-206ENST00000609959 C12orf50Q8NA57 414 aaPredicted RBP7.06□□□□□ -1.28
CCDC144B-206ENST00000609959 ZMYND15Q9H091 742 aa7.06□□□□□ -1.28
CCDC144B-206ENST00000609959 FOSL1P15407 271 aa7.05□□□□□ -1.28
CCDC144B-206ENST00000609959 PAOXQ6QHF9 649 aa7.05□□□□□ -1.28
CCDC144B-206ENST00000609959 ADAMTSL4Q6UY14 1074 aa7.05□□□□□ -1.28
CCDC144B-206ENST00000609959 FBXL6Q8N531 539 aa7.05□□□□□ -1.28
CCDC144B-206ENST00000609959 NUDT16Q96DE0 195 aaKnown RBP7.05□□□□□ -1.28
CCDC144B-206ENST00000609959 ASIC4Q96FT7 647 aa7.05□□□□□ -1.28
CCDC144B-206ENST00000609959 SALL4Q9UJQ4 1053 aa7.05□□□□□ -1.28
CCDC144B-206ENST00000609959 HOXA10P31260 410 aaPredicted RBP7.04□□□□□ -1.28
CCDC144B-206ENST00000609959 USP11P51784 963 aa7.04□□□□□ -1.28
CCDC144B-206ENST00000609959 FAM69CQ0P6D2 419 aa7.04□□□□□ -1.28
CCDC144B-206ENST00000609959 XKR5Q6UX68 686 aa7.04□□□□□ -1.28
CCDC144B-206ENST00000609959 ABI1Q8IZP0 508 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms